Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001263627 18 1935 NP_001263628 18 1935 NP_001263626 18 1935 NP_065988 17 4312 NP_001971 17 4312 NP_919337 17 4312 XP_005267986 17 4312 XP_006719339 17 4312 XP_005253614 17 4312 XP_005253613 17 4312 NP_005235 16 5631 NP_742108 16 5631 XP_005260384 16 5631 XP_006726617 16 7355 XP_006720409 16 7355 XP_006710039 16 7355 NP_001026 15 9605 NP_001129242 15 9605 NP_001129241 15 9605 NP_001129240 15 9605 NP_006496 15 9605 XP_006726200 15 9605 XP_006726198 15 9605 XP_005275592 15 9605 XP_005275157 15 9605 XP_005259177 15 9605 XP_006711873 15 9605 XP_006711871 15 9605 XP_006711870 15 9605 XP_006711869 15 9605 XP_006711868 15 9605 XP_006711867 15 9605 XP_006711866 15 9605 XP_006711865 15 9605 NP_057119 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 159 AMAIYKQSQ 167>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 159 AMAIYKQSQ 167>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 159 AMAIYKQSQ 167>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 120 AMAIYKQSQ 128>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 159 AMAIYKQSQ 167>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 120 AMAIYKQSQ 128>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 27 AMAIYKQSQ 35>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 27 AMAIYKQSQ 35>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMAIY QSQ Sbjct: 27 AMAIYKQSQ 35>NP_001263627 Length = 182 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 MAIYNQSQ 9 MAIY QSQ Sbjct: 1 MAIYKQSQ 8>NP_001263628 Length = 187 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 MAIYNQSQ 9 MAIY QSQ Sbjct: 1 MAIYKQSQ 8>NP_001263626 Length = 234 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 MAIYNQSQ 9 MAIY QSQ Sbjct: 1 MAIYKQSQ 8>NP_065988 Length = 2048 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IYNQSQ 9 IYNQSQ Sbjct: 597 IYNQSQ 602>NP_001971 Length = 287 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMA YN++Q Sbjct: 129 AMAEYNEAQ 137>NP_919337 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMA YN++Q Sbjct: 129 AMAEYNEAQ 137>XP_005267986 Length = 2022 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IYNQSQ 9 IYNQSQ Sbjct: 571 IYNQSQ 576>XP_006719339 Length = 260 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMA YN++Q Sbjct: 101 AMAEYNEAQ 109>XP_005253614 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMA YN++Q Sbjct: 129 AMAEYNEAQ 137>XP_005253613 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AMAIYNQSQ 9 AMA YN++Q Sbjct: 129 AMAEYNEAQ 137>NP_005235 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMAIYNQSQ 9 AMA Y Q+Q Sbjct: 65 AMAAYGQTQ 73>NP_742108 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMAIYNQSQ 9 AMA Y Q+Q Sbjct: 65 AMAAYGQTQ 73>XP_005260384 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AMAIYNQSQ 9 AMA Y Q+Q Sbjct: 65 AMAAYGQTQ 73>XP_006726617 Length = 1688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AMAIYNQS 8 AMA YNQ+ Sbjct: 1671 AMADYNQA 1678>XP_006720409 Length = 1688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AMAIYNQS 8 AMA YNQ+ Sbjct: 1671 AMADYNQA 1678>XP_006710039 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AMAIYNQS 8 AMA YNQ+ Sbjct: 1567 AMADYNQA 1574>NP_001026 Length = 4967 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2797 SMALYNRTR 2805>NP_001129242 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+++Q+Q Sbjct: 74 SMAVFHQTQ 82>NP_001129241 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+++Q+Q Sbjct: 74 SMAVFHQTQ 82>NP_001129240 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+++Q+Q Sbjct: 74 SMAVFHQTQ 82>NP_006496 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+++Q+Q Sbjct: 74 SMAVFHQTQ 82>XP_006726200 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMAIYNQSQ 9 A+ YNQS+ Sbjct: 105 ALRYYNQSE 113>XP_006726198 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMAIYNQSQ 9 A+ YNQS+ Sbjct: 105 ALRYYNQSE 113>XP_005275592 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMAIYNQSQ 9 A+ YNQS+ Sbjct: 148 ALRYYNQSE 156>XP_005275157 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMAIYNQSQ 9 A+ YNQS+ Sbjct: 148 ALRYYNQSE 156>XP_005259177 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+++Q+Q Sbjct: 74 SMAVFHQTQ 82>XP_006711873 Length = 4954 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2796 SMALYNRTR 2804>XP_006711871 Length = 4906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2807 SMALYNRTR 2815>XP_006711870 Length = 4965 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2807 SMALYNRTR 2815>XP_006711869 Length = 4973 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2807 SMALYNRTR 2815>XP_006711868 Length = 4975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2797 SMALYNRTR 2805>XP_006711867 Length = 4977 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2807 SMALYNRTR 2815>XP_006711866 Length = 4984 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2806 SMALYNRTR 2814>XP_006711865 Length = 4985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AMAIYNQSQ 9 +MA+YN+++ Sbjct: 2807 SMALYNRTR 2815>NP_057119 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AMAIYN 6 AMA+YN Sbjct: 58 AMALYN 63Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.112 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 349,118 Number of extensions: 293 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |