Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 509 NP_653080 20 509 XP_005267292 20 509 XP_005267291 20 509 XP_005267290 20 509 NP_001264992 18 1935 XP_006722588 18 1935 NP_689578 17 2528 XP_005245792 17 2528 NP_000171 17 4312 NP_001265546 17 4312 NP_001265545 17 4312 NP_004327 17 4312 NP_060896 16 5631 XP_005249274 16 5631 XP_005249273 16 5631 XP_005249272 16 5631 XP_005249271 16 5631 XP_006715198 16 5631 XP_005249269 16 5631 XP_005249270 16 5631 XP_005249268 16 5631 NP_056541 16 7355 NP_060021 15 9605 NP_001167558 15 9605 NP_858045 15 9605 NP_006525 15 9605 NP_001167559 15 9605 NP_113584 15 9605 NP_060060 15 9605 NP_919288 15 9605 XP_005262029 15 9605 XP_005262028 15 9605 XP_005262026 15 9605 XP_006724637 15 9605 XP_005262025 15 9605 XP_005262024 15 9605 XP_005262023 15 9605 XP_005262022 15 9605 XP_006717867 15 9605>NP_005091 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTDTDASG 9 AL DTDASG Sbjct: 1713 ALADTDASG 1721>NP_653080 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTDTDASG 9 AL DTDASG Sbjct: 1615 ALADTDASG 1623>XP_005267292 Length = 1677 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTDTDASG 9 AL DTDASG Sbjct: 1608 ALADTDASG 1616>XP_005267291 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTDTDASG 9 AL DTDASG Sbjct: 1615 ALADTDASG 1623>XP_005267290 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALTDTDASG 9 AL DTDASG Sbjct: 1713 ALADTDASG 1721>NP_001264992 Length = 1015 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LTDTDASG 9 +TD+DASG Sbjct: 902 ITDSDASG 909>XP_006722588 Length = 1015 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LTDTDASG 9 +TD+DASG Sbjct: 902 ITDSDASG 909>NP_689578 Length = 398 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TDTDASG 9 TDTD+SG Sbjct: 384 TDTDSSG 390>XP_005245792 Length = 398 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TDTDASG 9 TDTD+SG Sbjct: 384 TDTDSSG 390>NP_000171 Length = 1103 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTDTDASG 9 L DTDA+G Sbjct: 404 LLDTDAAG 411>NP_001265546 Length = 1028 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTDTDAS 8 LTDTDA+ Sbjct: 700 LTDTDAA 706>NP_001265545 Length = 1065 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTDTDAS 8 LTDTDA+ Sbjct: 680 LTDTDAA 686>NP_004327 Length = 1085 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTDTDAS 8 LTDTDA+ Sbjct: 700 LTDTDAA 706>NP_060896 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 812 ALTDTD 817>XP_005249274 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 812 ALTDTD 817>XP_005249273 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 794 ALTDTD 799>XP_005249272 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 799 ALTDTD 804>XP_005249271 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 808 ALTDTD 813>XP_006715198 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 812 ALTDTD 817>XP_005249269 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 812 ALTDTD 817>XP_005249270 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 812 ALTDTD 817>XP_005249268 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ALTDTD 6 ALTDTD Sbjct: 821 ALTDTD 826>NP_056541 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TDTDASG 9 TDT++SG Sbjct: 67 TDTESSG 73>NP_060021 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ALTDTDAS 8 ALTD D S Sbjct: 750 ALTDDDCS 757>NP_001167558 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTDTDASG 9 L++TDA+G Sbjct: 1061 LSNTDATG 1068>NP_858045 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTDTDASG 9 L++TDA+G Sbjct: 1061 LSNTDATG 1068>NP_006525 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTDTDASG 9 L++TDA+G Sbjct: 1061 LSNTDATG 1068>NP_001167559 Length = 1415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTDTDASG 9 L++TDA+G Sbjct: 1056 LSNTDATG 1063>NP_113584 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2019 ASTETSASG 2027>NP_060060 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TDTDASG 9 +D+DASG Sbjct: 873 SDSDASG 879>NP_919288 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTDTDASG 9 L D DASG Sbjct: 97 LQDQDASG 104>XP_005262029 Length = 4240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2019 ASTETSASG 2027>XP_005262028 Length = 4341 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2019 ASTETSASG 2027>XP_005262026 Length = 4359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2019 ASTETSASG 2027>XP_006724637 Length = 4365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2010 ASTETSASG 2018>XP_005262025 Length = 4373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2018 ASTETSASG 2026>XP_005262024 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2019 ASTETSASG 2027>XP_005262023 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2019 ASTETSASG 2027>XP_005262022 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ALTDTDASG 9 A T+T ASG Sbjct: 2019 ASTETSASG 2027>XP_006717867 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ALTDTDAS 8 ALTD D S Sbjct: 750 ALTDDDCS 757Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.115 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 560,253 Number of extensions: 1011 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |