Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1135 NP_005913 18 1135 XP_005267046 18 1135 XP_005267045 18 1135 NP_000171 16 7355 NP_835471 16 7355 NP_892028 16 7355 XP_006723245 16 7355 XP_006723244 16 7355 XP_005258895 16 7355 XP_006713692 16 7355 XP_006713691 16 7355 XP_006713690 16 7355 XP_006713689 16 7355 XP_006713688 16 7355 XP_006713687 16 7355 NP_002142 16 7355 NP_689737 15 9605 NP_001153518 15 9605 NP_001153505 15 9605 NP_004810 15 9605 XP_005259343 15 9605 XP_005246402 15 9605 XP_006712393 15 9605 XP_005246401 15 9605>NP_006715 Length = 1558 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 ARIALV ND Sbjct: 557 ARIALVKND 565>NP_005913 Length = 1608 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 ARIALV ND Sbjct: 557 ARIALVKND 565>XP_005267046 Length = 1554 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 ARIALV ND Sbjct: 557 ARIALVKND 565>XP_005267045 Length = 1604 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 ARIALV ND Sbjct: 557 ARIALVKND 565>NP_000171 Length = 1103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ARIALVT 7 AR+ALVT Sbjct: 182 ARVALVT 188>NP_835471 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+AL T+D Sbjct: 31 ARLALQTSD 39>NP_892028 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+ +++ND Sbjct: 312 ARVPIISND 320>XP_006723245 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+ +++ND Sbjct: 284 ARVPIISND 292>XP_006723244 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+ +++ND Sbjct: 394 ARVPIISND 402>XP_005258895 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+ +++ND Sbjct: 448 ARVPIISND 456>XP_006713692 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+AL T+D Sbjct: 68 ARLALQTSD 76>XP_006713691 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+AL T+D Sbjct: 68 ARLALQTSD 76>XP_006713690 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+AL T+D Sbjct: 162 ARLALQTSD 170>XP_006713689 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+AL T+D Sbjct: 162 ARLALQTSD 170>XP_006713688 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+AL T+D Sbjct: 162 ARLALQTSD 170>XP_006713687 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+AL T+D Sbjct: 162 ARLALQTSD 170>NP_002142 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ARIALVTND 9 AR+ +++ND Sbjct: 312 ARVPIISND 320>NP_689737 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARIALVTND 9 AR+ L +ND Sbjct: 157 ARVPLTSND 165>NP_001153518 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARIALVTND 9 AR+ L +ND Sbjct: 157 ARVPLTSND 165>NP_001153505 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARIALVTND 9 AR+ L +ND Sbjct: 157 ARVPLTSND 165>NP_004810 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ALVTND 9 AL+TND Sbjct: 44 ALITND 49>XP_005259343 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ALVTND 9 AL+TND Sbjct: 44 ALITND 49>XP_005246402 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARIALVTND 9 AR+ L +ND Sbjct: 157 ARVPLTSND 165>XP_006712393 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARIALVTND 9 AR+ L +ND Sbjct: 163 ARVPLTSND 171>XP_005246401 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ARIALVTND 9 AR+ L +ND Sbjct: 163 ARVPLTSND 171Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.132 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 327,865 Number of extensions: 523 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |