Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_054790 16 5631 XP_006723818 16 5631 XP_006723817 16 5631 XP_006723816 16 5631 XP_006723815 16 5631 XP_006723814 16 5631 XP_006723813 16 5631 XP_005260405 16 5631 NP_001094058 16 7355 NP_061323 16 7355 XP_006716433 16 7355 XP_005273633 16 7355 XP_006716432 16 7355 XP_005273632 16 7355 NP_079033 15 9605 NP_001275915 15 9605 NP_001275914 15 9605 NP_001537 15 9605 NP_009099 15 9605 NP_005654 15 9605 NP_056052 15 9605 NP_079467 15 9605 NP_001138648 15 9605 XP_005256997 15 9605 XP_005256995 15 9605 XP_006717353 15 9605 XP_006717352 15 9605 XP_005266166 15 9605 XP_005266167 15 9605 XP_005266165 15 9605 XP_005266164 15 9605 XP_006717351 15 9605 XP_005266163 15 9605 XP_005266162 15 9605 XP_006713980 15 9605 XP_006713979 15 9605 XP_005245556 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ANALNSEPA 9 ANAL+SEPA Sbjct: 3338 ANALSSEPA 3346>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ANALNSEPA 9 ANAL+SEPA Sbjct: 3338 ANALSSEPA 3346>NP_054790 Length = 2063 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1716 NALSSSPA 1723>XP_006723818 Length = 1975 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1716 NALSSSPA 1723>XP_006723817 Length = 2020 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1673 NALSSSPA 1680>XP_006723816 Length = 2034 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1716 NALSSSPA 1723>XP_006723815 Length = 2051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1704 NALSSSPA 1711>XP_006723814 Length = 2052 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1705 NALSSSPA 1712>XP_006723813 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1716 NALSSSPA 1723>XP_005260405 Length = 2063 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NALNSEPA 9 NAL+S PA Sbjct: 1716 NALSSSPA 1723>NP_001094058 Length = 1191 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 849 NAIDSEP 855>NP_061323 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 849 NAIDSEP 855>XP_006716433 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NALNSE 7 NALNSE Sbjct: 223 NALNSE 228>XP_005273633 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NALNSE 7 NALNSE Sbjct: 223 NALNSE 228>XP_006716432 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NALNSE 7 NALNSE Sbjct: 326 NALNSE 331>XP_005273632 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NALNSE 7 NALNSE Sbjct: 326 NALNSE 331>NP_079033 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 1027 NAVDSEP 1033>NP_001275915 Length = 1616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ANALNS 6 ANALNS Sbjct: 1261 ANALNS 1266>NP_001275914 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ANALNS 6 ANALNS Sbjct: 1266 ANALNS 1271>NP_001537 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALNSEPA 9 ALN++PA Sbjct: 142 ALNTDPA 148>NP_009099 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ANALNS 6 ANALNS Sbjct: 1226 ANALNS 1231>NP_005654 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALNSEPA 9 +LN+EPA Sbjct: 323 SLNNEPA 329>NP_056052 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NALNSEP 8 N+LNS P Sbjct: 662 NSLNSNP 668>NP_079467 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NALNSEP 8 N+LNS P Sbjct: 838 NSLNSHP 844>NP_001138648 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ANALNSEPA 9 +NA ++EPA Sbjct: 22 SNATSAEPA 30>XP_005256997 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ANALNS 6 ANALNS Sbjct: 1205 ANALNS 1210>XP_005256995 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ANALNS 6 ANALNS Sbjct: 1266 ANALNS 1271>XP_006717353 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 972 NAVDSEP 978>XP_006717352 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 979 NAVDSEP 985>XP_005266166 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 996 NAVDSEP 1002>XP_005266167 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 996 NAVDSEP 1002>XP_005266165 Length = 1272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 1001 NAVDSEP 1007>XP_005266164 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 1020 NAVDSEP 1026>XP_006717351 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 1021 NAVDSEP 1027>XP_005266163 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 1023 NAVDSEP 1029>XP_005266162 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NALNSEP 8 NA++SEP Sbjct: 1024 NAVDSEP 1030>XP_006713980 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALNSEPA 9 +LN+EPA Sbjct: 242 SLNNEPA 248>XP_006713979 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALNSEPA 9 +LN+EPA Sbjct: 348 SLNNEPA 354>XP_005245556 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NALNSEP 8 N+LNS P Sbjct: 839 NSLNSHP 845Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.105 0.267 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 678,629 Number of extensions: 793 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |