Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 175 XP_006718907 21 175 XP_006718906 21 175 XP_005271619 21 175 XP_005271618 21 175 NP_065881 17 3301 NP_001274121 17 4312 NP_001274120 17 4312 NP_001138785 17 4312 XP_005252317 17 4312 XP_005252314 17 4312 XP_005252313 17 4312 XP_005252311 17 4312 NP_000537 16 5631 NP_001263689 16 5631 NP_001119584 16 5631 NP_001119586 16 5631 NP_001263625 16 5631 NP_001119590 16 5631 NP_001263690 16 5631 NP_001119585 16 5631 NP_001263624 16 5631 NP_065734 16 5631 NP_001119588 16 5631 NP_001075445 16 5631 NP_001119587 16 5631 NP_001119589 16 5631 NP_001263627 16 5631 NP_001263628 16 5631 NP_001765 16 5631 NP_001263626 16 5631 NP_001035120 16 5631 XP_006723574 16 5631 XP_005259493 16 5631 XP_005259492 16 5631 XP_005270542 16 5631 NP_005027 16 7355 NP_001001928 16 7355 NP_443182 16 7355 NP_001264282 16 7355 XP_006724334 16 7355 XP_005261714 16 7355 XP_005261713 16 7355 XP_006724333 16 7355 XP_005261712 16 7355 XP_006724332 16 7355 XP_005261710 16 7355 NP_001191433 15 9605 NP_821077 15 9605 NP_001191435 15 9605 NP_001191434 15 9605 NP_690874 15 9605 NP_001243000 15 9605 NP_060466 15 9605 NP_001137546 15 9605 NP_077309 15 9605 NP_055058 15 9605 XP_005259701 15 9605 XP_006722949 15 9605 XP_005257603 15 9605 XP_006722058 15 9605 XP_005257602 15 9605 XP_005266328 15 9605 XP_006714565 15 9605 NP_001004467 15 9605>NP_000042 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVNFQIRVC 9 AVNF+IRVC Sbjct: 244 AVNFRIRVC 252>XP_006718907 Length = 3050 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVNFQIRVC 9 AVNF+IRVC Sbjct: 244 AVNFRIRVC 252>XP_006718906 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVNFQIRVC 9 AVNF+IRVC Sbjct: 244 AVNFRIRVC 252>XP_005271619 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVNFQIRVC 9 AVNF+IRVC Sbjct: 244 AVNFRIRVC 252>XP_005271618 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVNFQIRVC 9 AVNF+IRVC Sbjct: 244 AVNFRIRVC 252>NP_065881 Length = 410 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQIRVC 9 FQ+RVC Sbjct: 339 FQVRVC 344>NP_001274121 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF++R C Sbjct: 242 MNFRVRAC 249>NP_001274120 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF++R C Sbjct: 242 MNFRVRAC 249>NP_001138785 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF++R C Sbjct: 274 MNFRVRAC 281>XP_005252317 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF++R C Sbjct: 117 MNFRVRAC 124>XP_005252314 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF++R C Sbjct: 242 MNFRVRAC 249>XP_005252313 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF++R C Sbjct: 274 MNFRVRAC 281>XP_005252311 Length = 541 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF++R C Sbjct: 274 MNFRVRAC 281>NP_000537 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 269 SFEVRVC 275>NP_001263689 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 230 SFEVRVC 236>NP_001119584 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 269 SFEVRVC 275>NP_001119586 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 269 SFEVRVC 275>NP_001263625 Length = 302 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 230 SFEVRVC 236>NP_001119590 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 230 SFEVRVC 236>NP_001263690 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 230 SFEVRVC 236>NP_001119585 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 269 SFEVRVC 275>NP_001263624 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 230 SFEVRVC 236>NP_065734 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VNFQIRVC 9 ++FQ++VC Sbjct: 128 LSFQLKVC 135>NP_001119588 Length = 209 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 137 SFEVRVC 143>NP_001075445 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VNFQIRVC 9 ++FQ++VC Sbjct: 47 LSFQLKVC 54>NP_001119587 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 137 SFEVRVC 143>NP_001119589 Length = 214 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 137 SFEVRVC 143>NP_001263627 Length = 182 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 110 SFEVRVC 116>NP_001263628 Length = 187 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 110 SFEVRVC 116>NP_001765 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 V FQ+R C Sbjct: 146 VQFQLRCC 153>NP_001263626 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NFQIRVC 9 +F++RVC Sbjct: 110 SFEVRVC 116>NP_001035120 Length = 213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 V FQ+R C Sbjct: 78 VQFQLRCC 85>XP_006723574 Length = 213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 V FQ+R C Sbjct: 78 VQFQLRCC 85>XP_005259493 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 V FQ+R C Sbjct: 78 VQFQLRCC 85>XP_005259492 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 V FQ+R C Sbjct: 146 VQFQLRCC 153>XP_005270542 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VNFQIRVC 9 ++FQ++VC Sbjct: 128 LSFQLKVC 135>NP_005027 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>NP_001001928 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>NP_443182 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FQIRVC 9 F++RVC Sbjct: 339 FEVRVC 344>NP_001264282 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FQIRVC 9 FQ++VC Sbjct: 325 FQVKVC 330>XP_006724334 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>XP_005261714 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>XP_005261713 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>XP_006724333 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>XP_005261712 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>XP_006724332 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>XP_005261710 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AVNFQIRVC 9 A+N + R+C Sbjct: 97 ALNIECRIC 105>NP_001191433 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NFQIRVC 9 NF+I VC Sbjct: 382 NFRILVC 388>NP_821077 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NFQIRVC 9 NF+I VC Sbjct: 382 NFRILVC 388>NP_001191435 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NFQIRVC 9 NF+I VC Sbjct: 246 NFRILVC 252>NP_001191434 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NFQIRVC 9 NF+I VC Sbjct: 246 NFRILVC 252>NP_690874 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NFQIRVC 9 NF+I VC Sbjct: 382 NFRILVC 388>NP_001243000 Length = 5207 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +N+Q+R C Sbjct: 2222 LNYQLRDC 2229>NP_060466 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 VNF +R C Sbjct: 552 VNFHMRHC 559>NP_001137546 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 VNF +R C Sbjct: 541 VNFHMRHC 548>NP_077309 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF+++ C Sbjct: 242 MNFRVKAC 249>NP_055058 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 VNF+ ++C Sbjct: 593 VNFEYQLC 600>XP_005259701 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF+++ C Sbjct: 242 MNFRVKAC 249>XP_006722949 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +NF+++ C Sbjct: 242 MNFRVKAC 249>XP_005257603 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +N+Q+R C Sbjct: 2271 LNYQLRDC 2278>XP_006722058 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +N+Q+R C Sbjct: 2271 LNYQLRDC 2278>XP_005257602 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 +N+Q+R C Sbjct: 2271 LNYQLRDC 2278>XP_005266328 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NFQIRVC 9 NF+I VC Sbjct: 137 NFRILVC 143>XP_006714565 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VNFQIRVC 9 VN+++R C Sbjct: 453 VNYKVRRC 460>NP_001004467 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VNFQIRVC 9 +NF + VC Sbjct: 199 INFVVSVC 206Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.145 0.482 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,982 Number of extensions: 837 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |