Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 19 869 NP_066124 19 869 XP_006717999 19 869 NP_003256 17 4312 NP_001258523 17 4312 NP_001186862 17 4312 NP_055269 17 4312 NP_653266 17 4312 NP_001186863 17 4312 XP_006714357 17 4312 NP_001158238 16 7355 NP_207646 16 7355 NP_078997 16 7355 NP_008816 16 7355 XP_005256014 16 7355 XP_006720523 16 7355 XP_006720345 16 7355 XP_005268192 16 7355 XP_005268191 16 7355 NP_005735 16 7355 NP_055672 15 9605 NP_001273670 15 9605 NP_116296 15 9605 NP_001273668 15 9605 NP_001273671 15 9605 NP_001273669 15 9605 NP_957717 15 9605 NP_036329 15 9605 NP_065756 15 9605 NP_001186036 15 9605 NP_001122062 15 9605 NP_000491 15 9605 NP_001273283 15 9605 NP_683766 15 9605 NP_001273284 15 9605 NP_001182209 15 9605 NP_003239 15 9605 XP_006726140 15 9605 XP_006726139 15 9605 XP_006725960 15 9605 XP_006725959 15 9605 XP_006725536 15 9605 XP_006725535 15 9605 XP_005255506 15 9605 XP_006720970 15 9605 XP_006717095 15 9605 XP_006717094 15 9605 XP_005251923 15 9605 XP_006715065 15 9605 XP_006715064 15 9605 XP_006711756 15 9605 XP_005245738 15 9605 XP_006711755 15 9605 XP_005245737 15 9605>NP_065681 Length = 1072 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 A VLLLHFN Sbjct: 386 AGVLLLHFN 394>NP_066124 Length = 1114 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 A VLLLHFN Sbjct: 386 AGVLLLHFN 394>XP_006717999 Length = 1207 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 A VLLLHFN Sbjct: 479 AGVLLLHFN 487>NP_003256 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVLLLHF 8 +VLL+HF Sbjct: 719 IVLLIHF 725>NP_001258523 Length = 353 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 AVVLL H++ Sbjct: 54 AVVLLAHYH 62>NP_001186862 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 AVVLL H++ Sbjct: 202 AVVLLTHYH 210>NP_055269 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 AVVLL H++ Sbjct: 261 AVVLLTHYH 269>NP_653266 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 AVVLL H++ Sbjct: 193 AVVLLAHYH 201>NP_001186863 Length = 426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVVLLLHFN 9 AVVLL H++ Sbjct: 136 AVVLLTHYH 144>XP_006714357 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVLLLHF 8 +VLL+HF Sbjct: 719 IVLLIHF 725>NP_001158238 Length = 2789 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 645 ILLVHYN 651>NP_207646 Length = 2572 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 1205 ILLVHYN 1211>NP_078997 Length = 3616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 1555 ILLVHYN 1561>NP_008816 Length = 3703 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 1559 ILLVHYN 1565>XP_005256014 Length = 3702 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 1558 ILLVHYN 1564>XP_006720523 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VLLLHFN 9 +LL HFN Sbjct: 133 ILLSHFN 139>XP_006720345 Length = 1522 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 155 ILLVHYN 161>XP_005268192 Length = 1602 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 235 ILLVHYN 241>XP_005268191 Length = 2572 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLLLHFN 9 +LL+H+N Sbjct: 1205 ILLVHYN 1211>NP_005735 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VLLLHFN 9 +LL HFN Sbjct: 133 ILLSHFN 139>NP_055672 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 627 AAVLLLH 633>NP_001273670 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVVLLLH 7 A+VL+LH Sbjct: 228 AIVLVLH 234>NP_116296 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVVLLLH 7 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_001273668 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVVLLLH 7 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_001273671 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVVLLLH 7 A+VL+LH Sbjct: 228 AIVLVLH 234>NP_001273669 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVVLLLH 7 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_957717 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVVLLLH 7 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_036329 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 655 AAVLLLH 661>NP_065756 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVLLLHFN 9 V LLLH++ Sbjct: 138 VALLLHYS 145>NP_001186036 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVLLLHFN 9 V LLLH++ Sbjct: 138 VALLLHYS 145>NP_001122062 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 274 AVVFLLH 280>NP_000491 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 304 AVVFLLH 310>NP_001273283 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VVLLLHF 8 V+LL HF Sbjct: 460 VILLCHF 466>NP_683766 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VVLLLHF 8 V+LL HF Sbjct: 635 VILLCHF 641>NP_001273284 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VVLLLHF 8 V+LL HF Sbjct: 564 VILLCHF 570>NP_001182209 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VLLLHFN 9 +LLLH N Sbjct: 115 ILLLHHN 121>NP_003239 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 7 AAVLLLH 13>XP_006726140 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006726139 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 263 AVVFLLH 269>XP_006725960 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006725959 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 263 AVVFLLH 269>XP_006725536 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006725535 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 263 AVVFLLH 269>XP_005255506 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVLLLHFN 9 V LLLH++ Sbjct: 138 VALLLHYS 145>XP_006720970 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVLLLHFN 9 V LLLH++ Sbjct: 138 VALLLHYS 145>XP_006717095 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 486 AAVLLLH 492>XP_006717094 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 655 AAVLLLH 661>XP_005251923 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 655 AAVLLLH 661>XP_006715065 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006715064 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 AVV LLH Sbjct: 263 AVVFLLH 269>XP_006711756 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 627 AAVLLLH 633>XP_005245738 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 590 AAVLLLH 596>XP_006711755 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 627 AAVLLLH 633>XP_005245737 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVVLLLH 7 A VLLLH Sbjct: 627 AAVLLLH 633Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.153 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 507,269 Number of extensions: 741 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |