Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 19 869 XP_006713721 19 869 NP_597719 16 5631 NP_001036066 16 5631 NP_001275511 16 5631 XP_006713568 16 5631 XP_006713567 16 5631 NP_690043 16 7355 NP_000780 16 7355 NP_001171528 16 7355 NP_004941 16 7355 XP_006721800 16 7355 XP_005257167 16 7355 NP_001177636 15 9605 NP_667340 15 9605 NP_001121167 15 9605 NP_001161066 15 9605 NP_877576 15 9605 NP_000299 15 9605 XP_005265082 15 9605 XP_006713159 15 9605 XP_006713154 15 9605 XP_006713153 15 9605 XP_006713152 15 9605 XP_006713151 15 9605>NP_006209 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AYIRKALAL 9 AYIRK LAL Sbjct: 1020 AYIRKTLAL 1028>XP_006713721 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AYIRKALAL 9 AYIRK LAL Sbjct: 1020 AYIRKTLAL 1028>NP_597719 Length = 770 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AYIRKALAL 9 +Y +KALAL Sbjct: 403 SYYKKALAL 411>NP_001036066 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AYIRKALAL 9 +Y +KALAL Sbjct: 403 SYYKKALAL 411>NP_001275511 Length = 653 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AYIRKALAL 9 +Y +KALAL Sbjct: 403 SYYKKALAL 411>XP_006713568 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AYIRKALAL 9 +Y +KALAL Sbjct: 403 SYYKKALAL 411>XP_006713567 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AYIRKALAL 9 +Y +KALAL Sbjct: 403 SYYKKALAL 411>NP_690043 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AYIRKAL 7 AY+R+AL Sbjct: 280 AYVRRAL 286>NP_000780 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AYIRKAL 7 AY+R+AL Sbjct: 854 AYVRRAL 860>NP_001171528 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AYIRKAL 7 AY+R+AL Sbjct: 280 AYVRRAL 286>NP_004941 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YIRKAL 7 YIRKAL Sbjct: 286 YIRKAL 291>XP_006721800 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AYIRKAL 7 AY+R+AL Sbjct: 164 AYVRRAL 170>XP_005257167 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AYIRKAL 7 AY+R+AL Sbjct: 671 AYVRRAL 677>NP_001177636 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 673 YLRKALS 679>NP_667340 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 673 YLRKALS 679>NP_001121167 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YIRKAL 7 Y+RKAL Sbjct: 345 YVRKAL 350>NP_001161066 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YIRKAL 7 Y+RKAL Sbjct: 346 YVRKAL 351>NP_877576 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 20 YLRKALS 26>NP_000299 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YIRKAL 7 Y+RKAL Sbjct: 363 YVRKAL 368>XP_005265082 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 188 YLRKALS 194>XP_006713159 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 188 YLRKALS 194>XP_006713154 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 673 YLRKALS 679>XP_006713153 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 474 YLRKALS 480>XP_006713152 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 673 YLRKALS 679>XP_006713151 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIRKALA 8 Y+RKAL+ Sbjct: 673 YLRKALS 679Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.141 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 312,060 Number of extensions: 355 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |