Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1935 NP_001035957 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 NP_003881 17 4312 NP_940849 17 4312 NP_079236 16 5631 NP_705902 16 5631 NP_705904 16 5631 NP_001257449 16 5631 NP_055807 16 5631 NP_683878 16 5631 NP_683879 16 5631 NP_001096654 16 5631 NP_001264242 16 5631 NP_835260 16 5631 NP_919278 16 5631 NP_078870 16 5631 XP_006723694 16 5631 XP_005260892 16 5631 XP_005260893 16 5631 XP_005267488 16 5631 XP_005267487 16 5631 XP_006714522 16 5631 XP_006714521 16 5631 XP_006714520 16 5631 XP_005248327 16 5631 XP_005248326 16 5631 XP_006714519 16 5631 XP_006712459 16 5631 NP_002145 16 7355 NP_003477 16 7355 NP_001264044 16 7355 NP_055093 16 7355 NP_001138868 16 7355 NP_699160 16 7355 NP_005883 16 7355 XP_006722133 16 7355 XP_006722132 16 7355 XP_006722131 16 7355 XP_006722130 16 7355 XP_006722129 16 7355 XP_006722128 16 7355 XP_006722127 16 7355 XP_006722126 16 7355 XP_006722125 16 7355 XP_006721350 16 7355 XP_006721349 16 7355 XP_006714203 16 7355 NP_055495 15 9605 NP_001399 15 9605 XP_005258130 15 9605 XP_006710468 15 9605 XP_005270637 15 9605>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2014 AVALASGNV 2022>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2035 AVALASGNV 2043>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2045 AVALASGNV 2053>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2045 AVALASGNV 2053>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2014 AVALASGNV 2022>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2024 AVALASGNV 2032>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2045 AVALASGNV 2053>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2032 AVALASGNV 2040>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2035 AVALASGNV 2043>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVALA GNV Sbjct: 2045 AVALASGNV 2053>NP_003881 Length = 5405 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 A ALAFGN Sbjct: 1023 ANALAFGN 1030>NP_940849 Length = 132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 +V LAFGN+ Sbjct: 32 SVLLAFGNL 40>NP_079236 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 176 AVASSFGNM 184>NP_705902 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 467 AVASSFGNM 475>NP_705904 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 176 AVASSFGNM 184>NP_001257449 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 V LAFGN Sbjct: 806 VVLAFGN 812>NP_055807 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 V LAFGN Sbjct: 816 VVLAFGN 822>NP_683878 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 492 AVASSFGNM 500>NP_683879 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 267 AVASSFGNM 275>NP_001096654 Length = 1196 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 A+ LAFGN Sbjct: 959 ALILAFGN 966>NP_001264242 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 A+ LAFGN Sbjct: 1182 ALILAFGN 1189>NP_835260 Length = 2839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 V L+FGN+ Sbjct: 83 VGLSFGNI 90>NP_919278 Length = 1925 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LAFGNV 9 LAFGNV Sbjct: 999 LAFGNV 1004>NP_078870 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 267 AVASSFGNM 275>XP_006723694 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 176 AVASSFGNM 184>XP_005260892 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 262 AVASSFGNM 270>XP_005260893 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVALAFGNV 9 AVA +FGN+ Sbjct: 317 AVASSFGNM 325>XP_005267488 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 V LAFGN Sbjct: 816 VVLAFGN 822>XP_005267487 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 V LAFGN Sbjct: 816 VVLAFGN 822>XP_006714522 Length = 2719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 V L+FGN+ Sbjct: 83 VGLSFGNI 90>XP_006714521 Length = 2781 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 V L+FGN+ Sbjct: 83 VGLSFGNI 90>XP_006714520 Length = 2802 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 V L+FGN+ Sbjct: 83 VGLSFGNI 90>XP_005248327 Length = 2839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 V L+FGN+ Sbjct: 83 VGLSFGNI 90>XP_005248326 Length = 2873 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 V L+FGN+ Sbjct: 83 VGLSFGNI 90>XP_006714519 Length = 2873 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 V L+FGN+ Sbjct: 83 VGLSFGNI 90>XP_006712459 Length = 1914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LAFGNV 9 LAFGNV Sbjct: 988 LAFGNV 993>NP_002145 Length = 840 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVALAFG 7 AVALA+G Sbjct: 176 AVALAYG 182>NP_003477 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 AVA+ FGN Sbjct: 310 AVAVDFGN 317>NP_001264044 Length = 4516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALAFGNV 9 ALAFG+V Sbjct: 3531 ALAFGDV 3537>NP_055093 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVALAFG 7 AVALA+G Sbjct: 176 AVALAYG 182>NP_001138868 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 A ALA+GN Sbjct: 631 APALAYGN 638>NP_699160 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 A ALA+GN Sbjct: 682 APALAYGN 689>NP_005883 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 840 IVLAFGN 846>XP_006722133 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 840 IVLAFGN 846>XP_006722132 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 846 IVLAFGN 852>XP_006722131 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 840 IVLAFGN 846>XP_006722130 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 846 IVLAFGN 852>XP_006722129 Length = 1110 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 846 IVLAFGN 852>XP_006722128 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 830 IVLAFGN 836>XP_006722127 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 836 IVLAFGN 842>XP_006722126 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 840 IVLAFGN 846>XP_006722125 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VALAFGN 8 + LAFGN Sbjct: 846 IVLAFGN 852>XP_006721350 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 AVA+ FGN Sbjct: 44 AVAVDFGN 51>XP_006721349 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVALAFGN 8 AVA+ FGN Sbjct: 137 AVAVDFGN 144>XP_006714203 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVALAFG 7 AVALA+G Sbjct: 176 AVALAYG 182>NP_055495 Length = 2235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VALAFGNV 9 VAL FG V Sbjct: 86 VALCFGEV 93>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 VAL FG+V Sbjct: 1491 VALRFGSV 1498>XP_005258130 Length = 2234 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VALAFGNV 9 VAL FG V Sbjct: 86 VALCFGEV 93>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 VAL FG+V Sbjct: 1491 VALRFGSV 1498>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VALAFGNV 9 VAL FG+V Sbjct: 1491 VALRFGSV 1498Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.137 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 374,316 Number of extensions: 394 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |