Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 20 509 NP_066124 20 509 XP_006717999 20 509 NP_005474 17 3301 NP_075060 16 5631 NP_005531 16 5631 NP_612372 16 5631 XP_006722230 16 5631 XP_006722229 16 5631 XP_005257838 16 5631 XP_005257837 16 5631 XP_005257836 16 5631 XP_005257835 16 5631 XP_005257834 16 5631 XP_006710684 16 5631 XP_006710683 16 5631 XP_006710682 16 5631 XP_005270893 16 5631 XP_005270892 16 5631 XP_005270890 16 5631 NP_001245344 16 7355 NP_065860 16 7355 NP_001245347 16 7355 NP_001245346 16 7355 NP_001245345 16 7355 NP_056453 16 7355 NP_008896 16 7355 NP_955400 16 7355 XP_005258399 16 7355 XP_005258398 16 7355 XP_005271685 16 7355 XP_006718956 16 7355 XP_006718871 16 7355 NP_835228 16 7355 NP_060264 15 9605 NP_003622 15 9605 NP_001258978 15 9605 NP_057376 15 9605 XP_005251551 15 9605 XP_006716857 15 9605>NP_065681 Length = 1072 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SLDSMENQ 9 SLDSMENQ Sbjct: 696 SLDSMENQ 703>NP_066124 Length = 1114 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SLDSMENQ 9 SLDSMENQ Sbjct: 696 SLDSMENQ 703>XP_006717999 Length = 1207 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SLDSMENQ 9 SLDSMENQ Sbjct: 789 SLDSMENQ 796>NP_005474 Length = 956 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ASLDSMEN 8 ASLD++EN Sbjct: 70 ASLDTLEN 77>NP_075060 Length = 247 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 186 LDSMEN 191>NP_005531 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLD MEN Sbjct: 578 SLDKMEN 584>NP_612372 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 729 LDSMEN 734>XP_006722230 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 517 LDSMEN 522>XP_006722229 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 517 LDSMEN 522>XP_005257838 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 565 LDSMEN 570>XP_005257837 Length = 658 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 565 LDSMEN 570>XP_005257836 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 729 LDSMEN 734>XP_005257835 Length = 869 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 777 LDSMEN 782>XP_005257834 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LDSMEN 8 LDSMEN Sbjct: 777 LDSMEN 782>XP_006710684 Length = 794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLD MEN Sbjct: 459 SLDKMEN 465>XP_006710683 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLD MEN Sbjct: 358 SLDKMEN 364>XP_006710682 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLD MEN Sbjct: 385 SLDKMEN 391>XP_005270893 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLD MEN Sbjct: 414 SLDKMEN 420>XP_005270892 Length = 801 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLD MEN Sbjct: 578 SLDKMEN 584>XP_005270890 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLD MEN Sbjct: 576 SLDKMEN 582>NP_001245344 Length = 1168 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 +S DS+EN+ Sbjct: 560 SSYDSLENE 568>NP_065860 Length = 1191 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 +S DS+EN+ Sbjct: 583 SSYDSLENE 591>NP_001245347 Length = 1155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 +S DS+EN+ Sbjct: 547 SSYDSLENE 555>NP_001245346 Length = 1155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 +S DS+EN+ Sbjct: 547 SSYDSLENE 555>NP_001245345 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 +S DS+EN+ Sbjct: 557 SSYDSLENE 565>NP_056453 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SLDSMENQ 9 SLD ENQ Sbjct: 634 SLDRFENQ 641>NP_008896 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 + LD++ENQ Sbjct: 167 SELDAVENQ 175>NP_955400 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SLDSMENQ 9 SLD ENQ Sbjct: 626 SLDRFENQ 633>XP_005258399 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 + LD++ENQ Sbjct: 167 SELDAVENQ 175>XP_005258398 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 + LD++ENQ Sbjct: 167 SELDAVENQ 175>XP_005271685 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 +S DS+EN+ Sbjct: 126 SSYDSLENE 134>XP_006718956 Length = 1191 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 +S DS+EN+ Sbjct: 583 SSYDSLENE 591>XP_006718871 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLDSMENQ 9 ASLD + NQ Sbjct: 107 ASLDYLSNQ 115>NP_835228 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ASLDSMENQ 9 ASLD + NQ Sbjct: 107 ASLDYLSNQ 115>NP_060264 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLDSMEN 8 SLD++EN Sbjct: 1120 SLDALEN 1126>NP_003622 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLDSMEN 8 SLDS EN Sbjct: 95 SLDSKEN 101>NP_001258978 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 A LD+++NQ Sbjct: 129 AFLDALQNQ 137>NP_057376 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ASLDSMENQ 9 A LD+++NQ Sbjct: 182 AFLDALQNQ 190>XP_005251551 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLDSMEN 8 SLD++EN Sbjct: 1120 SLDALEN 1126>XP_006716857 Length = 1834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SLDSMEN 8 SLD++EN Sbjct: 1153 SLDALEN 1159Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.103 0.236 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 494,281 Number of extensions: 886 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |