Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_002010 18 1935 NP_002600 17 4312 NP_005537 17 4312 XP_005268521 17 4312 NP_037361 16 5631 NP_863651 16 5631 NP_001151 16 5631 NP_863658 16 5631 NP_001035022 16 5631 NP_000617 16 5631 NP_570138 16 5631 NP_689618 16 7355 NP_001094387 16 7355 XP_005268726 16 7355 XP_006719313 16 7355 XP_006714593 16 7355 XP_005248487 16 7355 NP_002218 15 9605 NP_001153839 15 9605 NP_443714 15 9605 NP_001092003 15 9605 NP_443713 15 9605 NP_002106 15 9605 XP_006721381 15 9605 XP_006721380 15 9605 XP_006721379 15 9605 XP_006721378 15 9605 XP_006721377 15 9605 XP_006721376 15 9605 XP_006721375 15 9605 XP_006721374 15 9605 XP_006721373 15 9605 XP_006721372 15 9605 XP_006721371 15 9605 XP_005268438 15 9605 XP_005270898 15 9605 XP_006710687 15 9605 NP_001025040 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATSEVYQIM 9 ATSEVY+IM Sbjct: 921 ATSEVYEIM 929>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATSEVYQIM 9 ATSEVY+IM Sbjct: 921 ATSEVYEIM 929>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATSEVYQIM 9 ATSEVY+IM Sbjct: 943 ATSEVYEIM 951>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ATSEVYQIM 9 ATSEVY+IM Sbjct: 946 ATSEVYEIM 954>NP_002010 Length = 1338 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ATSEVYQIM 9 +T E+YQIM Sbjct: 1125 STPEIYQIM 1133>NP_002600 Length = 1106 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATSEVYQIM 9 A+ E+Y+IM Sbjct: 929 ASDEIYEIM 937>NP_005537 Length = 620 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ATSEVYQIM 9 A++ VYQIM Sbjct: 583 ASTHVYQIM 591>XP_005268521 Length = 1042 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATSEVYQIM 9 A+ E+Y+IM Sbjct: 865 ASDEIYEIM 873>NP_037361 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSEVYQ 7 TSEVYQ Sbjct: 562 TSEVYQ 567>NP_863651 Length = 1248 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSEVYQ 7 TSEVYQ Sbjct: 573 TSEVYQ 578>NP_001151 Length = 1194 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSEVYQ 7 TSEVYQ Sbjct: 562 TSEVYQ 567>NP_863658 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSEVYQ 7 TSEVYQ Sbjct: 573 TSEVYQ 578>NP_001035022 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSEVYQ 7 TSEVYQ Sbjct: 130 TSEVYQ 135>NP_000617 Length = 229 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSEVYQ 7 TSEVYQ Sbjct: 129 TSEVYQ 134>NP_570138 Length = 235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ATSEVYQIM 9 A S VYQ+M Sbjct: 176 AQSRVYQLM 184>NP_689618 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATSEVYQIM 9 AT+E+YQ + Sbjct: 375 ATTELYQYL 383>NP_001094387 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSEV+Q+ Sbjct: 224 TSEVFQV 230>XP_005268726 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSEV+Q+ Sbjct: 224 TSEVFQV 230>XP_006719313 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSEV+Q+ Sbjct: 235 TSEVFQV 241>XP_006714593 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATSEVYQIM 9 AT+E+YQ + Sbjct: 375 ATTELYQYL 383>XP_005248487 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ATSEVYQIM 9 AT+E+YQ + Sbjct: 375 ATTELYQYL 383>NP_002218 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVYQIM 9 EVYQ+M Sbjct: 1123 EVYQLM 1128>NP_001153839 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>NP_443714 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 242 TSEIHQI 248>NP_001092003 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>NP_443713 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>NP_002106 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TSEVYQI 8 TSE+Y I Sbjct: 562 TSEIYSI 568>XP_006721381 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>XP_006721380 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>XP_006721379 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>XP_006721378 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>XP_006721377 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>XP_006721376 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 171 TSEIHQI 177>XP_006721375 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 195 TSEIHQI 201>XP_006721374 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 205 TSEIHQI 211>XP_006721373 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 242 TSEIHQI 248>XP_006721372 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 236 TSEIHQI 242>XP_006721371 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TSE++QI Sbjct: 242 TSEIHQI 248>XP_005268438 Length = 157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TS+VY+I Sbjct: 140 TSQVYEI 146>XP_005270898 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVYQIM 9 EVYQ+M Sbjct: 1123 EVYQLM 1128>XP_006710687 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVYQIM 9 EVYQ+M Sbjct: 1123 EVYQLM 1128>NP_001025040 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TSEVYQI 8 TS+VY+I Sbjct: 160 TSQVYEI 166Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.118 0.288 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 367,606 Number of extensions: 381 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |