Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 390 XP_005251512 20 390 NP_055289 18 1482 NP_001106819 17 4312 NP_001106820 17 4312 NP_001388 17 4312 NP_001106818 17 4312 NP_000619 17 4312 XP_006710461 17 4312 NP_006501 16 5631 NP_817089 16 5631 NP_060034 16 7355 NP_001271203 16 7355 NP_001009959 16 7355 NP_065762 16 7355 NP_877497 16 7355 NP_065867 16 7355 NP_001116291 16 7355 NP_056432 16 7355 XP_005254357 16 7355 XP_006719539 16 7355 XP_005269612 16 7355 XP_005246008 16 7355 XP_005246007 16 7355 NP_001005285 16 7355 NP_002609 15 9605 NP_056060 15 9605 NP_660325 15 9605 NP_055247 15 9605 NP_060145 15 9605 NP_073713 15 9605 NP_001265651 15 9605 NP_001165447 15 9605 NP_001265653 15 9605 NP_001265652 15 9605 NP_001093328 15 9605 NP_001193856 15 9605 XP_005249901 15 9605 XP_006715569 15 9605 XP_006715568 15 9605 XP_006715101 15 9605 XP_006715100 15 9605 XP_005249021 15 9605 XP_006715099 15 9605 XP_006715098 15 9605 XP_006715097 15 9605 XP_006715096 15 9605 XP_006715067 15 9605 XP_006714950 15 9605 XP_006714615 15 9605 XP_006714614 15 9605 XP_005271960 15 9605 XP_006714613 15 9605 XP_006714612 15 9605 XP_006714611 15 9605 XP_006714610 15 9605 XP_006714609 15 9605 XP_006714608 15 9605 XP_005271959 15 9605 XP_006714607 15 9605 XP_006714606 15 9605 XP_005270845 15 9605 NP_076959 15 9605 NP_001002907 15 9605>NP_004963 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIYNSISY 8 AIYNSISY Sbjct: 199 AIYNSISY 206>XP_005251512 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AIYNSISY 8 AIYNSISY Sbjct: 199 AIYNSISY 206>NP_055289 Length = 455 Score = 18.1 bits (35), Expect = 1482 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IYNSISYN 9 +YNS+SY+ Sbjct: 394 VYNSVSYS 401>NP_001106819 Length = 754 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIYNSISY 8 AIYN I Y Sbjct: 483 AIYNMIGY 490>NP_001106820 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIYNSISY 8 AIYN I Y Sbjct: 496 AIYNMIGY 503>NP_001388 Length = 770 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIYNSISY 8 AIYN I Y Sbjct: 499 AIYNMIGY 506>NP_001106818 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIYNSISY 8 AIYN I Y Sbjct: 487 AIYNMIGY 494>NP_000619 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IYNSISYN 9 +YNS +YN Sbjct: 148 VYNSWTYN 155>XP_006710461 Length = 753 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 AIYNSISY 8 AIYN I Y Sbjct: 482 AIYNMIGY 489>NP_006501 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 AIYNSI+ Sbjct: 210 AIYNSIN 216>NP_817089 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IYNSISYN 9 ++N++SYN Sbjct: 78 LFNNMSYN 85>NP_060034 Length = 2551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 AIYNSISY 8 A YN +SY Sbjct: 2228 ATYNQLSY 2235>NP_001271203 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YNSI+ Sbjct: 516 AVYNSIT 522>NP_001009959 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YNSISY 8 YN+ISY Sbjct: 271 YNTISY 276>NP_065762 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YNSISY 8 YN+ISY Sbjct: 258 YNTISY 263>NP_877497 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YNSI+ Sbjct: 512 AVYNSIT 518>NP_065867 Length = 1029 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYNSISY 8 IYN I+Y Sbjct: 67 IYNEIAY 73>NP_001116291 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYNSISY 8 IYN I+Y Sbjct: 67 IYNEIAY 73>NP_056432 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YNSISY 8 YN+ISY Sbjct: 76 YNTISY 81>XP_005254357 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YNSISY 8 YN+ISY Sbjct: 76 YNTISY 81>XP_006719539 Length = 2246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 AIYNSISY 8 A YN +SY Sbjct: 2228 ATYNQLSY 2235>XP_005269612 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YNSI+ Sbjct: 405 AVYNSIT 411>XP_005246008 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYNSISY 8 IYN I+Y Sbjct: 67 IYNEIAY 73>XP_005246007 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYNSISY 8 IYN I+Y Sbjct: 67 IYNEIAY 73>NP_001005285 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YNSISY 8 YNSI+Y Sbjct: 173 YNSIAY 178>NP_002609 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 5/7 (71%) Query: 3 YNSISYN 9 YN + YN Sbjct: 100 YNGLGYN 106>NP_056060 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 363 ALYNAIS 369>NP_660325 Length = 157 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>NP_055247 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYNSISYN 9 IY+++ YN Sbjct: 175 IYSNLKYN 182>NP_060145 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IYNSISYN 9 I+N SYN Sbjct: 694 IFNQSSYN 701>NP_073713 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YNS++ Sbjct: 74 AVYNSVA 80>NP_001265651 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYNSISYN 9 IY+++ YN Sbjct: 126 IYSNLKYN 133>NP_001165447 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IYNSISYN 9 I+N SYN Sbjct: 694 IFNQSSYN 701>NP_001265653 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYNSISYN 9 IY+++ YN Sbjct: 42 IYSNLKYN 49>NP_001265652 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYNSISYN 9 IY+++ YN Sbjct: 64 IYSNLKYN 71>NP_001093328 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AIYNSIS 7 A YNS+S Sbjct: 226 AFYNSVS 232>NP_001193856 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 YNSISY 8 YN ISY Sbjct: 771 YNKISY 776>XP_005249901 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AIYNSIS 7 A YNS+S Sbjct: 168 AFYNSVS 174>XP_006715569 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYNSISYN 9 IY+++ YN Sbjct: 42 IYSNLKYN 49>XP_006715568 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IYNSISYN 9 IY+++ YN Sbjct: 153 IYSNLKYN 160>XP_006715101 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 363 ALYNAIS 369>XP_006715100 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 363 ALYNAIS 369>XP_005249021 Length = 1155 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 384 ALYNAIS 390>XP_006715099 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 384 ALYNAIS 390>XP_006715098 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 384 ALYNAIS 390>XP_006715097 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 384 ALYNAIS 390>XP_006715096 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIYNSIS 7 A+YN+IS Sbjct: 384 ALYNAIS 390>XP_006715067 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 YNSISY 8 YN ISY Sbjct: 771 YNKISY 776>XP_006714950 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IYNSISYN 9 I+N SYN Sbjct: 694 IFNQSSYN 701>XP_006714615 Length = 158 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714614 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_005271960 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714613 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714612 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714611 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714610 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714609 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714608 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_005271959 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714607 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_006714606 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 AIYNSISY 8 A+YNS+ + Sbjct: 70 AVYNSVVF 77>XP_005270845 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IYNSIS 7 IYNS+S Sbjct: 167 IYNSVS 172>NP_076959 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AIYNSIS 7 A YNS+S Sbjct: 168 AFYNSVS 174>NP_001002907 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NSISYN 9 N+ISYN Sbjct: 96 NTISYN 101Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.125 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,670 Number of extensions: 1150 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |