Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_690607 17 3301 NP_004972 17 3301 NP_055558 17 4312 NP_001094060 17 4312 NP_659483 17 4312 XP_005248098 17 4312 XP_006713998 17 4312 XP_006713997 17 4312 NP_006845 16 5631 NP_001094073 16 5631 NP_653299 16 5631 NP_001267728 16 5631 NP_006792 16 5631 NP_001177203 16 7355 NP_079409 16 7355 NP_001007215 16 7355 NP_055227 16 7355 NP_116202 16 7355 NP_001073137 16 7355 NP_001273382 16 7355 NP_872393 16 7355 XP_006720018 16 7355 XP_005254139 16 7355 XP_006720017 16 7355 XP_006712515 16 7355 XP_006712514 16 7355 XP_006712513 16 7355 XP_006712512 16 7355 XP_006712511 16 7355 XP_006712510 16 7355 XP_006712509 16 7355 XP_005246533 16 7355 XP_006712508 16 7355 XP_005264631 16 7355 XP_005264630 16 7355 XP_005264629 16 7355 XP_005245149 16 7355 NP_115893 16 7355 NP_001277140 15 9605 NP_001010855 15 9605 NP_620584 15 9605 XP_005253898 15 9605>NP_690607 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 ANLS KSQ Sbjct: 33 ANLSNKSQ 40>NP_004972 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 ANLS KSQ Sbjct: 33 ANLSNKSQ 40>NP_055558 Length = 1395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANLSGKSQS 9 AN+ GK+QS Sbjct: 678 ANMLGKTQS 686>NP_001094060 Length = 1395 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANLSGKSQS 9 AN+ GK+QS Sbjct: 678 ANMLGKTQS 686>NP_659483 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLSGKSQ 8 NL+GKSQ Sbjct: 121 NLNGKSQ 127>XP_005248098 Length = 1310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANLSGKSQS 9 AN+ GK+QS Sbjct: 569 ANMLGKTQS 577>XP_006713998 Length = 1332 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANLSGKSQS 9 AN+ GK+QS Sbjct: 678 ANMLGKTQS 686>XP_006713997 Length = 1419 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANLSGKSQS 9 AN+ GK+QS Sbjct: 678 ANMLGKTQS 686>NP_006845 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 30 AGISGKSQ 37>NP_001094073 Length = 186 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 30 AGISGKSQ 37>NP_653299 Length = 1001 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 798 ATMSGKSQ 805>NP_001267728 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 708 ATMSGKSQ 715>NP_006792 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 30 AGISGKSQ 37>NP_001177203 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 137 ARVSGKSQ 144>NP_079409 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 53 ARVSGKSQ 60>NP_001007215 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLSGKSQS 9 NL+GKS S Sbjct: 76 NLNGKSYS 83>NP_055227 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLSGKSQS 9 NL+GKS S Sbjct: 119 NLNGKSYS 126>NP_116202 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+ GKSQ Sbjct: 678 ANVLGKSQ 685>NP_001073137 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+ GKSQ Sbjct: 659 ANVLGKSQ 666>NP_001273382 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+ GKSQ Sbjct: 548 ANVLGKSQ 555>NP_872393 Length = 3234 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1542 ANLEGKKDS 1550>XP_006720018 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+ GKSQ Sbjct: 432 ANVLGKSQ 439>XP_005254139 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+ GKSQ Sbjct: 442 ANVLGKSQ 449>XP_006720017 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+ GKSQ Sbjct: 659 ANVLGKSQ 666>XP_006712515 Length = 3232 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1540 ANLEGKKDS 1548>XP_006712514 Length = 2496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1613 ANLEGKKDS 1621>XP_006712513 Length = 3220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1509 ANLEGKKDS 1517>XP_006712512 Length = 3237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1545 ANLEGKKDS 1553>XP_006712511 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1545 ANLEGKKDS 1553>XP_006712510 Length = 3305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1613 ANLEGKKDS 1621>XP_006712509 Length = 3319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1608 ANLEGKKDS 1616>XP_005246533 Length = 3323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1613 ANLEGKKDS 1621>XP_006712508 Length = 3324 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1613 ANLEGKKDS 1621>XP_005264631 Length = 926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 137 ARVSGKSQ 144>XP_005264630 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 137 ARVSGKSQ 144>XP_005264629 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 A +SGKSQ Sbjct: 137 ARVSGKSQ 144>XP_005245149 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLSGKSQS 9 NL+GKS S Sbjct: 76 NLNGKSYS 83>NP_115893 Length = 3258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ANLSGKSQS 9 ANL GK S Sbjct: 1547 ANLEGKKDS 1555>NP_001277140 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANLSGKSQS 9 +NL+GKS S Sbjct: 521 SNLAGKSFS 529>NP_001010855 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ANLSGKSQS 9 +NL+GKS S Sbjct: 657 SNLAGKSFS 665>NP_620584 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+SG+ Q Sbjct: 303 ANISGRMQ 310>XP_005253898 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ANLSGKSQ 8 AN+SG+ Q Sbjct: 266 ANISGRMQ 273Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.282 0.0994 0.227 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 538,884 Number of extensions: 542 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |