Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245312 17 3301 NP_001229698 16 5631 NP_001229697 16 5631 NP_001229696 16 5631 NP_056255 16 5631 NP_001098983 16 5631 XP_005266968 16 5631 XP_005266967 16 5631 XP_005266964 16 5631 XP_006713075 16 5631 XP_005264984 16 5631 XP_005264983 16 5631 XP_005264982 16 5631 XP_005264981 16 5631 XP_005264980 16 5631 XP_006713074 16 5631 XP_005264979 16 5631 XP_005264978 16 5631 NP_001248339 16 7355 NP_003558 16 7355 NP_001248337 16 7355 NP_001248338 16 7355 NP_008995 16 7355 NP_001019831 16 7355 NP_665698 16 7355 NP_001010940 16 7355 NP_060009 16 7355 NP_003387 16 7355 XP_006725694 16 7355 XP_005257694 16 7355 XP_006721125 16 7355 XP_006713877 16 7355 XP_006713876 16 7355 XP_006713875 16 7355 XP_006713874 16 7355 XP_006713873 16 7355 NP_065173 16 7355 NP_001018048 15 9605 NP_056001 15 9605 NP_001018047 15 9605 NP_150648 15 9605 NP_003895 15 9605 NP_001171869 15 9605 NP_671735 15 9605 NP_001171872 15 9605 NP_001165402 15 9605 NP_001165401 15 9605 NP_001171874 15 9605 NP_071407 15 9605 NP_001171870 15 9605 NP_001171871 15 9605 XP_006718005 15 9605 XP_006718004 15 9605 XP_006718003 15 9605 XP_006716803 15 9605 XP_005251459 15 9605 XP_005275746 15 9605 XP_003403671 15 9605 XP_006710003 15 9605>NP_001245312 Length = 416 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G LTTS Sbjct: 13 ARSGPLTTS 21>NP_001229698 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKGS+T S Sbjct: 242 RKGSMTMS 249>NP_001229697 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKGS+T S Sbjct: 177 RKGSMTMS 184>NP_001229696 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKGS+T S Sbjct: 243 RKGSMTMS 250>NP_056255 Length = 978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKGS+T S Sbjct: 242 RKGSMTMS 249>NP_001098983 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 219 AREGNMTTA 227>XP_005266968 Length = 607 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKGS+T S Sbjct: 243 RKGSMTMS 250>XP_005266967 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKGS+T S Sbjct: 243 RKGSMTMS 250>XP_005266964 Length = 986 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKGS+T S Sbjct: 242 RKGSMTMS 249>XP_006713075 Length = 1019 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 260 AREGNMTTA 268>XP_005264984 Length = 1140 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 73 AREGNMTTA 81>XP_005264983 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 260 AREGNMTTA 268>XP_005264982 Length = 1286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 219 AREGNMTTA 227>XP_005264981 Length = 1290 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 260 AREGNMTTA 268>XP_005264980 Length = 1313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 260 AREGNMTTA 268>XP_006713074 Length = 1318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 260 AREGNMTTA 268>XP_005264979 Length = 1322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 260 AREGNMTTA 268>XP_005264978 Length = 1327 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G++TT+ Sbjct: 260 AREGNMTTA 268>NP_001248339 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARKGSLT 7 AR+GSLT Sbjct: 182 AREGSLT 188>NP_003558 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARKGSLT 7 AR+GSLT Sbjct: 273 AREGSLT 279>NP_001248337 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARKGSLT 7 AR+GSLT Sbjct: 273 AREGSLT 279>NP_001248338 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARKGSLT 7 AR+GSLT Sbjct: 273 AREGSLT 279>NP_008995 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 464 RKGSLT 469>NP_001019831 Length = 2986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 2161 RKGSLT 2166>NP_665698 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ARKGSLTT 8 AR+G++TT Sbjct: 260 AREGNMTT 267>NP_001010940 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 29 RKGSLT 34>NP_060009 Length = 4116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G+L+T+ Sbjct: 4074 ARRGTLSTT 4082>NP_003387 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARKGSLT 7 AR+GSLT Sbjct: 265 ARQGSLT 271>XP_006725694 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARKGSLT 7 AR+GSLT Sbjct: 265 ARQGSLT 271>XP_005257694 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARKGSLT 7 AR+GSLT Sbjct: 265 ARQGSLT 271>XP_006721125 Length = 4070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ARKGSLTTS 9 AR+G+L+T+ Sbjct: 4028 ARRGTLSTT 4036>XP_006713877 Length = 2956 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 2131 RKGSLT 2136>XP_006713876 Length = 2966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 2141 RKGSLT 2146>XP_006713875 Length = 2975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 2150 RKGSLT 2155>XP_006713874 Length = 2979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 2154 RKGSLT 2159>XP_006713873 Length = 2988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKGSLT 7 RKGSLT Sbjct: 2163 RKGSLT 2168>NP_065173 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKGSLTTS 9 RKG +TTS Sbjct: 751 RKGIVTTS 758>NP_001018048 Length = 3069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKGSLTT 8 RKG +TT Sbjct: 1615 RKGKITT 1621>NP_056001 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKGSLTT 8 RKG +TT Sbjct: 1615 RKGKITT 1621>NP_001018047 Length = 3135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKGSLTT 8 RKG +TT Sbjct: 1576 RKGKITT 1582>NP_150648 Length = 3174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RKGSLTT 8 RKG +TT Sbjct: 1615 RKGKITT 1621>NP_003895 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ARKGSLTT 8 ++KG+LTT Sbjct: 138 SQKGALTT 145>NP_001171869 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 60 ARKGSL 65>NP_671735 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 43 ARKGSL 48>NP_001171872 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 43 ARKGSL 48>NP_001165402 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 723 ARSGEITTT 731>NP_001165401 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 723 ARSGEITTT 731>NP_001171874 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 32 ARKGSL 37>NP_071407 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 723 ARSGEITTT 731>NP_001171870 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 60 ARKGSL 65>NP_001171871 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 49 ARKGSL 54>XP_006718005 Length = 3397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 766 ARSGEITTT 774>XP_006718004 Length = 3399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 768 ARSGEITTT 776>XP_006718003 Length = 3419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 788 ARSGEITTT 796>XP_006716803 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 19 ARKGSL 24>XP_005251459 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ARKGSL 6 ARKGSL Sbjct: 19 ARKGSL 24>XP_005275746 Length = 3352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 721 ARSGEITTT 729>XP_003403671 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 723 ARSGEITTT 731>XP_006710003 Length = 3374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARKGSLTTS 9 AR G +TT+ Sbjct: 743 ARSGEITTT 751Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.108 0.260 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 486,158 Number of extensions: 794 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |