Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_001013757 17 3301 NP_000013 17 4312 XP_005260293 17 4312 XP_006723742 17 4312 NP_004993 16 5631 NP_003256 16 7355 NP_036565 16 7355 NP_872420 16 7355 NP_057480 16 7355 XP_005254498 16 7355 XP_006720628 16 7355 XP_006720049 16 7355 XP_005272472 16 7355 XP_006720048 16 7355 XP_005272471 16 7355 XP_006720047 16 7355 XP_006720046 16 7355 XP_005272470 16 7355 XP_006720045 16 7355 XP_006715752 16 7355 XP_006714357 16 7355 XP_005246485 16 7355 NP_001347 15 9605 NP_001180346 15 9605 NP_001180345 15 9605 NP_001171864 15 9605 NP_053586 15 9605 NP_053584 15 9605 NP_004874 15 9605 NP_053585 15 9605 NP_699204 15 9605 NP_056009 15 9605 NP_001265275 15 9605 NP_001273384 15 9605 NP_068764 15 9605 XP_005258921 15 9605 XP_006723252 15 9605 XP_006715228 15 9605 XP_005249342 15 9605 XP_005266059 15 9605 XP_006714988 15 9605 XP_006714987 15 9605 XP_006714873 15 9605 XP_006714872 15 9605 XP_006714871 15 9605 NP_056297 15 9605 NP_001073925 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 AILNV+GKD Sbjct: 1059 AILNVMGKD 1067>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 AILNV+GKD Sbjct: 711 AILNVMGKD 719>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 AILNV+GKD Sbjct: 1053 AILNVMGKD 1061>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 AILNV+GKD Sbjct: 1059 AILNVMGKD 1067>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 AILNV+GKD Sbjct: 1059 AILNVMGKD 1067>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 AILNV+GKD Sbjct: 1059 AILNVMGKD 1067>NP_001013757 Length = 432 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AILNVIGKD 9 AI N+IG+D Sbjct: 271 AIENIIGRD 279>NP_000013 Length = 363 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILNVIGKD 9 +LNVIG D Sbjct: 46 LLNVIGMD 53>XP_005260293 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILNVIGKD 9 +LNVIG D Sbjct: 46 LLNVIGMD 53>XP_006723742 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILNVIGKD 9 +LNVIG D Sbjct: 46 LLNVIGMD 53>NP_004993 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILNVIGKD 9 ++N+IG+D Sbjct: 126 VINLIGRD 133>NP_003256 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LNVIGKD 9 LNV+G D Sbjct: 286 LNVVGND 292>NP_036565 Length = 1304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 AI+NVIG Sbjct: 999 AIVNVIG 1005>NP_872420 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 200 AVLNVLG 206>NP_057480 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LNVIGKD 9 LN++G+D Sbjct: 390 LNILGRD 396>XP_005254498 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LNVIGKD 9 LN++G+D Sbjct: 390 LNILGRD 396>XP_006720628 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LNVIGKD 9 LN++G+D Sbjct: 390 LNILGRD 396>XP_006720049 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 111 AVLNVLG 117>XP_005272472 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 111 AVLNVLG 117>XP_006720048 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 233 AVLNVLG 239>XP_005272471 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 202 AVLNVLG 208>XP_006720047 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 203 AVLNVLG 209>XP_006720046 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 205 AVLNVLG 211>XP_005272470 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 231 AVLNVLG 237>XP_006720045 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 A+LNV+G Sbjct: 233 AVLNVLG 239>XP_006715752 Length = 1225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILNVIGKD 9 +LN IGK+ Sbjct: 592 LLNTIGKE 599>XP_006714357 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LNVIGKD 9 LNV+G D Sbjct: 286 LNVVGND 292>XP_005246485 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AILNVIG 7 AI+NVIG Sbjct: 853 AIVNVIG 859>NP_001347 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ILNVIGKD 9 +LN GKD Sbjct: 434 LLNATGKD 441>NP_001180346 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ILNVIGKD 9 +LN GKD Sbjct: 418 LLNATGKD 425>NP_001180345 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ILNVIGKD 9 +LN GKD Sbjct: 434 LLNATGKD 441>NP_001171864 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 315 NILGKD 320>NP_053586 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 315 NILGKD 320>NP_053584 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 315 NILGKD 320>NP_004874 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 315 NILGKD 320>NP_053585 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 315 NILGKD 320>NP_699204 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AILNVIGKD 9 A+LNV+ K+ Sbjct: 322 AVLNVLEKE 330>NP_056009 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ILNVIGKD 9 +LN+ G+D Sbjct: 54 LLNIYGRD 61>NP_001265275 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AILNVIGKD 9 A+LNV+ K+ Sbjct: 281 AVLNVLEKE 289>NP_001273384 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILNVIGK 8 +LN+IGK Sbjct: 232 LLNLIGK 238>NP_068764 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILNVIGK 8 +LN+IGK Sbjct: 232 LLNLIGK 238>XP_005258921 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 +I+N++GK+ Sbjct: 129 SIVNLLGKE 137>XP_006723252 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 +I+N++GK+ Sbjct: 129 SIVNLLGKE 137>XP_006715228 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILNVIGK 8 +LN+IGK Sbjct: 216 LLNLIGK 222>XP_005249342 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILNVIGK 8 +LN+IGK Sbjct: 513 LLNLIGK 519>XP_005266059 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AILNVIGKD 9 A+LNV+ K+ Sbjct: 124 AVLNVLEKE 132>XP_006714988 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AILNVIGKD 9 A+LNV+ K+ Sbjct: 280 AVLNVLEKE 288>XP_006714987 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AILNVIGKD 9 A+LNV+ K+ Sbjct: 281 AVLNVLEKE 289>XP_006714873 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 315 NILGKD 320>XP_006714872 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 315 NILGKD 320>XP_006714871 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVIGKD 9 N++GKD Sbjct: 112 NILGKD 117>NP_056297 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILNVIGK 8 +LN+IGK Sbjct: 513 LLNLIGK 519>NP_001073925 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 AILNVIGKD 9 +I+N++GK+ Sbjct: 129 SIVNLLGKE 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.147 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,838 Number of extensions: 901 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |