Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055726 20 509 NP_064543 17 2528 NP_000497 16 5631 NP_996816 16 7355 NP_071406 16 7355 NP_775182 16 7355 NP_001158221 16 7355 NP_001159365 16 7355 NP_060175 16 7355 NP_001098024 16 7355 NP_443160 16 7355 XP_005256493 16 7355 XP_006721500 16 7355 XP_005254553 16 7355 XP_006720647 16 7355 XP_005254552 16 7355 XP_005254551 16 7355 XP_006720646 16 7355 XP_005268050 16 7355 XP_005268049 16 7355 XP_005268048 16 7355 NP_005624 15 9605 NP_001181926 15 9605 NP_001014437 15 9605 NP_060233 15 9605 XP_006725192 15 9605 XP_006718403 15 9605 XP_005272083 15 9605 XP_005264572 15 9605 NP_060135 15 9605>NP_055726 Length = 961 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 AQAQAT QH Sbjct: 455 AQAQATPQH 463>NP_064543 Length = 235 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 A AQA SQH Sbjct: 211 AAAQAASQH 219>NP_000497 Length = 622 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 AQA+A S+H Sbjct: 240 AQAKALSKH 248>NP_996816 Length = 5202 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AQATSQH 9 AQATS H Sbjct: 3973 AQATSAH 3979>NP_071406 Length = 901 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A AQA+S+H Sbjct: 557 AGAQASSKH 565>NP_775182 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A AQA+S+H Sbjct: 576 AGAQASSKH 584>NP_001158221 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A AQA+S+H Sbjct: 589 AGAQASSKH 597>NP_001159365 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A AQA+S+H Sbjct: 559 AGAQASSKH 567>NP_060175 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 AQ +ATS H Sbjct: 212 AQNEATSYH 220>NP_001098024 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 AQ +ATS H Sbjct: 212 AQNEATSYH 220>NP_443160 Length = 804 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AQAQATSQH 9 AQA T QH Sbjct: 503 AQAMTTIQH 511>XP_005256493 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AQAQATSQH 9 AQA T QH Sbjct: 503 AQAMTTIQH 511>XP_006721500 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AQAQATSQH 9 AQA T QH Sbjct: 399 AQAMTTIQH 407>XP_005254553 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 AQ +ATS H Sbjct: 97 AQNEATSYH 105>XP_006720647 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 AQ +ATS H Sbjct: 101 AQNEATSYH 109>XP_005254552 Length = 316 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 AQ +ATS H Sbjct: 198 AQNEATSYH 206>XP_005254551 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 AQ +ATS H Sbjct: 212 AQNEATSYH 220>XP_006720646 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AQAQATSQH 9 AQ +ATS H Sbjct: 212 AQNEATSYH 220>XP_005268050 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A AQA+S+H Sbjct: 576 AGAQASSKH 584>XP_005268049 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A AQA+S+H Sbjct: 594 AGAQASSKH 602>XP_005268048 Length = 940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A AQA+S+H Sbjct: 596 AGAQASSKH 604>NP_005624 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QATSQH 9 Q+TSQH Sbjct: 1296 QSTSQH 1301>NP_001181926 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A+AQA ++H Sbjct: 23 ARAQALNEH 31>NP_001014437 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A+AQA ++H Sbjct: 23 ARAQALNEH 31>NP_060233 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QATSQH 9 Q+TSQH Sbjct: 422 QSTSQH 427>XP_006725192 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A+AQA ++H Sbjct: 23 ARAQALNEH 31>XP_006718403 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AQAQATSQH 9 A+AQA ++H Sbjct: 23 ARAQALNEH 31>XP_005272083 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QAQATSQH 9 QA+A QH Sbjct: 13 QAEANKQH 20>XP_005264572 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QATSQH 9 Q+TSQH Sbjct: 1281 QSTSQH 1286>NP_060135 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QAQATSQH 9 QA+A QH Sbjct: 13 QAEANKQH 20Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.0907 0.221 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 296,336 Number of extensions: 391 Number of successful extensions: 30 Number of sequences better than 10000.0: 30 Number of HSP's gapped: 30 Number of HSP's successfully gapped: 30 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |