Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003963 17 2528 XP_005270323 17 2528 XP_005270322 17 2528 NP_004351 17 3301 NP_036222 16 5631 XP_006710603 16 5631 XP_006710602 16 5631 XP_006710600 16 5631 XP_005270757 16 5631 XP_006710599 16 5631 XP_006710598 16 5631 XP_006710597 16 5631 XP_006710596 16 5631 XP_006710595 16 5631 XP_006710594 16 5631 XP_006710593 16 5631 XP_006710592 16 5631 XP_006710591 16 5631 XP_006710590 16 5631 XP_006710589 16 5631 XP_006710588 16 5631 XP_006710587 16 5631 XP_006710586 16 5631 XP_006710585 16 5631 XP_005270755 16 5631 XP_006710584 16 5631 XP_005270754 16 5631 XP_005270753 16 5631 XP_006710583 16 5631 XP_005270752 16 5631 XP_006710582 16 5631 XP_005270751 16 5631 NP_004221 15 9605 XP_006722999 15 9605>NP_003963 Length = 1849 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IANTILSQ 9 IANT++SQ Sbjct: 1774 IANTVISQ 1781>XP_005270323 Length = 1519 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IANTILSQ 9 IANT++SQ Sbjct: 1444 IANTVISQ 1451>XP_005270322 Length = 1646 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IANTILSQ 9 IANT++SQ Sbjct: 1571 IANTVISQ 1578>NP_004351 Length = 882 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AIANTILSQ 9 AIA TILSQ Sbjct: 299 AIAYTILSQ 307>NP_036222 Length = 5430 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 4516 ILNTVLSQ 4523>XP_006710603 Length = 5324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 4404 ILNTVLSQ 4411>XP_006710602 Length = 7391 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6471 ILNTVLSQ 6478>XP_006710600 Length = 5384 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 4404 ILNTVLSQ 4411>XP_005270757 Length = 5460 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 4546 ILNTVLSQ 4553>XP_006710599 Length = 5656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 4676 ILNTVLSQ 4683>XP_006710598 Length = 7553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6573 ILNTVLSQ 6580>XP_006710597 Length = 7451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6471 ILNTVLSQ 6478>XP_006710596 Length = 7512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6532 ILNTVLSQ 6539>XP_006710595 Length = 7526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6546 ILNTVLSQ 6553>XP_006710594 Length = 7528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6548 ILNTVLSQ 6555>XP_006710593 Length = 7539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6559 ILNTVLSQ 6566>XP_006710592 Length = 7544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6564 ILNTVLSQ 6571>XP_006710591 Length = 7558 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6578 ILNTVLSQ 6585>XP_006710590 Length = 7563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6583 ILNTVLSQ 6590>XP_006710589 Length = 7595 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6615 ILNTVLSQ 6622>XP_006710588 Length = 7614 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6634 ILNTVLSQ 6641>XP_006710587 Length = 7645 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6665 ILNTVLSQ 6672>XP_006710586 Length = 7645 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>XP_006710585 Length = 7657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>XP_005270755 Length = 7663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>XP_006710584 Length = 7686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>XP_005270754 Length = 7694 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>XP_005270753 Length = 7700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>XP_006710583 Length = 7702 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6722 ILNTVLSQ 6729>XP_005270752 Length = 7717 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>XP_006710582 Length = 7720 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6740 ILNTVLSQ 6747>XP_005270751 Length = 7723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IANTILSQ 9 I NT+LSQ Sbjct: 6743 ILNTVLSQ 6750>NP_004221 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IANTILS 8 +ANT+LS Sbjct: 87 VANTLLS 93>XP_006722999 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IANTILS 8 +ANT+LS Sbjct: 87 VANTLLS 93Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.120 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 251,975 Number of extensions: 321 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |