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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_055221                                                              16    7355
NP_001123564                                                           16    7355
NP_001123563                                                           16    7355
NP_001123562                                                           16    7355
NP_115997                                                              16    7355
NP_112584                                                              16    7355
XP_006724404                                                           16    7355
XP_006724403                                                           16    7355
XP_005261845                                                           16    7355
XP_005261844                                                           16    7355
XP_005261843                                                           16    7355
XP_005256867                                                           16    7355
XP_006721647                                                           16    7355
XP_006721646                                                           16    7355
NP_060264                                                              15    9605
NP_060743                                                              15    9605
XP_005251551                                                           15    9605
XP_006716857                                                           15    9605

>NP_055221
          Length = 557

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2  LSSLAAVR 9
          LSSLAAV+
Sbjct: 34 LSSLAAVQ 41



>NP_001123564
          Length = 457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LSSLAAVR 9
           LSSL+A+R
Sbjct: 332 LSSLSAIR 339



>NP_001123563
          Length = 457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LSSLAAVR 9
           LSSL+A+R
Sbjct: 332 LSSLSAIR 339



>NP_001123562
          Length = 523

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LSSLAAVR 9
           LSSL+A+R
Sbjct: 332 LSSLSAIR 339



>NP_115997
          Length = 2567

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3    SSLAAVR 9
            SSLAAVR
Sbjct: 1166 SSLAAVR 1172



>NP_112584
          Length = 523

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LSSLAAVR 9
           LSSL+A+R
Sbjct: 332 LSSLSAIR 339



>XP_006724404
          Length = 1442

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3    SSLAAVR 9
            SSLAAVR
Sbjct: 1167 SSLAAVR 1173



>XP_006724403
          Length = 2449

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3    SSLAAVR 9
            SSLAAVR
Sbjct: 1048 SSLAAVR 1054



>XP_005261845
          Length = 2568

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3    SSLAAVR 9
            SSLAAVR
Sbjct: 1167 SSLAAVR 1173



>XP_005261844
          Length = 2568

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3    SSLAAVR 9
            SSLAAVR
Sbjct: 1167 SSLAAVR 1173



>XP_005261843
          Length = 2568

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3    SSLAAVR 9
            SSLAAVR
Sbjct: 1167 SSLAAVR 1173



>XP_005256867
          Length = 457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LSSLAAVR 9
           LSSL+A+R
Sbjct: 332 LSSLSAIR 339



>XP_006721647
          Length = 476

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LSSLAAVR 9
           LSSL+A+R
Sbjct: 351 LSSLSAIR 358



>XP_006721646
          Length = 542

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   LSSLAAVR 9
           LSSL+A+R
Sbjct: 351 LSSLSAIR 358



>NP_060264
          Length = 1801

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   ALSSLAAV 8
           ALSSLA V
Sbjct: 963 ALSSLAVV 970



>NP_060743
          Length = 459

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 1  ALSSLAA 7
          ALSSLAA
Sbjct: 43 ALSSLAA 49



>XP_005251551
          Length = 1801

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   ALSSLAAV 8
           ALSSLA V
Sbjct: 963 ALSSLAVV 970



>XP_006716857
          Length = 1834

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1    ALSSLAAV 8
            ALSSLA V
Sbjct: 996  ALSSLAVV 1003



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.318    0.117    0.254 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 209,079
Number of extensions: 209
Number of successful extensions: 18
Number of sequences better than 10000.0: 18
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 18
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)