Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004809 18 1135 XP_006719762 18 1135 NP_776175 17 2528 XP_005254367 17 2528 XP_006720536 17 2528 NP_001017969 16 5631 NP_116279 16 5631 NP_002421 16 5631 XP_006716793 16 5631 XP_005251442 16 5631 XP_006711658 16 5631 XP_005273393 16 5631 XP_006711657 16 5631 XP_006711656 16 5631 XP_005273392 16 5631 XP_006711655 16 5631 NP_055646 16 7355 NP_001139745 16 7355 XP_006723242 16 7355 XP_005258889 16 7355 XP_006713495 16 7355 NP_976219 16 7355 NP_001008495 16 7355 NP_037500 16 7355 NP_001108086 15 9605 NP_005919 15 9605 NP_000444 15 9605 NP_037528 15 9605 NP_001269970 15 9605 NP_001269971 15 9605 NP_065937 15 9605 NP_001121 15 9605 NP_945321 15 9605 NP_945320 15 9605 XP_006722727 15 9605 XP_005254978 15 9605 XP_005254977 15 9605 XP_005271698 15 9605 XP_005271696 15 9605 XP_005271695 15 9605 XP_005271694 15 9605 XP_005271693 15 9605 XP_005271690 15 9605 XP_005271689 15 9605 XP_005271688 15 9605 XP_005271687 15 9605>NP_004809 Length = 820 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AMPVGLQN 8 A+P+GLQN Sbjct: 421 AIPIGLQN 428>XP_006719762 Length = 602 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AMPVGLQN 8 A+P+GLQN Sbjct: 421 AIPIGLQN 428>NP_776175 Length = 1150 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVGLQNS 9 PVGLQN+ Sbjct: 761 PVGLQNA 767>XP_005254367 Length = 1031 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVGLQNS 9 PVGLQN+ Sbjct: 642 PVGLQNA 648>XP_006720536 Length = 1072 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PVGLQNS 9 PVGLQN+ Sbjct: 683 PVGLQNA 689>NP_001017969 Length = 2103 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MPVGLQNS 9 +P+ LQNS Sbjct: 1074 LPIDLQNS 1081>NP_116279 Length = 1524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PVGLQNS 9 P G+QNS Sbjct: 1344 PAGMQNS 1350>NP_002421 Length = 1320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MPVGLQNS 9 MPVGL+ S Sbjct: 323 MPVGLEPS 330>XP_006716793 Length = 1317 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MPVGLQNS 9 +P+ LQNS Sbjct: 288 LPIDLQNS 295>XP_005251442 Length = 2073 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MPVGLQNS 9 +P+ LQNS Sbjct: 1044 LPIDLQNS 1051>XP_006711658 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PVGLQNS 9 P G+QNS Sbjct: 1055 PAGMQNS 1061>XP_005273393 Length = 1330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PVGLQNS 9 P G+QNS Sbjct: 1150 PAGMQNS 1156>XP_006711657 Length = 1330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PVGLQNS 9 P G+QNS Sbjct: 1150 PAGMQNS 1156>XP_006711656 Length = 1524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PVGLQNS 9 P G+QNS Sbjct: 1344 PAGMQNS 1350>XP_005273392 Length = 1524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PVGLQNS 9 P G+QNS Sbjct: 1344 PAGMQNS 1350>XP_006711655 Length = 1524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PVGLQNS 9 P G+QNS Sbjct: 1344 PAGMQNS 1350>NP_055646 Length = 2925 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMPVGLQNS 9 A+P GLQ S Sbjct: 455 ALPDGLQES 463>NP_001139745 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MPVGLQNS 9 +P GLQN+ Sbjct: 255 IPFGLQNA 262>XP_006723242 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 P+GLQN Sbjct: 118 PLGLQN 123>XP_005258889 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 P+GLQN Sbjct: 118 PLGLQN 123>XP_006713495 Length = 2969 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMPVGLQNS 9 A+P GLQ S Sbjct: 499 ALPDGLQES 507>NP_976219 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 P+GLQN Sbjct: 118 PLGLQN 123>NP_001008495 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MPVGLQNS 9 +P GLQN+ Sbjct: 255 IPFGLQNA 262>NP_037500 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 P+GLQN Sbjct: 118 PLGLQN 123>NP_001108086 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMPVGLQNS 9 A P+GL+N+ Sbjct: 231 ANPLGLKNN 239>NP_005919 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMPVGLQNS 9 A P+GL+N+ Sbjct: 231 ANPLGLKNN 239>NP_000444 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMPVGLQNS 9 A+PVGL S Sbjct: 56 ALPVGLSLS 64>NP_037528 Length = 1055 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 168 PVGLKN 173>NP_001269970 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 168 PVGLKN 173>NP_001269971 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 168 PVGLKN 173>NP_065937 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 161 PVGLKN 166>NP_001121 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MPVGLQ 7 +PVGLQ Sbjct: 145 LPVGLQ 150>NP_945321 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MPVGLQ 7 +PVGLQ Sbjct: 144 LPVGLQ 149>NP_945320 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MPVGLQ 7 +PVGLQ Sbjct: 212 LPVGLQ 217>XP_006722727 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MPVGLQ 7 +PVGLQ Sbjct: 211 LPVGLQ 216>XP_005254978 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMPVGLQNS 9 A P+GL+N+ Sbjct: 119 ANPLGLKNN 127>XP_005254977 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMPVGLQNS 9 A P+GL+N+ Sbjct: 231 ANPLGLKNN 239>XP_005271698 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 36 PVGLKN 41>XP_005271696 Length = 1045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 161 PVGLKN 166>XP_005271695 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 161 PVGLKN 166>XP_005271694 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 161 PVGLKN 166>XP_005271693 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 161 PVGLKN 166>XP_005271690 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 139 PVGLKN 144>XP_005271689 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 158 PVGLKN 163>XP_005271688 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 161 PVGLKN 166>XP_005271687 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PVGLQN 8 PVGL+N Sbjct: 161 PVGLKN 166Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.125 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 679,259 Number of extensions: 1068 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |