Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_057502                                                              19     665
NP_861969                                                              19     665
NP_000259                                                              19     665
NP_861968                                                              19     665
NP_861966                                                              19     665
NP_861970                                                              19     665
NP_861546                                                              19     665
NP_861967                                                              19     665
NP_872580                                                              17    4312
NP_067021                                                              17    4312
NP_001092880                                                           16    5631
NP_001092881                                                           16    5631
NP_055525                                                              16    5631
NP_001171656                                                           16    5631
NP_059986                                                              16    5631
XP_005252905                                                           16    5631
XP_005252904                                                           16    5631
NP_036326                                                              16    5631
NP_071731                                                              16    7355
NP_066554                                                              16    7355
NP_003310                                                              16    7355
NP_597676                                                              16    7355
NP_001243779                                                           16    7355
NP_596869                                                              16    7355
NP_612391                                                              16    7355
NP_060362                                                              16    7355
NP_001161693                                                           16    7355
XP_006724320                                                           16    7355
XP_005246888                                                           16    7355
XP_006712788                                                           16    7355
XP_006712787                                                           16    7355
XP_006712786                                                           16    7355
XP_005246736                                                           16    7355
XP_005246735                                                           16    7355
XP_005246734                                                           16    7355
XP_005246733                                                           16    7355
XP_005246404                                                           16    7355
XP_006712267                                                           16    7355
NP_078850                                                              16    7355
NP_001254479                                                           16    7355
NP_597681                                                              16    7355
NP_996879                                                              15    9605
NP_066964                                                              15    9605
NP_001243749                                                           15    9605
NP_001243750                                                           15    9605
NP_008843                                                              15    9605
NP_001158220                                                           15    9605
NP_001158219                                                           15    9605
NP_009142                                                              15    9605
NP_001158218                                                           15    9605
NP_001138548                                                           15    9605
NP_061936                                                              15    9605
NP_001172003                                                           15    9605
NP_001171988                                                           15    9605
NP_078893                                                              15    9605
NP_060024                                                              15    9605
XP_006719091                                                           15    9605
XP_006719090                                                           15    9605
XP_006717349                                                           15    9605
XP_005252266                                                           15    9605
XP_005252265                                                           15    9605
XP_005252264                                                           15    9605
XP_006717348                                                           15    9605
XP_006717347                                                           15    9605
XP_006717346                                                           15    9605
XP_005247602                                                           15    9605
XP_005246893                                                           15    9605
XP_006712055                                                           15    9605
XP_006712054                                                           15    9605
XP_005264324                                                           15    9605
XP_006710493                                                           15    9605
XP_006710491                                                           15    9605
XP_006710490                                                           15    9605
XP_006710489                                                           15    9605
>NP_057502
          Length = 590

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 388 AQITEEEAK 396
>NP_861969
          Length = 507

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 305 AQITEEEAK 313
>NP_000259
          Length = 595

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 388 AQITEEEAK 396
>NP_861968
          Length = 507

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 305 AQITEEEAK 313
>NP_861966
          Length = 548

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 346 AQITEEEAK 354
>NP_861970
          Length = 590

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 388 AQITEEEAK 396
>NP_861546
          Length = 590

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 388 AQITEEEAK 396
>NP_861967
          Length = 549

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   AQITKEEAK 9
           AQIT+EEAK
Sbjct: 347 AQITEEEAK 355
>NP_872580
          Length = 260

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2  QITKEEAK 9
          QI+KEEA+
Sbjct: 9  QISKEEAR 16
>NP_067021
          Length = 261

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2  QITKEEAK 9
          QI+KEEA+
Sbjct: 9  QISKEEAR 16
>NP_001092880
          Length = 1395

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   ITKEEAK 9
           +TKEEAK
Sbjct: 380 MTKEEAK 386
>NP_001092881
          Length = 1395

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   ITKEEAK 9
           +TKEEAK
Sbjct: 380 MTKEEAK 386
>NP_055525
          Length = 1395

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   ITKEEAK 9
           +TKEEAK
Sbjct: 380 MTKEEAK 386
>NP_001171656
          Length = 1395

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   ITKEEAK 9
           +TKEEAK
Sbjct: 380 MTKEEAK 386
>NP_059986
          Length = 217

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QITKEEAK 9
           Q+T+EEA+
Sbjct: 136 QVTREEAE 143
>XP_005252905
          Length = 1854

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    QITKEEAK 9
            ++TKEEA+
Sbjct: 1324 KVTKEEAR 1331
>XP_005252904
          Length = 1855

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    QITKEEAK 9
            ++TKEEA+
Sbjct: 1325 KVTKEEAR 1332
>NP_036326
          Length = 1849

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    QITKEEAK 9
            ++TKEEA+
Sbjct: 1319 KVTKEEAR 1326
>NP_071731
          Length = 448

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   AQITKEEAK 9
           AQ++K+E K
Sbjct: 231 AQVSKDEEK 239
>NP_066554
          Length = 1020

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 642 TKEEAK 647
>NP_003310
          Length = 26926

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    QITKEE 7
            QITKEE
Sbjct: 8950 QITKEE 8955
>NP_597676
          Length = 27051

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    QITKEE 7
            QITKEE
Sbjct: 9075 QITKEE 9080
>NP_001243779
          Length = 34350

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2     QITKEE 7
             QITKEE
Sbjct: 16374 QITKEE 16379
>NP_596869
          Length = 33423

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2     QITKEE 7
             QITKEE
Sbjct: 15447 QITKEE 15452
>NP_612391
          Length = 151

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  AQITKEEAK 9
          A++TK E+K
Sbjct: 85 AEVTKAESK 93
>NP_060362
          Length = 930

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 365 TKEEAK 370
>NP_001161693
          Length = 1820

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    TKEEAK 9
            TKEEAK
Sbjct: 1438 TKEEAK 1443
>XP_006724320
          Length = 1006

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 628 TKEEAK 633
>XP_005246888
          Length = 22663

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    QITKEE 7
            QITKEE
Sbjct: 4687 QITKEE 4692
>XP_006712788
          Length = 24022

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    QITKEE 7
            QITKEE
Sbjct: 6046 QITKEE 6051
>XP_006712787
          Length = 33978

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2     QITKEE 7
             QITKEE
Sbjct: 16002 QITKEE 16007
>XP_006712786
          Length = 35484

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2     QITKEE 7
             QITKEE
Sbjct: 17508 QITKEE 17513
>XP_005246736
          Length = 976

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 407 TKEEAK 412
>XP_005246735
          Length = 976

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 407 TKEEAK 412
>XP_005246734
          Length = 934

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 365 TKEEAK 370
>XP_005246733
          Length = 972

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 407 TKEEAK 412
>XP_005246404
          Length = 1821

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    TKEEAK 9
            TKEEAK
Sbjct: 1439 TKEEAK 1444
>XP_006712267
          Length = 480

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   AQITKEEAK 9
           AQ++K+E K
Sbjct: 263 AQVSKDEEK 271
>NP_078850
          Length = 568

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TKEEAK 9
           TKEEAK
Sbjct: 334 TKEEAK 339
>NP_001254479
          Length = 35991

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2     QITKEE 7
             QITKEE
Sbjct: 18015 QITKEE 18020
>NP_597681
          Length = 27118

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    QITKEE 7
            QITKEE
Sbjct: 9142 QITKEE 9147
>NP_996879
          Length = 2223

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 861 ITKEEA 866
>NP_066964
          Length = 732

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 686 ITKEEA 691
>NP_001243749
          Length = 183

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   QITKEE 7
           Q+TKEE
Sbjct: 107 QVTKEE 112
>NP_001243750
          Length = 236

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   QITKEE 7
           Q+TKEE
Sbjct: 160 QVTKEE 165
>NP_008843
          Length = 219

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   QITKEE 7
           Q+TKEE
Sbjct: 143 QVTKEE 148
>NP_001158220
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   AQITKEEAK 9
           AQ+ +EE K
Sbjct: 284 AQVNEEEVK 292
>NP_001158219
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   AQITKEEAK 9
           AQ+ +EE K
Sbjct: 284 AQVNEEEVK 292
>NP_009142
          Length = 392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   AQITKEEAK 9
           AQ+ +EE K
Sbjct: 284 AQVNEEEVK 292
>NP_001158218
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   AQITKEEAK 9
           AQ+ +EE K
Sbjct: 284 AQVNEEEVK 292
>NP_001138548
          Length = 923

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QITKEEAK 9
           +I+KE+AK
Sbjct: 902 EISKEQAK 909
>NP_061936
          Length = 981

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QITKEEAK 9
           +I+KE+AK
Sbjct: 960 EISKEQAK 967
>NP_001172003
          Length = 1259

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 398 ITKEEA 403
>NP_001171988
          Length = 1495

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>NP_078893
          Length = 1495

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>NP_060024
          Length = 1801

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    ITKEEA 8
            ITKEEA
Sbjct: 1236 ITKEEA 1241
>XP_006719091
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   AQITKEEAK 9
           AQ+ +EE K
Sbjct: 284 AQVNEEEVK 292
>XP_006719090
          Length = 419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   AQITKEEAK 9
           AQ+ +EE K
Sbjct: 284 AQVNEEEVK 292
>XP_006717349
          Length = 1046

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>XP_005252266
          Length = 1046

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>XP_005252265
          Length = 1381

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>XP_005252264
          Length = 1478

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>XP_006717348
          Length = 1541

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>XP_006717347
          Length = 1541

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>XP_006717346
          Length = 1541

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 521 ITKEEA 526
>XP_005247602
          Length = 1665

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    ITKEEA 8
            ITKEEA
Sbjct: 1100 ITKEEA 1105
>XP_005246893
          Length = 827

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 781 ITKEEA 786
>XP_006712055
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QITKEEAK 9
           +I+KE+AK
Sbjct: 892 EISKEQAK 899
>XP_006712054
          Length = 934

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QITKEEAK 9
           +I+KE+AK
Sbjct: 913 EISKEQAK 920
>XP_005264324
          Length = 992

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QITKEEAK 9
           +I+KE+AK
Sbjct: 971 EISKEQAK 978
>XP_006710493
          Length = 1305

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 861 ITKEEA 866
>XP_006710491
          Length = 1496

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 134 ITKEEA 139
>XP_006710490
          Length = 2158

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 796 ITKEEA 801
>XP_006710489
          Length = 2185

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   ITKEEA 8
           ITKEEA
Sbjct: 861 ITKEEA 866
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.288    0.104    0.229 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 555,701
Number of extensions: 903
Number of successful extensions: 74
Number of sequences better than 10000.0: 74
Number of HSP's gapped: 74
Number of HSP's successfully gapped: 74
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.9 bits)
S2: 28 (15.4 bits)

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