Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 18 1135 NP_001277143 18 1135 NP_001319 18 1135 NP_001012632 18 1135 NP_001077383 18 1135 NP_001320 18 1135 NP_073713 18 1135 XP_005269629 18 1135 XP_005269628 18 1135 XP_005269627 18 1135 XP_005269626 18 1135 XP_006717706 18 1135 XP_005269625 18 1135 XP_005269624 18 1135 XP_006717705 18 1135 XP_005269622 18 1135 XP_005269621 18 1135 XP_006717704 18 1135 XP_005269619 18 1135 XP_005269618 18 1135 XP_005272320 18 1135 XP_005272319 18 1135 XP_005272318 18 1135 NP_079023 17 4312 XP_006726469 17 4312 XP_006713516 17 4312 NP_689539 16 5631 NP_003123 16 5631 XP_005267368 16 5631 XP_005267367 16 5631 NP_817123 16 7355 NP_001127925 16 7355 NP_848927 15 9605 NP_001273579 15 9605 NP_000659 15 9605 NP_000660 15 9605 NP_056013 15 9605 NP_001274365 15 9605 NP_000658 15 9605 XP_005251157 15 9605 XP_005251156 15 9605 XP_005251155 15 9605 XP_005271814 15 9605 XP_005271813 15 9605 XP_006715738 15 9605 XP_005271810 15 9605 XP_005271809 15 9605 XP_005271808 15 9605 XP_005271807 15 9605 XP_005262788 15 9605 XP_006714142 15 9605 XP_005263617 15 9605 XP_005263616 15 9605 XP_005263612 15 9605 XP_005263611 15 9605 XP_005263610 15 9605 XP_005263609 15 9605 XP_005263608 15 9605 XP_005263607 15 9605 NP_001095940 15 9605 NP_000663 15 9605>NP_001277144 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>NP_001277143 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>NP_001319 Length = 440 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 166 ASGAARIR 173>NP_001012632 Length = 429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 155 ASGAARIR 162>NP_001077383 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>NP_001320 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>NP_073713 Length = 985 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 712 ASGAARIR 719>XP_005269629 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269628 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269627 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269626 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_006717706 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269625 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269624 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_006717705 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269622 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269621 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_006717704 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269619 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005269618 Length = 445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 172 ASGAARIR 179>XP_005272320 Length = 430 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 155 ASGAARIR 162>XP_005272319 Length = 430 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 155 ASGAARIR 162>XP_005272318 Length = 441 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ASGAARIR 8 ASGAARIR Sbjct: 166 ASGAARIR 173>NP_079023 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GAARIRE 9 GAAR+RE Sbjct: 18 GAARLRE 24>XP_006726469 Length = 175 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 ASGAAR R Sbjct: 79 ASGAARAR 86>XP_006713516 Length = 263 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 ASGAAR R Sbjct: 167 ASGAARAR 174>NP_689539 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 ASGAAR R Sbjct: 18 ASGAARSR 25>NP_003123 Length = 302 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ASGAARIRE 9 ASG A IRE Sbjct: 10 ASGPAAIRE 18>XP_005267368 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 ASGAAR R Sbjct: 18 ASGAARSR 25>XP_005267367 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 ASGAAR R Sbjct: 18 ASGAARSR 25>NP_817123 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 ASGAAR R Sbjct: 752 ASGAARKR 759>NP_001127925 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 ASGAAR R Sbjct: 771 ASGAARKR 778>NP_848927 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GAARIRE 9 G+AR+RE Sbjct: 17 GSARLRE 23>NP_001273579 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 174 AAGAARI 180>NP_000659 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 214 AAGAARI 220>NP_000660 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 214 AAGAARI 220>NP_056013 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1249 TGAARLRK 1256>NP_001274365 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1259 TGAARLRK 1266>NP_000658 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 214 AAGAARI 220>XP_005251157 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GAARIRE 9 G+AR+RE Sbjct: 17 GSARLRE 23>XP_005251156 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GAARIRE 9 G+AR+RE Sbjct: 17 GSARLRE 23>XP_005251155 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GAARIRE 9 G+AR+RE Sbjct: 17 GSARLRE 23>XP_005271814 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1035 TGAARLRK 1042>XP_005271813 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1202 TGAARLRK 1209>XP_006715738 Length = 1229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1217 TGAARLRK 1224>XP_005271810 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1264 TGAARLRK 1271>XP_005271809 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1274 TGAARLRK 1281>XP_005271808 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1306 TGAARLRK 1313>XP_005271807 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SGAARIRE 9 +GAAR+R+ Sbjct: 1321 TGAARLRK 1328>XP_005262788 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 214 AAGAARI 220>XP_006714142 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 174 AAGAARI 180>XP_005263617 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>XP_005263616 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>XP_005263612 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>XP_005263611 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>XP_005263610 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>XP_005263609 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>XP_005263608 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>XP_005263607 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ASGAARIR 8 A+GAAR R Sbjct: 6 AAGAARAR 13>NP_001095940 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 214 AAGAARI 220>NP_000663 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ASGAARI 7 A+GAARI Sbjct: 214 AAGAARI 220Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.122 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,980 Number of extensions: 469 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |