Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 18 1135 NP_001091680 18 1135 NP_001091679 18 1135 XP_006713048 18 1135 XP_005264943 18 1135 XP_005258069 16 5631 NP_001264352 16 7355 NP_510880 16 7355 NP_976063 16 7355 NP_056508 16 7355 XP_006724786 16 7355 XP_006713047 16 7355 XP_006713046 16 7355 XP_006710322 16 7355 NP_742093 15 9605 NP_001269238 15 9605 NP_001269239 15 9605 NP_473361 15 9605 NP_695000 15 9605 NP_079375 15 9605 NP_001172035 15 9605 NP_001273191 15 9605 NP_660288 15 9605 NP_689985 15 9605 NP_005656 15 9605 NP_001153416 15 9605 XP_005272515 15 9605 XP_006721642 15 9605 XP_006721641 15 9605 XP_005268826 15 9605 XP_006719386 15 9605 XP_005268825 15 9605 XP_005268823 15 9605 XP_005268824 15 9605 XP_006710953 15 9605 XP_005271239 15 9605 XP_006710952 15 9605 XP_006710951 15 9605 XP_006710950 15 9605 XP_006710949 15 9605 XP_006710948 15 9605 XP_006710947 15 9605 XP_005271237 15 9605 XP_005271236 15 9605>NP_001895 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLMELDMA 9 A LMELDMA Sbjct: 5 ADLMELDMA 13>NP_001091680 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLMELDMA 9 A LMELDMA Sbjct: 5 ADLMELDMA 13>NP_001091679 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLMELDMA 9 A LMELDMA Sbjct: 5 ADLMELDMA 13>XP_006713048 Length = 720 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLMELDMA 9 A LMELDMA Sbjct: 5 ADLMELDMA 13>XP_005264943 Length = 781 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLMELDMA 9 A LMELDMA Sbjct: 5 ADLMELDMA 13>XP_005258069 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 AGLMELDMA 9 +GL++LD+A Sbjct: 38 SGLLKLDLA 46>NP_001264352 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLMELDM 8 GLM++DM Sbjct: 103 GLMKMDM 109>NP_510880 Length = 2054 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGLMELDM 8 AGL++LD+ Sbjct: 1082 AGLLQLDV 1089>NP_976063 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AGLMELDM 8 AGL++LD+ Sbjct: 1082 AGLLQLDV 1089>NP_056508 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MELDMA 9 MELDMA Sbjct: 484 MELDMA 489>XP_006724786 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLMELDM 8 GLM++DM Sbjct: 198 GLMKMDM 204>XP_006713047 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MELDMA 9 MELDMA Sbjct: 1 MELDMA 6>XP_006713046 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MELDMA 9 MELDMA Sbjct: 1 MELDMA 6>XP_006710322 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLMELDM 8 GLM++DM Sbjct: 267 GLMKMDM 273>NP_742093 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GLMELD 7 GLME+D Sbjct: 480 GLMEMD 485>NP_001269238 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GLMELD 7 GLME+D Sbjct: 478 GLMEMD 483>NP_001269239 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GLMELD 7 GLME+D Sbjct: 484 GLMEMD 489>NP_473361 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GLMELD 7 GLME+D Sbjct: 478 GLMEMD 483>NP_695000 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GLMELD 7 GLME+D Sbjct: 142 GLMEID 147>NP_079375 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AGLMELD 7 AGL ELD Sbjct: 370 AGLYELD 376>NP_001172035 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GLMELD 7 GLME+D Sbjct: 142 GLMEID 147>NP_001273191 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMELDMA 9 LM++DMA Sbjct: 220 LMQMDMA 226>NP_660288 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 317 AELMQLDM 324>NP_689985 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMELDMA 9 LM++DMA Sbjct: 220 LMQMDMA 226>NP_005656 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 365 AELMQLDM 372>NP_001153416 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 317 AELMQLDM 324>XP_005272515 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 317 AELMQLDM 324>XP_006721642 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AGLMELD 7 AGL ELD Sbjct: 370 AGLYELD 376>XP_006721641 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AGLMELD 7 AGL ELD Sbjct: 370 AGLYELD 376>XP_005268826 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMELDMA 9 LM++DMA Sbjct: 155 LMQMDMA 161>XP_006719386 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMELDMA 9 LM++DMA Sbjct: 220 LMQMDMA 226>XP_005268825 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMELDMA 9 LM++DMA Sbjct: 220 LMQMDMA 226>XP_005268823 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMELDMA 9 LM++DMA Sbjct: 220 LMQMDMA 226>XP_005268824 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMELDMA 9 LM++DMA Sbjct: 220 LMQMDMA 226>XP_006710953 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 184 AELMQLDM 191>XP_005271239 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 276 AELMQLDM 283>XP_006710952 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 362 AELMQLDM 369>XP_006710951 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 362 AELMQLDM 369>XP_006710950 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 362 AELMQLDM 369>XP_006710949 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 362 AELMQLDM 369>XP_006710948 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 362 AELMQLDM 369>XP_006710947 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 362 AELMQLDM 369>XP_005271237 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 321 AELMQLDM 328>XP_005271236 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGLMELDM 8 A LM+LDM Sbjct: 362 AELMQLDM 369Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.134 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,837 Number of extensions: 786 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |