Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1482 NP_001185763 18 1482 NP_055459 18 1482 XP_006726410 18 1482 XP_006711719 18 1482 XP_006711718 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711712 18 1482 XP_006711711 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 XP_005277503 18 1482 XP_005273038 18 1482 XP_006711708 18 1482 XP_005277500 18 1482 XP_006711707 18 1482 XP_005277499 18 1482 XP_006711706 18 1482 XP_006711705 18 1482 XP_006711164 18 1482 XP_006710143 18 1482 XP_006710142 18 1482 XP_006710141 18 1482 XP_006725507 16 5631 XP_003960032 16 5631 NP_001185771 16 7355 XP_005255567 16 7355 XP_005255566 16 7355 NP_006422 16 7355 NP_078934 15 9605>NP_001185761 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1516 AGLEPLALR 1524>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1560 AGLEPLALR 1568>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1560 AGLEPLALR 1568>XP_006726410 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1363 AGLEPLALR 1371>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1516 AGLEPLALR 1524>XP_006711718 Length = 1436 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 567 AGLEPLALR 575>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1516 AGLEPLALR 1524>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1625 AGLEPLALR 1633>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1559 AGLEPLALR 1567>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1560 AGLEPLALR 1568>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1563 AGLEPLALR 1571>XP_006711712 Length = 2473 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_006711711 Length = 2482 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1613 AGLEPLALR 1621>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1625 AGLEPLALR 1633>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1626 AGLEPLALR 1634>XP_005277503 Length = 2498 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_005273038 Length = 2509 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_006711708 Length = 2512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_005277500 Length = 2525 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_006711707 Length = 2553 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_005277499 Length = 2561 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_006711706 Length = 2591 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1722 AGLEPLALR 1730>XP_006711705 Length = 2592 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1723 AGLEPLALR 1731>XP_006711164 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 1363 AGLEPLALR 1371>XP_006710143 Length = 562 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 402 AGLEPLALR 410>XP_006710142 Length = 671 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 511 AGLEPLALR 519>XP_006710141 Length = 672 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGLEQLALR 9 AGLE LALR Sbjct: 512 AGLEPLALR 520>XP_006725507 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLEQLALR 9 GL+Q+A+R Sbjct: 3 GLDQMAIR 10>XP_003960032 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLEQLALR 9 GL+Q+A+R Sbjct: 3 GLDQMAIR 10>NP_001185771 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AGLEQLAL 8 AG+E+LAL Sbjct: 271 AGVERLAL 278>XP_005255567 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AGLEQLA 7 AGLEQL+ Sbjct: 152 AGLEQLS 158>XP_005255566 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AGLEQLA 7 AGLEQL+ Sbjct: 153 AGLEQLS 159>NP_006422 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AGLEQLAL 8 AG+E+LAL Sbjct: 318 AGVERLAL 325>NP_078934 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AGLEQL 6 AGLEQL Sbjct: 4 AGLEQL 9Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.138 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,893 Number of extensions: 539 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |