Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 509 XP_006714104 20 509 XP_005265800 20 509 XP_006714103 20 509 XP_006714102 20 509 NP_001273188 17 3301 NP_872309 17 3301 NP_056009 16 5631 XP_006726589 16 5631 XP_006718462 16 5631 XP_006710010 16 5631 NP_000328 16 7355 NP_005474 16 7355 NP_001121681 16 7355 NP_758447 16 7355 NP_003882 16 7355 NP_001243063 16 7355 NP_003256 16 7355 NP_060267 16 7355 XP_005266024 16 7355 XP_006714975 16 7355 XP_006714974 16 7355 XP_005266023 16 7355 XP_005266022 16 7355 XP_006714357 16 7355 NP_443723 15 9605 NP_001138501 15 9605 NP_542195 15 9605 NP_001104595 15 9605 NP_003096 15 9605 XP_006724647 15 9605 XP_006724646 15 9605 XP_006724645 15 9605 XP_006724644 15 9605 XP_006724643 15 9605 XP_006724642 15 9605 XP_006722388 15 9605 XP_006717590 15 9605 XP_006710476 15 9605 XP_006710474 15 9605 NP_055890 15 9605>NP_006197 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFNNEVV 8 AVFNNEVV Sbjct: 236 AVFNNEVV 243>XP_006714104 Length = 832 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFNNEVV 8 AVFNNEVV Sbjct: 261 AVFNNEVV 268>XP_005265800 Length = 1089 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFNNEVV 8 AVFNNEVV Sbjct: 236 AVFNNEVV 243>XP_006714103 Length = 1111 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFNNEVV 8 AVFNNEVV Sbjct: 258 AVFNNEVV 265>XP_006714102 Length = 1114 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFNNEVV 8 AVFNNEVV Sbjct: 261 AVFNNEVV 268>NP_001273188 Length = 144 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 V+NNEVV Sbjct: 2 VYNNEVV 8>NP_872309 Length = 191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 V+NNEVV Sbjct: 49 VYNNEVV 55>NP_056009 Length = 1006 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 FNNEVVV 9 FNN+++V Sbjct: 436 FNNQIIV 442>XP_006726589 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 +FNN+VV Sbjct: 291 IFNNKVV 297>XP_006718462 Length = 4966 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 +FNN+VV Sbjct: 4316 IFNNKVV 4322>XP_006710010 Length = 1103 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 +FNN+VV Sbjct: 512 IFNNKVV 518>NP_000328 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 154 NNEVVV 159>NP_005474 Length = 956 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VFNNEVVV 9 +FN++VV+ Sbjct: 532 IFNSDVVI 539>NP_001121681 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 153 NNEVVV 158>NP_758447 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 154 NNEVVV 159>NP_003882 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VFNNEVV 8 VF NEVV Sbjct: 71 VFENEVV 77>NP_001243063 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VFNNEVV 8 VF NEVV Sbjct: 93 VFENEVV 99>NP_003256 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVFNNEV 7 +VFNN+V Sbjct: 604 SVFNNQV 610>NP_060267 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 +FNNEV+ Sbjct: 110 LFNNEVL 116>XP_005266024 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 154 NNEVVV 159>XP_006714975 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 154 NNEVVV 159>XP_006714974 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 154 NNEVVV 159>XP_005266023 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 154 NNEVVV 159>XP_005266022 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NNEVVV 9 NNEVVV Sbjct: 154 NNEVVV 159>XP_006714357 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVFNNEV 7 +VFNN+V Sbjct: 604 SVFNNQV 610>NP_443723 Length = 1341 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 ++NNEV+ Sbjct: 1187 IYNNEVL 1193>NP_001138501 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 ++NNEV+ Sbjct: 1223 IYNNEVL 1229>NP_542195 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNNEV+ Sbjct: 193 FNNEVL 198>NP_001104595 Length = 1488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 747 FNNDVV 752>NP_003096 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AVFNNEV 7 AVF NE+ Sbjct: 967 AVFKNEI 973>XP_006724647 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 779 FNNDVV 784>XP_006724646 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 779 FNNDVV 784>XP_006724645 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 779 FNNDVV 784>XP_006724644 Length = 1244 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 779 FNNDVV 784>XP_006724643 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 542 FNNDVV 547>XP_006724642 Length = 1520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 779 FNNDVV 784>XP_006722388 Length = 1511 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 ++NNEV+ Sbjct: 1342 IYNNEVL 1348>XP_006717590 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VFNNEVV 8 ++NNEV+ Sbjct: 1243 IYNNEVL 1249>XP_006710476 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AVFNNEVV 8 A+ NNE++ Sbjct: 11 ALLNNEII 18>XP_006710474 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AVFNNEVV 8 A+ NNE++ Sbjct: 11 ALLNNEII 18>NP_055890 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FNNEVV 8 FNN+VV Sbjct: 542 FNNDVV 547Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.135 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 463,935 Number of extensions: 541 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |