Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 509 NP_001171601 16 5631 NP_001954 16 5631 NP_071378 16 5631 NP_001171602 16 5631 NP_001073847 16 5631 NP_001073848 16 5631 NP_689623 16 5631 NP_775794 16 5631 NP_149076 16 5631 XP_005260563 16 5631 XP_005260561 16 5631 XP_006716681 16 5631 XP_005266883 16 5631 XP_006715408 16 5631 XP_005266882 16 5631 XP_006715407 16 5631 XP_005266881 16 5631 XP_006715406 16 5631 XP_005262858 16 5631 XP_005262857 16 5631 XP_005262856 16 5631 XP_006714188 16 5631 XP_006714187 16 5631 XP_005262855 16 5631 XP_005262854 16 5631 XP_005262853 16 5631 NP_001034201 16 5631 NP_705838 16 7355 XP_006726150 16 7355 XP_006726060 16 7355 XP_006725970 16 7355 XP_006725879 16 7355 XP_006725761 16 7355 XP_006725102 16 7355 XP_006715140 16 7355 NP_055020 16 7355 NP_056412 15 9605 NP_001139110 15 9605 NP_000597 15 9605 XP_005274107 15 9605 NP_057139 15 9605>NP_004251 Length = 1208 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQHLVVAEE 9 AQHL VAEE Sbjct: 653 AQHLAVAEE 661>NP_001171601 Length = 1166 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>NP_001954 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>NP_071378 Length = 1342 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QHLVVAEE 9 +H++VA+E Sbjct: 1184 EHIIVAQE 1191>NP_001171602 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 777 SQHMLVAE 784>NP_001073847 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>NP_001073848 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>NP_689623 Length = 296 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>NP_775794 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AQHLVVA 7 +QHLVVA Sbjct: 241 SQHLVVA 247>NP_149076 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QHLVVAE 8 +HLV+AE Sbjct: 30 EHLVIAE 36>XP_005260563 Length = 1166 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QHLVVAEE 9 +H++VA+E Sbjct: 1008 EHIIVAQE 1015>XP_005260561 Length = 1341 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QHLVVAEE 9 +H++VA+E Sbjct: 1183 EHIIVAQE 1190>XP_006716681 Length = 1867 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLVVAEE 9 HLV AEE Sbjct: 1781 HLVTAEE 1787>XP_005266883 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>XP_006715408 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>XP_005266882 Length = 214 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>XP_006715407 Length = 221 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>XP_005266881 Length = 221 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>XP_006715406 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 QHLVV+ E Sbjct: 173 QHLVVSAE 180>XP_005262858 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>XP_005262857 Length = 1052 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>XP_005262856 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>XP_006714188 Length = 1132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 736 SQHMLVAE 743>XP_006714187 Length = 1133 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>XP_005262855 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>XP_005262854 Length = 1173 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 777 SQHMLVAE 784>XP_005262853 Length = 1215 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AQHLVVAE 8 +QH++VAE Sbjct: 819 SQHMLVAE 826>NP_001034201 Length = 1857 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLVVAEE 9 HLV AEE Sbjct: 1771 HLVTAEE 1777>NP_705838 Length = 4069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQHLVVAEE 9 A+H V++EE Sbjct: 625 AEHAVLSEE 633>XP_006726150 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QHLVVAE 8 QHLV+ E Sbjct: 8 QHLVICE 14>XP_006726060 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QHLVVAE 8 QHLV+ E Sbjct: 8 QHLVICE 14>XP_006725970 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QHLVVAE 8 QHLV+ E Sbjct: 8 QHLVICE 14>XP_006725879 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QHLVVAE 8 QHLV+ E Sbjct: 8 QHLVICE 14>XP_006725761 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QHLVVAE 8 QHLV+ E Sbjct: 8 QHLVICE 14>XP_006725102 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QHLVVAE 8 QHLV+ E Sbjct: 8 QHLVICE 14>XP_006715140 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QHLVVAE 8 QHLV+ E Sbjct: 8 QHLVICE 14>NP_055020 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLVVAEE 9 H VVAEE Sbjct: 368 HAVVAEE 374>NP_056412 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QHLVVAEE 9 +HL++A+E Sbjct: 314 RHLLIAQE 321>NP_001139110 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QHLVVAEE 9 +HL++A+E Sbjct: 314 RHLLIAQE 321>NP_000597 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AQHLVVAE 8 A H+VVAE Sbjct: 122 AVHVVVAE 129>XP_005274107 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 +HL+ AEE Sbjct: 42 KHLIKAEE 49>NP_057139 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QHLVVAEE 9 +HL+ AEE Sbjct: 60 KHLIKAEE 67Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.121 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 547,189 Number of extensions: 775 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |