Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000360                                                              20     509
XP_005268094                                                           20     509
XP_005270768                                                           18    1135
NP_036448                                                              18    1135
NP_036441                                                              18    1482
NP_573573                                                              18    1482
NP_852111                                                              18    1482
NP_000136                                                              18    1482
XP_005277989                                                           18    1482
XP_006718541                                                           18    1482
XP_006718540                                                           18    1482
XP_005277987                                                           18    1482
NP_003831                                                              18    1935
NP_079455                                                              17    3301
NP_065962                                                              17    3301
NP_059984                                                              17    3301
NP_115618                                                              17    3301
XP_005274763                                                           17    3301
XP_006724892                                                           17    3301
XP_005274762                                                           17    3301
XP_005250743                                                           17    3301
XP_006716234                                                           17    3301
XP_006713726                                                           17    3301
XP_005273221                                                           17    3301
NP_000224                                                              17    4312
NP_149043                                                              17    4312
XP_005264366                                                           17    4312
XP_006712078                                                           17    4312
NP_620711                                                              16    5631
XP_005247007                                                           16    5631
NP_775766                                                              16    7355
NP_060661                                                              16    7355
NP_057332                                                              16    7355
NP_542170                                                              16    7355
NP_008829                                                              16    7355
XP_005260667                                                           16    7355
XP_005260668                                                           16    7355
XP_005266498                                                           16    7355
XP_005266307                                                           16    7355
XP_005266306                                                           16    7355
XP_005266305                                                           16    7355
XP_005266304                                                           16    7355
XP_006712540                                                           16    7355
XP_005246569                                                           16    7355
XP_005246570                                                           16    7355
XP_005246568                                                           16    7355
XP_005246566                                                           16    7355
XP_005246567                                                           16    7355
NP_001276337                                                           15    9605
NP_001276338                                                           15    9605
NP_000525                                                              15    9605
NP_001121615                                                           15    9605
NP_001121616                                                           15    9605
NP_001182502                                                           15    9605
NP_001258211                                                           15    9605
NP_085124                                                              15    9605
NP_803187                                                              15    9605
NP_067652                                                              15    9605
NP_061875                                                              15    9605
NP_002255                                                              15    9605
NP_001275517                                                           15    9605
NP_001002843                                                           15    9605
NP_060131                                                              15    9605
NP_001012301                                                           15    9605
NP_055986                                                              15    9605
NP_631938                                                              15    9605
NP_006687                                                              15    9605
NP_001271203                                                           15    9605
NP_078866                                                              15    9605
NP_001157798                                                           15    9605
NP_877497                                                              15    9605
NP_775922                                                              15    9605
NP_001257869                                                           15    9605
XP_005255255                                                           15    9605
XP_005255254                                                           15    9605
XP_005255252                                                           15    9605
XP_005254538                                                           15    9605
XP_005269612                                                           15    9605
XP_005271922                                                           15    9605
XP_005271921                                                           15    9605
XP_005271918                                                           15    9605
XP_006714588                                                           15    9605
XP_005271917                                                           15    9605
XP_005271912                                                           15    9605
XP_005271916                                                           15    9605
XP_005271914                                                           15    9605
XP_006714587                                                           15    9605
XP_005271913                                                           15    9605
XP_005263269                                                           15    9605
XP_005263268                                                           15    9605
XP_005247496                                                           15    9605
XP_005247494                                                           15    9605
XP_006712659                                                           15    9605
XP_005246706                                                           15    9605
XP_005246704                                                           15    9605
XP_005264434                                                           15    9605
XP_005264433                                                           15    9605
XP_005264432                                                           15    9605
XP_005264431                                                           15    9605
XP_005271152                                                           15    9605
XP_005271151                                                           15    9605
>NP_000360
          Length = 764

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   AKVSNCLPM 9
           AKVS CLPM
Sbjct: 564 AKVSICLPM 572
>XP_005268094
          Length = 764

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   AKVSNCLPM 9
           AKVS CLPM
Sbjct: 564 AKVSICLPM 572
>XP_005270768
          Length = 566

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   AKVSNCLPM 9
           AKVS CLP+
Sbjct: 278 AKVSPCLPV 286
>NP_036448
          Length = 536

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   AKVSNCLPM 9
           AKVS CLP+
Sbjct: 248 AKVSPCLPV 256
>NP_036441
          Length = 1849

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    AKVSNCLP 8
            A +SNCLP
Sbjct: 1466 ASLSNCLP 1473
>NP_573573
          Length = 1261

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +SNCLP
Sbjct: 878 ASLSNCLP 885
>NP_852111
          Length = 669

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   KVSNCLPM 9
           KVS CLPM
Sbjct: 487 KVSICLPM 494
>NP_000136
          Length = 695

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   KVSNCLPM 9
           KVS CLPM
Sbjct: 513 KVSICLPM 520
>XP_005277989
          Length = 1470

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    AKVSNCLP 8
            A +SNCLP
Sbjct: 1087 ASLSNCLP 1094
>XP_006718541
          Length = 1839

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    AKVSNCLP 8
            A +SNCLP
Sbjct: 1456 ASLSNCLP 1463
>XP_006718540
          Length = 1842

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    AKVSNCLP 8
            A +SNCLP
Sbjct: 1459 ASLSNCLP 1466
>XP_005277987
          Length = 1849

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    AKVSNCLP 8
            A +SNCLP
Sbjct: 1466 ASLSNCLP 1473
>NP_003831
          Length = 386

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KVSNCLP 8
           KVSNC P
Sbjct: 168 KVSNCTP 174
>NP_079455
          Length = 1894

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1740 SNCLPL 1745
>NP_065962
          Length = 1894

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1740 SNCLPL 1745
>NP_059984
          Length = 1871

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1717 SNCLPL 1722
>NP_115618
          Length = 1896

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1742 SNCLPL 1747
>XP_005274763
          Length = 1789

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1635 SNCLPL 1640
>XP_006724892
          Length = 1841

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1687 SNCLPL 1692
>XP_005274762
          Length = 1853

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1699 SNCLPL 1704
>XP_005250743
          Length = 1894

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1740 SNCLPL 1745
>XP_006716234
          Length = 1894

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1740 SNCLPL 1745
>XP_006713726
          Length = 1910

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1756 SNCLPL 1761
>XP_005273221
          Length = 1974

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SNCLPM 9
            SNCLP+
Sbjct: 1820 SNCLPL 1825
>NP_000224
          Length = 699

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KVSNCLPM 9
           KVS C PM
Sbjct: 510 KVSICFPM 517
>NP_149043
          Length = 1018

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   KVSNCLPM 9
           +VS+C+P+
Sbjct: 975 RVSDCIPL 982
>XP_005264366
          Length = 380

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KVSNCLPM 9
           KVS C PM
Sbjct: 191 KVSICFPM 198
>XP_006712078
          Length = 389

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KVSNCLPM 9
           KVS C PM
Sbjct: 200 KVSICFPM 207
>NP_620711
          Length = 737

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   KVSNCLP 8
           KVS C+P
Sbjct: 303 KVSTCVP 309
>XP_005247007
          Length = 696

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   KVSNCLP 8
           KVS C+P
Sbjct: 303 KVSTCVP 309
>NP_775766
          Length = 888

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 5/7 (71%)

Query: 3   VSNCLPM 9
           + NC PM
Sbjct: 765 IDNCAPM 771
>NP_060661
          Length = 531

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KVSNCL 7
           KV+NCL
Sbjct: 173 KVTNCL 178
>NP_057332
          Length = 1901

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    AKVSNCL 7
            AKV NC+
Sbjct: 1275 AKVRNCM 1281
>NP_542170
          Length = 485

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           +SNC+P
Sbjct: 217 LSNCIP 222
>NP_008829
          Length = 432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +S+CLP
Sbjct: 317 APLSSCLP 324
>XP_005260667
          Length = 485

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           +SNC+P
Sbjct: 217 LSNCIP 222
>XP_005260668
          Length = 485

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           +SNC+P
Sbjct: 217 LSNCIP 222
>XP_005266498
          Length = 531

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KVSNCL 7
           KV+NCL
Sbjct: 173 KVTNCL 178
>XP_005266307
          Length = 1796

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    AKVSNCL 7
            AKV NC+
Sbjct: 1275 AKVRNCM 1281
>XP_005266306
          Length = 1824

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    AKVSNCL 7
            AKV NC+
Sbjct: 1275 AKVRNCM 1281
>XP_005266305
          Length = 1856

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    AKVSNCL 7
            AKV NC+
Sbjct: 1230 AKVRNCM 1236
>XP_005266304
          Length = 1873

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    AKVSNCL 7
            AKV NC+
Sbjct: 1275 AKVRNCM 1281
>XP_006712540
          Length = 432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +S+CLP
Sbjct: 317 APLSSCLP 324
>XP_005246569
          Length = 432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +S+CLP
Sbjct: 317 APLSSCLP 324
>XP_005246570
          Length = 432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +S+CLP
Sbjct: 317 APLSSCLP 324
>XP_005246568
          Length = 432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +S+CLP
Sbjct: 317 APLSSCLP 324
>XP_005246566
          Length = 432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +S+CLP
Sbjct: 317 APLSSCLP 324
>XP_005246567
          Length = 432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   AKVSNCLP 8
           A +S+CLP
Sbjct: 317 APLSSCLP 324
>NP_001276337
          Length = 756

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 662 MANCLP 667
>NP_001276338
          Length = 756

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 662 MANCLP 667
>NP_000525
          Length = 932

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 838 MANCLP 843
>NP_001121615
          Length = 893

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 799 MANCLP 804
>NP_001121616
          Length = 770

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 676 MANCLP 681
>NP_001182502
          Length = 1829

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    KVSNC 6
            KVSNC
Sbjct: 1350 KVSNC 1354
>NP_001258211
          Length = 1922

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    KVSNC 6
            KVSNC
Sbjct: 1350 KVSNC 1354
>NP_085124
          Length = 1922

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    KVSNC 6
            KVSNC
Sbjct: 1350 KVSNC 1354
>NP_803187
          Length = 1922

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2    KVSNC 6
            KVSNC
Sbjct: 1350 KVSNC 1354
>NP_067652
          Length = 474

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NCLP+
Sbjct: 406 NCLPL 410
>NP_061875
          Length = 926

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   AKVSNC 6
           +K+SNC
Sbjct: 740 SKISNC 745
>NP_002255
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   AKVSNCL 7
           AKVS CL
Sbjct: 250 AKVSPCL 256
>NP_001275517
          Length = 979

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   KVSNCLP 8
           KVS C+P
Sbjct: 725 KVSVCIP 731
>NP_001002843
          Length = 966

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   KVSNCLP 8
           KVS C+P
Sbjct: 712 KVSVCIP 718
>NP_060131
          Length = 979

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   KVSNCLP 8
           KVS C+P
Sbjct: 725 KVSVCIP 731
>NP_001012301
          Length = 569

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NCLP+
Sbjct: 122 NCLPL 126
>NP_055986
          Length = 1125

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 323 NCVPM 327
>NP_631938
          Length = 1235

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 338 NCVPM 342
>NP_006687
          Length = 951

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 411 NCVPM 415
>NP_001271203
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   SNCLPM 9
           +NCLP+
Sbjct: 739 TNCLPV 744
>NP_078866
          Length = 599

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NCLP+
Sbjct: 151 NCLPL 155
>NP_001157798
          Length = 866

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 341 NCVPM 345
>NP_877497
          Length = 776

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   SNCLPM 9
           +NCLP+
Sbjct: 735 TNCLPV 740
>NP_775922
          Length = 6996

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    VSNCLPM 9
            VS CLP+
Sbjct: 6061 VSACLPL 6067
>NP_001257869
          Length = 1111

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 309 NCVPM 313
>XP_005255255
          Length = 951

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 149 NCVPM 153
>XP_005255254
          Length = 1051

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 249 NCVPM 253
>XP_005255252
          Length = 1124

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 323 NCVPM 327
>XP_005254538
          Length = 993

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   KVSNCLP 8
           KVS C+P
Sbjct: 889 KVSVCIP 895
>XP_005269612
          Length = 669

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   SNCLPM 9
           +NCLP+
Sbjct: 628 TNCLPV 633
>XP_005271922
          Length = 685

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 411 NCVPM 415
>XP_005271921
          Length = 713

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 411 NCVPM 415
>XP_005271918
          Length = 878

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 338 NCVPM 342
>XP_006714588
          Length = 897

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 372 NCVPM 376
>XP_005271917
          Length = 936

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 411 NCVPM 415
>XP_005271912
          Length = 1308

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 411 NCVPM 415
>XP_005271916
          Length = 1165

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 268 NCVPM 272
>XP_005271914
          Length = 1238

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 341 NCVPM 345
>XP_006714587
          Length = 1269

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 372 NCVPM 376
>XP_005271913
          Length = 1293

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NC+PM
Sbjct: 411 NCVPM 415
>XP_005263269
          Length = 596

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NCLP+
Sbjct: 151 NCLPL 155
>XP_005263268
          Length = 599

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NCLP+
Sbjct: 151 NCLPL 155
>XP_005247496
          Length = 337

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  AKVSNCL 7
          AKVS CL
Sbjct: 49 AKVSPCL 55
>XP_005247494
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   AKVSNCL 7
           AKVS CL
Sbjct: 250 AKVSPCL 256
>XP_006712659
          Length = 747

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 653 MANCLP 658
>XP_005246706
          Length = 891

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 797 MANCLP 802
>XP_005246704
          Length = 932

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VSNCLP 8
           ++NCLP
Sbjct: 838 MANCLP 843
>XP_005264434
          Length = 843

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   AKVSNC 6
           +K+SNC
Sbjct: 657 SKISNC 662
>XP_005264433
          Length = 899

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   AKVSNC 6
           +K+SNC
Sbjct: 713 SKISNC 718
>XP_005264432
          Length = 899

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   AKVSNC 6
           +K+SNC
Sbjct: 713 SKISNC 718
>XP_005264431
          Length = 928

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   AKVSNC 6
           +K+SNC
Sbjct: 742 SKISNC 747
>XP_005271152
          Length = 474

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NCLP+
Sbjct: 406 NCLPL 410
>XP_005271151
          Length = 474

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query: 5   NCLPM 9
           NCLP+
Sbjct: 406 NCLPL 410
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.322    0.127    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 580,233
Number of extensions: 599
Number of successful extensions: 101
Number of sequences better than 10000.0: 101
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 101
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package