Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_899243 17 4312 NP_001034842 17 4312 XP_006720135 17 4312 XP_006720134 17 4312 XP_006720133 17 4312 XP_006712080 17 4312 XP_006712079 17 4312 NP_001254651 16 7355 NP_008878 16 7355 NP_849172 16 7355 NP_060564 16 7355 NP_001123479 16 7355 NP_001123478 16 7355 NP_002085 16 7355 NP_002878 16 7355 XP_005255332 16 7355 XP_005255331 16 7355 XP_005266014 16 7355 XP_005265822 16 7355 NP_001243034 15 9605 NP_003383 15 9605 NP_219482 15 9605 NP_001159450 15 9605 NP_653308 15 9605 NP_001159449 15 9605 NP_001161880 15 9605 NP_001161879 15 9605 NP_055804 15 9605 NP_001161881 15 9605 NP_001161882 15 9605 NP_001161883 15 9605 NP_037534 15 9605 NP_001192246 15 9605 NP_056107 15 9605 NP_001171725 15 9605 XP_006715455 15 9605 XP_006715453 15 9605 XP_005248748 15 9605 XP_005248747 15 9605 XP_006715452 15 9605 XP_006715451 15 9605 XP_006715450 15 9605 XP_005248745 15 9605 XP_005248744 15 9605 XP_005248743 15 9605 XP_005248742 15 9605 XP_006715449 15 9605 XP_006715448 15 9605 XP_006715447 15 9605 XP_006715446 15 9605 XP_006713387 15 9605 XP_005263937 15 9605 XP_005263936 15 9605 XP_005245313 15 9605 NP_892015 15 9605 NP_055562 15 9605 NP_055770 15 9605 NP_057019 15 9605 NP_001004758 15 9605>NP_899243 Length = 1977 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+LQVN Sbjct: 1137 GKLLQVN 1143>NP_001034842 Length = 1958 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+LQVN Sbjct: 1137 GKLLQVN 1143>XP_006720135 Length = 1454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+LQVN Sbjct: 1137 GKLLQVN 1143>XP_006720134 Length = 1579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+LQVN Sbjct: 1137 GKLLQVN 1143>XP_006720133 Length = 1969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+LQVN Sbjct: 1137 GKLLQVN 1143>XP_006712080 Length = 924 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+LQVN Sbjct: 103 GKLLQVN 109>XP_006712079 Length = 1683 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+LQVN Sbjct: 895 GKLLQVN 901>NP_001254651 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IGKVLQVN 9 + K+LQ+N Sbjct: 34 VNKILQIN 41>NP_008878 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IGKVLQVN 9 + K+LQ+N Sbjct: 34 VNKILQIN 41>NP_849172 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AIGKVLQVN 9 A+G+ LQ+N Sbjct: 909 ALGQALQLN 917>NP_060564 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIGKVLQV 8 AIGKVL++ Sbjct: 616 AIGKVLKL 623>NP_001123479 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIGKVLQV 8 AIGKVL++ Sbjct: 487 AIGKVLKL 494>NP_001123478 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIGKVLQV 8 AIGKVL++ Sbjct: 624 AIGKVLKL 631>NP_002085 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIGKVLQV 8 AIGKVL++ Sbjct: 625 AIGKVLKL 632>NP_002878 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+L+VN Sbjct: 625 GKILKVN 631>XP_005255332 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIGKVLQV 8 AIGKVL++ Sbjct: 517 AIGKVLKL 524>XP_005255331 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AIGKVLQV 8 AIGKVL++ Sbjct: 518 AIGKVLKL 525>XP_005266014 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK+L+VN Sbjct: 419 GKILKVN 425>XP_005265822 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IGKVLQVN 9 + K+LQ+N Sbjct: 149 VNKILQIN 156>NP_001243034 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK++QVN Sbjct: 267 GKLVQVN 273>NP_003383 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK++QVN Sbjct: 282 GKLVQVN 288>NP_219482 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AIGKVLQ 7 A+G+VLQ Sbjct: 418 AVGRVLQ 424>NP_001159450 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIGKVLQVN 9 ++G+VLQV+ Sbjct: 254 SLGQVLQVS 262>NP_653308 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIGKVLQVN 9 ++G+VLQV+ Sbjct: 254 SLGQVLQVS 262>NP_001159449 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIGKVLQVN 9 ++G+VLQV+ Sbjct: 254 SLGQVLQVS 262>NP_001161880 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 741 GKVLQV 746>NP_001161879 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 936 GKVLQV 941>NP_055804 Length = 1692 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1616 GKVLQV 1621>NP_001161881 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 684 GKVLQV 689>NP_001161882 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 750 GKVLQV 755>NP_001161883 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 143 GKVLQV 148>NP_037534 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AIGKVLQV 8 A+GK+L V Sbjct: 297 ALGKILSV 304>NP_001192246 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 194 GKVLQV 199>NP_056107 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGKVLQVN 9 +GKVLQ + Sbjct: 420 VGKVLQAS 427>NP_001171725 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGKVLQVN 9 +GKVLQ + Sbjct: 420 VGKVLQAS 427>XP_006715455 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 398 GKVLQV 403>XP_006715453 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1261 GKVLQV 1266>XP_005248748 Length = 1343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1267 GKVLQV 1272>XP_005248747 Length = 1367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1291 GKVLQV 1296>XP_006715452 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1398 GKVLQV 1403>XP_006715451 Length = 1475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1399 GKVLQV 1404>XP_006715450 Length = 1498 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1422 GKVLQV 1427>XP_005248745 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1439 GKVLQV 1444>XP_005248744 Length = 1519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1443 GKVLQV 1448>XP_005248743 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1449 GKVLQV 1454>XP_005248742 Length = 1535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1459 GKVLQV 1464>XP_006715449 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1463 GKVLQV 1468>XP_006715448 Length = 1549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1473 GKVLQV 1478>XP_006715447 Length = 1574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1498 GKVLQV 1503>XP_006715446 Length = 1574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 1498 GKVLQV 1503>XP_006713387 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVLQVN 9 GK++QVN Sbjct: 267 GKLVQVN 273>XP_005263937 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIGKVLQVN 9 ++G+VLQV+ Sbjct: 178 SLGQVLQVS 186>XP_005263936 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AIGKVLQVN 9 ++G+VLQV+ Sbjct: 254 SLGQVLQVS 262>XP_005245313 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGKVLQV 8 +G+VLQV Sbjct: 146 VGRVLQV 152>NP_892015 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 193 GKVLQV 198>NP_055562 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKVLQV 8 GKVLQV Sbjct: 234 GKVLQV 239>NP_055770 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGKVLQV 8 +G+VLQV Sbjct: 60 VGRVLQV 66>NP_057019 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGKVLQV 8 +G+VLQV Sbjct: 146 VGRVLQV 152>NP_001004758 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IGKVLQ 7 IGKVLQ Sbjct: 228 IGKVLQ 233Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.138 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,723 Number of extensions: 560 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |