Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 20 509 NP_009297 20 509 NP_001103224 19 869 NP_848652 19 869 XP_006719593 19 869 XP_006719591 19 869 XP_006710219 19 869 NP_001186127 18 1935 NP_060779 18 1935 NP_659491 18 1935 XP_006726780 17 2528 XP_006721690 17 2528 XP_006710091 17 2528 NP_064629 17 2528 NP_789787 17 4312 NP_001019831 16 5631 NP_009049 16 5631 NP_002536 16 5631 NP_001012393 16 5631 NP_001122312 16 5631 NP_001122311 16 5631 XP_005271636 16 5631 XP_005271635 16 5631 XP_005271632 16 5631 XP_006718909 16 5631 XP_005271631 16 5631 XP_006714558 16 5631 XP_006713877 16 5631 XP_006713876 16 5631 XP_006713875 16 5631 XP_006713874 16 5631 XP_006713873 16 5631 XP_005265505 16 5631 NP_064610 16 7355 NP_116117 16 7355 NP_002477 16 7355 XP_006723284 16 7355 XP_006717182 16 7355 XP_006717181 16 7355 XP_005252054 16 7355 XP_005263199 16 7355 NP_115512 16 7355 NP_001094842 16 7355 NP_062545 16 7355 NP_057658 15 9605 NP_000786 15 9605 NP_006500 15 9605 NP_066363 15 9605 NP_001158001 15 9605 NP_062826 15 9605 NP_001275631 15 9605 NP_001275632 15 9605 NP_001116362 15 9605 XP_006723899 15 9605 XP_005259268 15 9605 XP_005259185 15 9605 XP_005259184 15 9605 XP_006718837 15 9605 XP_005271482 15 9605 XP_005249232 15 9605 NP_060426 15 9605 NP_001158002 15 9605 NP_001157999 15 9605 NP_009065 15 9605>NP_005148 Length = 1130 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ALCLAISRS 9 ALCLAISR+ Sbjct: 1038 ALCLAISRN 1046>NP_009297 Length = 1149 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ALCLAISRS 9 ALCLAISR+ Sbjct: 1057 ALCLAISRN 1065>NP_001103224 Length = 2215 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLAIS S Sbjct: 66 ALCLAISNS 74>NP_848652 Length = 302 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC A+SRS Sbjct: 126 ALCFAVSRS 134>XP_006719593 Length = 1304 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLAIS S Sbjct: 66 ALCLAISNS 74>XP_006719591 Length = 2230 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLAIS S Sbjct: 66 ALCLAISNS 74>XP_006710219 Length = 218 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC A+SRS Sbjct: 42 ALCFAVSRS 50>NP_001186127 Length = 699 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLAIS S Sbjct: 315 ALCLAISVS 323>NP_060779 Length = 684 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLAIS S Sbjct: 315 ALCLAISVS 323>NP_659491 Length = 620 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 CLAISRS 9 CLAISRS Sbjct: 69 CLAISRS 75>XP_006726780 Length = 293 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLA+S S Sbjct: 215 ALCLAVSVS 223>XP_006721690 Length = 293 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLA+S S Sbjct: 215 ALCLAVSVS 223>XP_006710091 Length = 293 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALCLA+S S Sbjct: 215 ALCLAVSVS 223>NP_064629 Length = 406 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ALCLAISR 8 ALCL ISR Sbjct: 368 ALCLQISR 375>NP_789787 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LCLAISR 8 LCL+ISR Sbjct: 58 LCLSISR 64>NP_001019831 Length = 2986 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC++ SRS Sbjct: 1705 ALCISHSRS 1713>NP_009049 Length = 3097 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +LC+A SRS Sbjct: 1715 SLCIAHSRS 1723>NP_002536 Length = 345 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLAI R Sbjct: 156 LCLAIGR 162>NP_001012393 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLAI R Sbjct: 149 LCLAIGR 155>NP_001122312 Length = 2161 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +LC AIS+S Sbjct: 491 SLCQAISKS 499>NP_001122311 Length = 2137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +LC AIS+S Sbjct: 491 SLCQAISKS 499>XP_005271636 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLAI R Sbjct: 18 LCLAIGR 24>XP_005271635 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLAI R Sbjct: 56 LCLAIGR 62>XP_005271632 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLAI R Sbjct: 156 LCLAIGR 162>XP_006718909 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLAI R Sbjct: 149 LCLAIGR 155>XP_005271631 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLAI R Sbjct: 156 LCLAIGR 162>XP_006714558 Length = 2612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +LC+A SRS Sbjct: 1230 SLCIAHSRS 1238>XP_006713877 Length = 2956 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC++ SRS Sbjct: 1707 ALCISHSRS 1715>XP_006713876 Length = 2966 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC++ SRS Sbjct: 1685 ALCISHSRS 1693>XP_006713875 Length = 2975 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC++ SRS Sbjct: 1694 ALCISHSRS 1702>XP_006713874 Length = 2979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC++ SRS Sbjct: 1698 ALCISHSRS 1706>XP_006713873 Length = 2988 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 ALC++ SRS Sbjct: 1707 ALCISHSRS 1715>XP_005265505 Length = 2146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +LC AIS+S Sbjct: 491 SLCQAISKS 499>NP_064610 Length = 926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LCLAIS 7 LCLAIS Sbjct: 78 LCLAIS 83>NP_116117 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ALCLAISR 8 ALC+ +SR Sbjct: 222 ALCVGLSR 229>NP_002477 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALCLAIS 7 ALCLA++ Sbjct: 501 ALCLAVA 507>XP_006723284 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLA+ R Sbjct: 171 LCLAVGR 177>XP_006717182 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALCLAIS 7 ALCLA++ Sbjct: 311 ALCLAVA 317>XP_006717181 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALCLAIS 7 ALCLA++ Sbjct: 311 ALCLAVA 317>XP_005252054 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALCLAIS 7 ALCLA++ Sbjct: 434 ALCLAVA 440>XP_005263199 Length = 863 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LCLAIS 7 LCLAIS Sbjct: 78 LCLAIS 83>NP_115512 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ALCLAISR 8 A+C A+SR Sbjct: 575 AVCAAVSR 582>NP_001094842 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLA+ R Sbjct: 153 LCLAVGR 159>NP_062545 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLAISR 8 CLA+SR Sbjct: 50 CLAVSR 55>NP_057658 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCLAISR 8 +C+A+SR Sbjct: 55 VCMAVSR 61>NP_000786 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCLAISR 8 +C+A+SR Sbjct: 55 VCMAVSR 61>NP_006500 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +L LA+SRS Sbjct: 42 SLSLAVSRS 50>NP_066363 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LCLAISRS 9 +C+A+SR+ Sbjct: 1217 ICVALSRA 1224>NP_001158001 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLA+ R Sbjct: 17 LCLAVRR 23>NP_062826 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ALCLAIS 7 ++CLAIS Sbjct: 99 SICLAIS 105>NP_001275631 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ALCLAI 6 ALCLA+ Sbjct: 139 ALCLAV 144>NP_001275632 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ALCLAI 6 ALCLA+ Sbjct: 133 ALCLAV 138>NP_001116362 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ALCLAI 6 ALCLA+ Sbjct: 133 ALCLAV 138>XP_006723899 Length = 1918 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LCLAISRS 9 +C+A+SR+ Sbjct: 1217 ICVALSRA 1224>XP_005259268 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLA+ R Sbjct: 17 LCLAVRR 23>XP_005259185 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +L LA+SRS Sbjct: 42 SLSLAVSRS 50>XP_005259184 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ALCLAISRS 9 +L LA+SRS Sbjct: 42 SLSLAVSRS 50>XP_006718837 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCLAISR 8 +C+A+SR Sbjct: 55 VCMAVSR 61>XP_005271482 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LCLAISR 8 +C+A+SR Sbjct: 55 VCMAVSR 61>XP_005249232 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LCLAIS 7 LCLA+S Sbjct: 97 LCLAVS 102>NP_060426 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCL +SR Sbjct: 107 LCLEVSR 113>NP_001158002 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLA+ R Sbjct: 17 LCLAVRR 23>NP_001157999 Length = 123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLA+ R Sbjct: 17 LCLAVRR 23>NP_009065 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LCLAISR 8 LCLA+ R Sbjct: 17 LCLAVRR 23Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.131 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 579,499 Number of extensions: 641 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |