Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1135 NP_001263689 18 1135 NP_001119584 18 1135 NP_001119586 18 1135 NP_001263625 18 1135 NP_001119590 18 1135 NP_001263690 18 1135 NP_001119585 18 1135 NP_001263624 18 1135 NP_001119588 18 1135 NP_001119587 18 1135 NP_001119589 18 1135 NP_065783 17 4312 NP_059989 17 4312 XP_006715590 17 4312 XP_005267126 17 4312 XP_006715589 17 4312 XP_006715588 17 4312 XP_006715587 17 4312 XP_006715586 17 4312 NP_001269609 16 5631 NP_001269610 16 5631 NP_001258733 16 5631 NP_002616 16 5631 NP_001258734 16 5631 XP_005262071 16 5631 XP_005251961 16 5631 XP_006717107 16 5631 XP_006717106 16 5631 XP_006717105 16 5631 XP_005251958 16 5631 NP_004534 15 9605 NP_006166 15 9605 NP_001258137 15 9605 NP_001248392 15 9605 NP_001269608 15 9605 NP_932326 15 9605 NP_001157980 15 9605 NP_001157979 15 9605 XP_005269924 15 9605 XP_005269922 15 9605 XP_006717933 15 9605 XP_005269921 15 9605 XP_005246674 15 9605 XP_005246673 15 9605 XP_005246672 15 9605 XP_005246670 15 9605 XP_005246669 15 9605 XP_005246668 15 9605 XP_005246667 15 9605 XP_005246665 15 9605 XP_006712605 15 9605 XP_006712604 15 9605 XP_005246663 15 9605 XP_005246660 15 9605 XP_005246661 15 9605 XP_005246659 15 9605 XP_005246658 15 9605 XP_005246657 15 9605 XP_005246656 15 9605 XP_005246655 15 9605 XP_005246654 15 9605 XP_005246653 15 9605 XP_005246652 15 9605 XP_005246649 15 9605 XP_005246651 15 9605 XP_005246650 15 9605 XP_005246648 15 9605 XP_005246647 15 9605>NP_000537 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 159 AMAIYKQSQ 167>NP_001263689 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119584 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 159 AMAIYKQSQ 167>NP_001119586 Length = 341 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 159 AMAIYKQSQ 167>NP_001263625 Length = 302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119590 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 120 AMAIYKQSQ 128>NP_001263690 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119585 Length = 346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 159 AMAIYKQSQ 167>NP_001263624 Length = 307 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119588 Length = 209 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 27 AMAIYKQSQ 35>NP_001119587 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 27 AMAIYKQSQ 35>NP_001119589 Length = 214 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMA YKQSQ Sbjct: 27 AMAIYKQSQ 35>NP_065783 Length = 2249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2169 MAQYQQSQ 2176>NP_059989 Length = 2236 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2156 MAQYQQSQ 2163>XP_006715590 Length = 2277 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2197 MAQYQQSQ 2204>XP_005267126 Length = 2316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2236 MAQYQQSQ 2243>XP_006715589 Length = 2320 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2240 MAQYQQSQ 2247>XP_006715588 Length = 2330 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2250 MAQYQQSQ 2257>XP_006715587 Length = 2359 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2279 MAQYQQSQ 2286>XP_006715586 Length = 2373 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MANYKQSQ 9 MA Y+QSQ Sbjct: 2293 MAQYQQSQ 2300>NP_001269609 Length = 1460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMANY+ ++ Sbjct: 1049 AMANYESTE 1057>NP_001269610 Length = 1439 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMANY+ ++ Sbjct: 1028 AMANYESTE 1036>NP_001258733 Length = 449 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 A+AN+ QSQ Sbjct: 264 ALANFIQSQ 272>NP_002616 Length = 471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 A+AN+ QSQ Sbjct: 286 ALANFIQSQ 294>NP_001258734 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 A+AN+ QSQ Sbjct: 221 ALANFIQSQ 229>XP_005262071 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 A+AN+ QSQ Sbjct: 263 ALANFIQSQ 271>XP_005251961 Length = 1433 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMANY+ ++ Sbjct: 1022 AMANYESTE 1030>XP_006717107 Length = 1439 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMANY+ ++ Sbjct: 1028 AMANYESTE 1036>XP_006717106 Length = 1460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMANY+ ++ Sbjct: 1049 AMANYESTE 1057>XP_006717105 Length = 1460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMANY+ ++ Sbjct: 1049 AMANYESTE 1057>XP_005251958 Length = 1460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AMANYKQSQ 9 AMANY+ ++ Sbjct: 1049 AMANYESTE 1057>NP_004534 Length = 6669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>NP_006166 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 442 ANYRQS 447>NP_001258137 Length = 8560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>NP_001248392 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 477 ANYRQS 482>NP_001269608 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AMANYKQS 8 AMANY+ + Sbjct: 1049 AMANYEST 1056>NP_932326 Length = 1730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 477 ANYRQS 482>NP_001157980 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>NP_001157979 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005269924 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 477 ANYRQS 482>XP_005269922 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 477 ANYRQS 482>XP_006717933 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 477 ANYRQS 482>XP_005269921 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 442 ANYRQS 447>XP_005246674 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246673 Length = 8018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246672 Length = 8277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246670 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246669 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246668 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246667 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246665 Length = 8339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_006712605 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_006712604 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246663 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246660 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246661 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246659 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246658 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246657 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246656 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246655 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246654 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246653 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246652 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246649 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246651 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246650 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246648 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652>XP_005246647 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ANYKQS 8 ANY+QS Sbjct: 1647 ANYRQS 1652Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.102 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 401,612 Number of extensions: 354 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |