Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 390 NP_000170 20 390 NP_001268422 20 390 NP_001268423 20 390 XP_005264328 20 390 NP_001061 17 3301 NP_001177738 17 3301 XP_005257280 17 3301 XP_005257279 17 3301 NP_068750 17 3301 NP_057521 17 3301 NP_003296 17 4312 NP_001124170 17 4312 NP_001095871 17 4312 NP_001252510 17 4312 NP_079391 17 4312 NP_644812 17 4312 XP_005273773 17 4312 XP_006714359 17 4312 XP_006714358 17 4312 NP_061485 16 5631 NP_008839 16 5631 NP_055558 16 5631 NP_001094060 16 5631 NP_002863 16 5631 NP_065713 16 5631 NP_001273195 16 5631 NP_001273194 16 5631 XP_006724349 16 5631 XP_005256447 16 5631 XP_005249299 16 5631 XP_005248098 16 5631 XP_006713998 16 5631 XP_006713997 16 5631 NP_005043 16 5631 NP_001244336 16 7355 NP_000409 16 7355 NP_001360 16 7355 NP_001243342 16 7355 NP_001244926 16 7355 NP_001035196 16 7355 NP_001244335 16 7355 NP_115745 16 7355 NP_775491 16 7355 XP_006726609 16 7355 XP_005255366 16 7355 XP_005255362 16 7355 XP_006719787 16 7355 XP_005254006 16 7355 XP_006719703 16 7355 XP_005254005 16 7355 XP_005248319 16 7355 XP_006710027 16 7355 NP_003766 16 7355 NP_001128570 16 7355 NP_001596 15 9605 NP_066940 15 9605 XP_006721216 15 9605 NP_665872 15 9605>NP_001268421 Length = 1230 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 AVECI VLD Sbjct: 920 AVECIAVLD 928>NP_000170 Length = 1360 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 AVECI VLD Sbjct: 1050 AVECIAVLD 1058>NP_001268422 Length = 1058 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 AVECI VLD Sbjct: 748 AVECIAVLD 756>NP_001268423 Length = 1058 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 AVECI VLD Sbjct: 748 AVECIAVLD 756>XP_005264328 Length = 1261 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 AVECI VLD Sbjct: 951 AVECIAVLD 959>NP_001061 Length = 451 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 +C+VVLD Sbjct: 200 DCVVVLD 206>NP_001177738 Length = 672 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AVECIVVL 8 A+EC+VV+ Sbjct: 342 AIECLVVV 349>XP_005257280 Length = 298 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 +C+VVLD Sbjct: 47 DCVVVLD 53>XP_005257279 Length = 460 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 +C+VVLD Sbjct: 209 DCVVVLD 215>NP_068750 Length = 703 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AVECIVVL 8 A+EC+VV+ Sbjct: 373 AIECLVVV 380>NP_057521 Length = 451 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 +C+VVLD Sbjct: 200 DCVVVLD 206>NP_003296 Length = 848 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AVECIVVL 8 A++C+VVL Sbjct: 347 AIKCLVVL 354>NP_001124170 Length = 921 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AVECIVVL 8 A++C+VVL Sbjct: 420 AIKCLVVL 427>NP_001095871 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A +C+++LD Sbjct: 458 ATDCLILLD 466>NP_001252510 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A +C+++LD Sbjct: 458 ATDCLILLD 466>NP_079391 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A +C+++LD Sbjct: 458 ATDCLILLD 466>NP_644812 Length = 304 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 CIVVLD Sbjct: 140 CIVVLD 145>XP_005273773 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 CIVVLD Sbjct: 398 CIVVLD 403>XP_006714359 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AVECIVVL 8 A++C+VVL Sbjct: 347 AIKCLVVL 354>XP_006714358 Length = 820 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AVECIVVL 8 A++C+VVL Sbjct: 347 AIKCLVVL 354>NP_061485 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A++C+VV D Sbjct: 3 AIKCVVVGD 11>NP_008839 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A++C+VV D Sbjct: 3 AIKCVVVGD 11>NP_055558 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC +VLD Sbjct: 550 ECCIVLD 556>NP_001094060 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC +VLD Sbjct: 550 ECCIVLD 556>NP_002863 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A++C+VV D Sbjct: 3 AIKCVVVGD 11>NP_065713 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 EC+++LD Sbjct: 147 ECLLILD 153>NP_001273195 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 EC+++LD Sbjct: 97 ECLLILD 103>NP_001273194 Length = 408 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 EC+++LD Sbjct: 147 ECLLILD 153>XP_006724349 Length = 161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A++C+VV D Sbjct: 3 AIKCVVVGD 11>XP_005256447 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A++C+VV D Sbjct: 3 AIKCVVVGD 11>XP_005249299 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ECIVVLD 9 EC+++LD Sbjct: 147 ECLLILD 153>XP_005248098 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC +VLD Sbjct: 441 ECCIVLD 447>XP_006713998 Length = 1332 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC +VLD Sbjct: 550 ECCIVLD 556>XP_006713997 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC +VLD Sbjct: 550 ECCIVLD 556>NP_005043 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AVECIVVLD 9 A++C+VV D Sbjct: 3 AIKCVVVGD 11>NP_001244336 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVECIVVL 8 +V CIV+L Sbjct: 223 SVSCIVIL 230>NP_000409 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVECIVVL 8 +V CIV+L Sbjct: 238 SVSCIVIL 245>NP_001360 Length = 4624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AVECIV 6 AVECI+ Sbjct: 1037 AVECII 1042>NP_001243342 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 C+VVLD Sbjct: 87 CLVVLD 92>NP_001244926 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVECIVVL 8 +V CIV+L Sbjct: 78 SVSCIVIL 85>NP_001035196 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 C+VVLD Sbjct: 107 CLVVLD 112>NP_001244335 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVECIVVL 8 +V CIV+L Sbjct: 238 SVSCIVIL 245>NP_115745 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 C+VVLD Sbjct: 107 CLVVLD 112>NP_775491 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVECIVVLD 9 AV C+ +LD Sbjct: 272 AVVCVTLLD 280>XP_006726609 Length = 2838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VECIVVL 8 ++CIVVL Sbjct: 1176 IKCIVVL 1182>XP_005255366 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVECIVVL 8 +V CIV+L Sbjct: 298 SVSCIVIL 305>XP_005255362 Length = 885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVECIVVL 8 +V CIV+L Sbjct: 298 SVSCIVIL 305>XP_006719787 Length = 2838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VECIVVL 8 ++CIVVL Sbjct: 1176 IKCIVVL 1182>XP_005254006 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 C+VVLD Sbjct: 70 CLVVLD 75>XP_006719703 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 C+VVLD Sbjct: 107 CLVVLD 112>XP_005254005 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CIVVLD 9 C+VVLD Sbjct: 107 CLVVLD 112>XP_005248319 Length = 4609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AVECIV 6 AVECI+ Sbjct: 1022 AVECII 1027>XP_006710027 Length = 2837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VECIVVL 8 ++CIVVL Sbjct: 1175 IKCIVVL 1181>NP_003766 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVECIVVLD 9 A C+VVL+ Sbjct: 55 AASCLVVLE 63>NP_001128570 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVECIVVLD 9 AV C+ +LD Sbjct: 329 AVVCVTLLD 337>NP_001596 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC VVLD Sbjct: 524 ECGVVLD 530>NP_066940 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VECIVVLD 9 V C+ +LD Sbjct: 71 VRCVYILD 78>XP_006721216 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC VVLD Sbjct: 524 ECGVVLD 530>NP_665872 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 ECIVVLD 9 EC+ +LD Sbjct: 112 ECVALLD 118Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.147 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 600,729 Number of extensions: 957 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |