Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_065681                                                              20     509
NP_066124                                                              20     509
XP_006717999                                                           20     509
NP_060899                                                              17    2528
XP_006725524                                                           17    2528
XP_006725523                                                           17    2528
XP_005276828                                                           17    2528
XP_006726279                                                           17    2528
XP_006714722                                                           17    2528
XP_006714721                                                           17    2528
NP_776253                                                              17    4312
NP_001008487                                                           17    4312
NP_001008486                                                           17    4312
NP_001008485                                                           17    4312
NP_060306                                                              17    4312
NP_001157947                                                           17    4312
XP_005247622                                                           17    4312
XP_005247621                                                           17    4312
XP_006713744                                                           17    4312
XP_005247620                                                           17    4312
XP_005247619                                                           17    4312
XP_005247618                                                           17    4312
XP_005247617                                                           17    4312
XP_005247616                                                           17    4312
XP_005245126                                                           17    4312
NP_001159530                                                           16    5631
NP_001265281                                                           16    5631
NP_570718                                                              16    5631
XP_005251533                                                           16    5631
XP_006716840                                                           16    5631
NP_002188                                                              16    5631
NP_001258625                                                           16    7355
NP_001258627                                                           16    7355
NP_004290                                                              16    7355
NP_001258628                                                           16    7355
NP_001258626                                                           16    7355
NP_001805                                                              16    7355
NP_775802                                                              16    7355
NP_115524                                                              16    7355
XP_005276360                                                           16    7355
XP_006726297                                                           16    7355
XP_006726295                                                           16    7355
XP_006722726                                                           16    7355
XP_006722725                                                           16    7355
XP_005259840                                                           16    7355
XP_005269237                                                           16    7355
XP_005269236                                                           16    7355
XP_005269235                                                           16    7355
XP_006719693                                                           16    7355
XP_005269233                                                           16    7355
NP_055927                                                              15    9605
NP_004127                                                              15    9605
NP_003244                                                              15    9605
NP_653267                                                              15    9605
NP_006827                                                              15    9605
NP_067646                                                              15    9605
NP_060910                                                              15    9605
XP_005261097                                                           15    9605
XP_005261096                                                           15    9605
XP_005261095                                                           15    9605
XP_005261094                                                           15    9605
XP_006722562                                                           15    9605
XP_006722561                                                           15    9605
XP_006722560                                                           15    9605
XP_006722559                                                           15    9605
XP_005266781                                                           15    9605
XP_006722558                                                           15    9605
XP_005266780                                                           15    9605
XP_005266779                                                           15    9605
XP_006716525                                                           15    9605
XP_006716524                                                           15    9605
XP_006711541                                                           15    9605
XP_005245460                                                           15    9605
XP_005270716                                                           15    9605
XP_006710540                                                           15    9605
XP_006710539                                                           15    9605
XP_005270713                                                           15    9605
XP_005270712                                                           15    9605
XP_005270711                                                           15    9605
XP_005270710                                                           15    9605
XP_006710538                                                           15    9605
XP_005270709                                                           15    9605
NP_060651                                                              15    9605
>NP_065681
          Length = 1072

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   ALTMGDLIT 9
           ALTMGDLI+
Sbjct: 845 ALTMGDLIS 853
>NP_066124
          Length = 1114

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   ALTMGDLIT 9
           ALTMGDLI+
Sbjct: 845 ALTMGDLIS 853
>XP_006717999
          Length = 1207

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   ALTMGDLIT 9
           ALTMGDLI+
Sbjct: 938 ALTMGDLIS 946
>NP_060899
          Length = 2624

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            LTMGDL+
Sbjct: 1990 LTMGDLV 1996
>XP_006725524
          Length = 2584

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            LTMGDL+
Sbjct: 1990 LTMGDLV 1996
>XP_006725523
          Length = 2623

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            LTMGDL+
Sbjct: 1990 LTMGDLV 1996
>XP_005276828
          Length = 2584

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            LTMGDL+
Sbjct: 1990 LTMGDLV 1996
>XP_006726279
          Length = 2623

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            LTMGDL+
Sbjct: 1990 LTMGDLV 1996
>XP_006714722
          Length = 2584

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            LTMGDL+
Sbjct: 1990 LTMGDLV 1996
>XP_006714721
          Length = 2623

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            LTMGDL+
Sbjct: 1990 LTMGDLV 1996
>NP_776253
          Length = 513

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 258 AASLGDLIT 266
>NP_001008487
          Length = 461

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 199 AASLGDLIT 207
>NP_001008486
          Length = 471

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 189 AASLGDLIT 197
>NP_001008485
          Length = 507

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 225 AASLGDLIT 233
>NP_060306
          Length = 487

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 225 AASLGDLIT 233
>NP_001157947
          Length = 370

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 108 AASLGDLIT 116
>XP_005247622
          Length = 481

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 199 AASLGDLIT 207
>XP_005247621
          Length = 502

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 240 AASLGDLIT 248
>XP_006713744
          Length = 507

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 225 AASLGDLIT 233
>XP_005247620
          Length = 507

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 225 AASLGDLIT 233
>XP_005247619
          Length = 507

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 225 AASLGDLIT 233
>XP_005247618
          Length = 507

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 225 AASLGDLIT 233
>XP_005247617
          Length = 522

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 240 AASLGDLIT 248
>XP_005247616
          Length = 522

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 240 AASLGDLIT 248
>XP_005245126
          Length = 513

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   ALTMGDLIT 9
           A ++GDLIT
Sbjct: 258 AASLGDLIT 266
>NP_001159530
          Length = 730

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT G +IT
Sbjct: 34 ALTQGSMIT 42
>NP_001265281
          Length = 889

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ALTMGDLI 8
           A+T GDL+
Sbjct: 520 AITQGDLV 527
>NP_570718
          Length = 754

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT G +IT
Sbjct: 34 ALTQGSMIT 42
>XP_005251533
          Length = 889

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ALTMGDLI 8
           A+T GDL+
Sbjct: 520 AITQGDLV 527
>XP_006716840
          Length = 897

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ALTMGDLI 8
           A+T GDL+
Sbjct: 528 AITQGDLV 535
>NP_002188
          Length = 889

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ALTMGDLI 8
           A+T GDL+
Sbjct: 520 AITQGDLV 527
>NP_001258625
          Length = 752

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTMGDLI 8
           LT+GDL+
Sbjct: 405 LTVGDLV 411
>NP_001258627
          Length = 726

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTMGDLI 8
           LT+GDL+
Sbjct: 379 LTVGDLV 385
>NP_004290
          Length = 753

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTMGDLI 8
           LT+GDL+
Sbjct: 406 LTVGDLV 412
>NP_001258628
          Length = 713

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTMGDLI 8
           LT+GDL+
Sbjct: 366 LTVGDLV 372
>NP_001258626
          Length = 712

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTMGDLI 8
           LT+GDL+
Sbjct: 365 LTVGDLV 371
>NP_001805
          Length = 463

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LTMGDLI 8
           LT+GD+I
Sbjct: 196 LTLGDMI 202
>NP_775802
          Length = 542

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT  DLIT
Sbjct: 78 ALTKPDLIT 86
>NP_115524
          Length = 573

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ALTMGDLIT 9
           A + GDLIT
Sbjct: 319 AASFGDLIT 327
>XP_005276360
          Length = 43

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  LTMGDLIT 9
          LT+GDL T
Sbjct: 29 LTLGDLPT 36
>XP_006726297
          Length = 479

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT  DLIT
Sbjct: 15 ALTKPDLIT 23
>XP_006726295
          Length = 541

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT  DLIT
Sbjct: 77 ALTKPDLIT 85
>XP_006722726
          Length = 479

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT  DLIT
Sbjct: 15 ALTKPDLIT 23
>XP_006722725
          Length = 479

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT  DLIT
Sbjct: 15 ALTKPDLIT 23
>XP_005259840
          Length = 541

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  ALTMGDLIT 9
          ALT  DLIT
Sbjct: 77 ALTKPDLIT 85
>XP_005269237
          Length = 527

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ALTMGDLIT 9
           A + GDLIT
Sbjct: 319 AASFGDLIT 327
>XP_005269236
          Length = 573

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ALTMGDLIT 9
           A + GDLIT
Sbjct: 319 AASFGDLIT 327
>XP_005269235
          Length = 573

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ALTMGDLIT 9
           A + GDLIT
Sbjct: 319 AASFGDLIT 327
>XP_006719693
          Length = 573

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ALTMGDLIT 9
           A + GDLIT
Sbjct: 319 AASFGDLIT 327
>XP_005269233
          Length = 573

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   ALTMGDLIT 9
           A + GDLIT
Sbjct: 319 AASFGDLIT 327
>NP_055927
          Length = 1798

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1151 LRQGDLIT 1158
>NP_004127
          Length = 963

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   ALTMGDLIT 9
           A+  GDL+T
Sbjct: 595 AVKQGDLVT 603
>NP_003244
          Length = 1591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            L+MGDL+
Sbjct: 1262 LSMGDLL 1268
>NP_653267
          Length = 4753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    LTMGDLIT 9
            LT+G L+T
Sbjct: 1121 LTLGQLLT 1128
>NP_006827
          Length = 2671

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    ALTMGDLI 8
            A T+GDL+
Sbjct: 1946 ARTLGDLV 1953
>NP_067646
          Length = 568

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ALTMGDLI 8
           A T+GD+I
Sbjct: 374 ATTLGDMI 381
>NP_060910
          Length = 432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  ALTMGDLIT 9
          ALT GD+++
Sbjct: 86 ALTNGDILS 94
>XP_005261097
          Length = 1452

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            L+MGDL+
Sbjct: 1262 LSMGDLL 1268
>XP_005261096
          Length = 1591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            L+MGDL+
Sbjct: 1262 LSMGDLL 1268
>XP_005261095
          Length = 1591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            L+MGDL+
Sbjct: 1262 LSMGDLL 1268
>XP_005261094
          Length = 1591

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    LTMGDLI 8
            L+MGDL+
Sbjct: 1262 LSMGDLL 1268
>XP_006722562
          Length = 1060

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_006722561
          Length = 1094

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_006722560
          Length = 1295

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_006722559
          Length = 1297

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_005266781
          Length = 1301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_006722558
          Length = 1301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_005266780
          Length = 1301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_005266779
          Length = 1301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
>XP_006716525
          Length = 432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  ALTMGDLIT 9
          ALT GD+++
Sbjct: 86 ALTNGDILS 94
>XP_006716524
          Length = 432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  ALTMGDLIT 9
          ALT GD+++
Sbjct: 86 ALTNGDILS 94
>XP_006711541
          Length = 509

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ALTMGDLI 8
           A T+GD+I
Sbjct: 412 ATTLGDMI 419
>XP_005245460
          Length = 606

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ALTMGDLI 8
           A T+GD+I
Sbjct: 412 ATTLGDMI 419
>XP_005270716
          Length = 1332

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1158 LRQGDLIT 1165
>XP_006710540
          Length = 1655

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1008 LRQGDLIT 1015
>XP_006710539
          Length = 1683

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1036 LRQGDLIT 1043
>XP_005270713
          Length = 1711

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1064 LRQGDLIT 1071
>XP_005270712
          Length = 1720

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1073 LRQGDLIT 1080
>XP_005270711
          Length = 1797

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1151 LRQGDLIT 1158
>XP_005270710
          Length = 1804

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1158 LRQGDLIT 1165
>XP_006710538
          Length = 1804

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1157 LRQGDLIT 1164
>XP_005270709
          Length = 1805

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LTMGDLIT 9
            L  GDLIT
Sbjct: 1158 LRQGDLIT 1165
>NP_060651
          Length = 1301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2 LTMGDLIT 9
         +TMGD+ T
Sbjct: 1 MTMGDMKT 8
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.325    0.139    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 446,922
Number of extensions: 568
Number of successful extensions: 83
Number of sequences better than 10000.0: 83
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 83
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

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