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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000360                                                              19     869
XP_005268094                                                           19     869
NP_000224                                                              17    3301
NP_852111                                                              17    3301
NP_000136                                                              17    3301
XP_005264366                                                           17    3301
XP_006712078                                                           17    3301
NP_001268885                                                           16    7355
NP_443128                                                              16    7355
NP_899234                                                              16    7355
NP_003089                                                              15    9605
NP_000244                                                              15    9605
NP_005579                                                              15    9605
NP_963840                                                              15    9605
XP_005260574                                                           15    9605
XP_005263082                                                           15    9605
NP_001002911                                                           15    9605

>NP_000360
          Length = 764

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   AVLIFIDFI 9
           AVLIF DFI
Sbjct: 627 AVLIFTDFI 635



>XP_005268094
          Length = 764

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   AVLIFIDFI 9
           AVLIF DFI
Sbjct: 627 AVLIFTDFI 635



>NP_000224
          Length = 699

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   AVLIFIDF 8
           A+LIF DF
Sbjct: 572 AILIFTDF 579



>NP_852111
          Length = 669

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   AVLIFIDFI 9
           A+LIF DF+
Sbjct: 549 AMLIFTDFL 557



>NP_000136
          Length = 695

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   AVLIFIDFI 9
           A+LIF DF+
Sbjct: 575 AMLIFTDFL 583



>XP_005264366
          Length = 380

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   AVLIFIDF 8
           A+LIF DF
Sbjct: 253 AILIFTDF 260



>XP_006712078
          Length = 389

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   AVLIFIDF 8
           A+LIF DF
Sbjct: 262 AILIFTDF 269



>NP_001268885
          Length = 3631

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   LIFIDF 8
           L+FIDF
Sbjct: 282 LVFIDF 287



>NP_443128
          Length = 3487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   LIFIDF 8
           L+FIDF
Sbjct: 242 LVFIDF 247



>NP_899234
          Length = 1134

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   VLIFIDFI 9
           V+IF+D+I
Sbjct: 800 VMIFLDWI 807



>NP_003089
          Length = 505

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AVLIFIDF 8
           A L+F+DF
Sbjct: 461 ASLLFLDF 468



>NP_000244
          Length = 894

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AVLIFIDF 8
           A+L F+DF
Sbjct: 374 AILDFLDF 381



>NP_005579
          Length = 746

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 2   VLIFIDF 8
           ++IF+DF
Sbjct: 587 LIIFVDF 593



>NP_963840
          Length = 449

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   LIFIDF 8
           L+F+DF
Sbjct: 185 LVFVDF 190



>XP_005260574
          Length = 504

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AVLIFIDF 8
           A L+F+DF
Sbjct: 461 ASLLFLDF 468



>XP_005263082
          Length = 921

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AVLIFIDF 8
           A+L F+DF
Sbjct: 401 AILDFLDF 408



>NP_001002911
          Length = 353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/7 (42%), Positives = 7/7 (100%)

Query: 3  LIFIDFI 9
          ++F+DF+
Sbjct: 80 IVFVDFL 86



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.362    0.178    0.505 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 375,912
Number of extensions: 535
Number of successful extensions: 17
Number of sequences better than 10000.0: 17
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 17
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (17.1 bits)
S2: 28 (15.4 bits)