Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 390 NP_858045 20 390 NP_006525 20 390 NP_001167559 20 390 NP_006531 18 1482 NP_671766 18 1482 NP_671756 18 1482 NP_003734 18 1482 XP_005251190 18 1482 XP_005251188 18 1482 XP_005251189 18 1482 XP_005251187 18 1482 XP_005251186 18 1482 XP_005251185 18 1482 XP_006712189 18 1482 XP_005264685 18 1482 XP_005264684 18 1482 XP_005264683 18 1482 XP_005264682 18 1482 NP_787028 17 4312 NP_001123910 16 7355 NP_003118 16 7355 NP_001182461 16 7355 NP_036220 16 7355 XP_005259906 16 7355 XP_006717317 16 7355 XP_006717316 16 7355 XP_006717315 16 7355 XP_006717314 16 7355 XP_006717313 16 7355 XP_006717312 16 7355 XP_006717311 16 7355 XP_006717310 16 7355 XP_006717309 16 7355 XP_006717308 16 7355 NP_115495 15 9605 NP_114108 15 9605 NP_778253 15 9605 NP_000709 15 9605 NP_001230741 15 9605 XP_005268910 15 9605>NP_001167558 Length = 1423 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMIAQRSR 9 AQM+AQRSR Sbjct: 1222 AQMVAQRSR 1230>NP_858045 Length = 1424 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMIAQRSR 9 AQM+AQRSR Sbjct: 1223 AQMVAQRSR 1231>NP_006525 Length = 1420 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMIAQRSR 9 AQM+AQRSR Sbjct: 1219 AQMVAQRSR 1227>NP_001167559 Length = 1415 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AQMIAQRSR 9 AQM+AQRSR Sbjct: 1214 AQMVAQRSR 1222>NP_006531 Length = 1464 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1232 AQMLAQRQR 1240>NP_671766 Length = 1440 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1106 AQMLAQRQR 1114>NP_671756 Length = 1399 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1106 AQMLAQRQR 1114>NP_003734 Length = 1441 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1106 AQMLAQRQR 1114>XP_005251190 Length = 1395 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1163 AQMLAQRQR 1171>XP_005251188 Length = 1464 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1232 AQMLAQRQR 1240>XP_005251189 Length = 1464 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1232 AQMLAQRQR 1240>XP_005251187 Length = 1464 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1232 AQMLAQRQR 1240>XP_005251186 Length = 1464 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1232 AQMLAQRQR 1240>XP_005251185 Length = 1464 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1232 AQMLAQRQR 1240>XP_006712189 Length = 1394 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1059 AQMLAQRQR 1067>XP_005264685 Length = 1399 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1106 AQMLAQRQR 1114>XP_005264684 Length = 1399 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1106 AQMLAQRQR 1114>XP_005264683 Length = 1440 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1106 AQMLAQRQR 1114>XP_005264682 Length = 1441 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQM+AQR R Sbjct: 1106 AQMLAQRQR 1114>NP_787028 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QMIAQRSR 9 ++IAQRSR Sbjct: 323 ELIAQRSR 330>NP_001123910 Length = 2477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1538 AQMIEKRSK 1546>NP_003118 Length = 2472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1538 AQMIEKRSK 1546>NP_001182461 Length = 2452 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1518 AQMIEKRSK 1526>NP_036220 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQMIAQRS 8 AQ++AQR+ Sbjct: 23 AQLVAQRA 30>XP_005259906 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQMIAQRS 8 AQ++AQR+ Sbjct: 62 AQLVAQRA 69>XP_006717317 Length = 2498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1538 AQMIEKRSK 1546>XP_006717316 Length = 2464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1530 AQMIEKRSK 1538>XP_006717315 Length = 2469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1530 AQMIEKRSK 1538>XP_006717314 Length = 2478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1518 AQMIEKRSK 1526>XP_006717313 Length = 2483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1550 AQMIEKRSK 1558>XP_006717312 Length = 2484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1550 AQMIEKRSK 1558>XP_006717311 Length = 2489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1550 AQMIEKRSK 1558>XP_006717310 Length = 2490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1530 AQMIEKRSK 1538>XP_006717309 Length = 2505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1550 AQMIEKRSK 1558>XP_006717308 Length = 2510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQMIAQRSR 9 AQMI +RS+ Sbjct: 1550 AQMIEKRSK 1558>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MIAQRSR 9 ++AQRSR Sbjct: 2980 LVAQRSR 2986>NP_114108 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QMIAQRSR 9 Q IAQRS+ Sbjct: 155 QTIAQRSK 162>NP_778253 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QMIAQRSR 9 ++IAQRS+ Sbjct: 343 ELIAQRSK 350>NP_000709 Length = 2339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QMIAQRSR 9 Q IAQR+R Sbjct: 47 QSIAQRAR 54>NP_001230741 Length = 2237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QMIAQRSR 9 Q IAQR+R Sbjct: 47 QSIAQRAR 54>XP_005268910 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QMIAQRSR 9 ++IAQRS+ Sbjct: 110 ELIAQRSK 117Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.120 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 258,581 Number of extensions: 249 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |