Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 18 1135 NP_004439 18 1135 NP_001276865 18 1135 NP_001005862 18 1135 XP_005257197 18 1135 XP_006721828 18 1135 XP_005245315 17 3301 XP_006711447 17 3301 XP_005245314 17 3301 NP_002637 17 3301 NP_001273538 17 4312 NP_115507 17 4312 XP_006715637 17 4312 XP_005267214 17 4312 XP_005267213 17 4312 XP_006715636 17 4312 XP_005267212 17 4312 XP_005267211 17 4312 NP_870987 16 5631 XP_006716781 16 5631 XP_005251409 16 5631 XP_005251408 16 5631 XP_006716780 16 5631 NP_060542 16 7355 NP_149121 16 7355 NP_001164632 16 7355 NP_001164630 16 7355 NP_001164629 16 7355 NP_001164628 16 7355 NP_001164627 16 7355 XP_005259426 16 7355 XP_005259424 16 7355 XP_005259423 16 7355 NP_057460 15 9605 NP_001265393 15 9605 NP_036192 15 9605 NP_005681 15 9605 NP_036193 15 9605 NP_001265392 15 9605 NP_001265394 15 9605 NP_001244928 15 9605 NP_036442 15 9605 NP_001138600 15 9605 XP_006721607 15 9605 XP_005256736 15 9605 XP_005253340 15 9605 XP_005253339 15 9605 XP_006715439 15 9605 NP_001092763 15 9605>NP_001276866 Length = 1055 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKVSRENT 9 AIKV RENT Sbjct: 751 AIKVLRENT 759>NP_004439 Length = 1255 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKVSRENT 9 AIKV RENT Sbjct: 751 AIKVLRENT 759>NP_001276865 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKVSRENT 9 AIKV RENT Sbjct: 736 AIKVLRENT 744>NP_001005862 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKVSRENT 9 AIKV RENT Sbjct: 721 AIKVLRENT 729>XP_005257197 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKVSRENT 9 AIKV RENT Sbjct: 721 AIKVLRENT 729>XP_006721828 Length = 1336 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIKVSRENT 9 AIKV RENT Sbjct: 832 AIKVLRENT 840>XP_005245315 Length = 1607 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 +KV RENT Sbjct: 1362 VKVMRENT 1369>XP_006711447 Length = 1634 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 +KV RENT Sbjct: 1389 VKVMRENT 1396>XP_005245314 Length = 1634 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 +KV RENT Sbjct: 1389 VKVMRENT 1396>NP_002637 Length = 1634 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 +KV RENT Sbjct: 1389 VKVMRENT 1396>NP_001273538 Length = 702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 176 ALKVSRKN 183>NP_115507 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 341 ALKVSRKN 348>XP_006715637 Length = 702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 176 ALKVSRKN 183>XP_005267214 Length = 702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 176 ALKVSRKN 183>XP_005267213 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 341 ALKVSRKN 348>XP_006715636 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 341 ALKVSRKN 348>XP_005267212 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 341 ALKVSRKN 348>XP_005267211 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIKVSREN 8 A+KVSR+N Sbjct: 341 ALKVSRKN 348>NP_870987 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSRENT 9 K+S+ENT Sbjct: 454 KISKENT 460>XP_006716781 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSRENT 9 K+S+ENT Sbjct: 280 KISKENT 286>XP_005251409 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSRENT 9 K+S+ENT Sbjct: 454 KISKENT 460>XP_005251408 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSRENT 9 K+S+ENT Sbjct: 454 KISKENT 460>XP_006716780 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSRENT 9 K+S+ENT Sbjct: 454 KISKENT 460>NP_060542 Length = 2144 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIKVSRENT 9 ++KV+ ENT Sbjct: 269 SVKVTMENT 277>NP_149121 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 243 ISISRDNT 250>NP_001164632 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 185 ISISRDNT 192>NP_001164630 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 185 ISISRDNT 192>NP_001164629 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 195 ISISRDNT 202>NP_001164628 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 243 ISISRDNT 250>NP_001164627 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 185 ISISRDNT 192>XP_005259426 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 243 ISISRDNT 250>XP_005259424 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 185 ISISRDNT 192>XP_005259423 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IKVSRENT 9 I +SR+NT Sbjct: 243 ISISRDNT 250>NP_057460 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIKVSREN 8 AIKV RE+ Sbjct: 225 AIKVERED 232>NP_001265393 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 209 ALKISRE 215>NP_036192 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 196 ALKISRE 202>NP_005681 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 196 ALKISRE 202>NP_036193 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 196 ALKISRE 202>NP_001265392 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 196 ALKISRE 202>NP_001265394 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 209 ALKISRE 215>NP_001244928 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIKVSREN 8 AIKV RE+ Sbjct: 267 AIKVERED 274>NP_036442 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKVSREN 8 +KVSR+N Sbjct: 1076 VKVSRKN 1082>NP_001138600 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IKVSRENT 9 +KV ENT Sbjct: 1065 VKVEEENT 1072>XP_006721607 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIKVSREN 8 AIKV RE+ Sbjct: 225 AIKVERED 232>XP_005256736 Length = 1169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AIKVSREN 8 AIKV RE+ Sbjct: 225 AIKVERED 232>XP_005253340 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 47 ALKISRE 53>XP_005253339 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIKVSRE 7 A+K+SRE Sbjct: 209 ALKISRE 215>XP_006715439 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IKVSRENT 9 +KV ENT Sbjct: 1065 VKVEEENT 1072>NP_001092763 Length = 1234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKVSREN 8 +KVSR+N Sbjct: 1078 VKVSRKN 1084Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.114 0.265 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,694 Number of extensions: 638 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |