Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_775771 21 229 NP_115927 21 229 XP_006720466 21 229 XP_005254230 21 229 XP_006720465 21 229 XP_005254228 21 229 XP_006715292 21 229 XP_005250261 17 3301 XP_005250260 17 3301 NP_690852 17 3301 NP_001108091 17 4312 NP_001108092 17 4312 NP_001108090 17 4312 NP_002397 17 4312 NP_001108089 17 4312 XP_006714930 17 4312 XP_006714929 17 4312 XP_005265973 17 4312 XP_005265972 17 4312 NP_001273653 16 5631 NP_004268 16 5631 NP_001190981 16 5631 NP_001190980 16 5631 NP_113676 16 5631 NP_001273651 16 5631 NP_055427 16 5631 NP_001273652 16 5631 XP_005251899 16 5631 XP_006715337 16 5631 XP_005249541 16 5631 XP_005249540 16 5631 NP_001243342 15 9605 NP_001035196 15 9605 NP_061028 15 9605 NP_115745 15 9605 NP_444282 15 9605 NP_004808 15 9605 NP_001164101 15 9605 NP_963923 15 9605 NP_056493 15 9605 NP_005525 15 9605 NP_001163886 15 9605 NP_079461 15 9605 NP_060113 15 9605 NP_001154879 15 9605 XP_005261026 15 9605 XP_006722025 15 9605 XP_006722024 15 9605 XP_005257527 15 9605 XP_005257526 15 9605 XP_005257525 15 9605 XP_005257524 15 9605 XP_005257260 15 9605 XP_005257258 15 9605 XP_006721872 15 9605 XP_006721871 15 9605 XP_006721870 15 9605 XP_006721869 15 9605 XP_006719903 15 9605 XP_006719869 15 9605 XP_006719868 15 9605 XP_005266408 15 9605 XP_005266407 15 9605 XP_005266403 15 9605 XP_006719867 15 9605 XP_006719866 15 9605 XP_005266405 15 9605 XP_005266404 15 9605 XP_006719703 15 9605 XP_005254005 15 9605 XP_005273812 15 9605 XP_005252372 15 9605 XP_006717387 15 9605 XP_005252371 15 9605 XP_005252370 15 9605 XP_005252369 15 9605 XP_005252368 15 9605 XP_006710747 15 9605 NP_061953 15 9605 NP_057673 15 9605 NP_057317 15 9605 NP_001163885 15 9605 NP_001163887 15 9605>NP_775771 Length = 1244 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AGFRG VRY Sbjct: 184 AGFRGTVRY 192>NP_115927 Length = 1321 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AGFRG VRY Sbjct: 197 AGFRGTVRY 205>XP_006720466 Length = 1175 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AGFRG VRY Sbjct: 115 AGFRGTVRY 123>XP_005254230 Length = 1175 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AGFRG VRY Sbjct: 115 AGFRGTVRY 123>XP_006720465 Length = 1239 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AGFRG VRY Sbjct: 179 AGFRGTVRY 187>XP_005254228 Length = 1250 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AGFRG VRY Sbjct: 190 AGFRGTVRY 198>XP_006715292 Length = 759 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AGFRG VRY Sbjct: 184 AGFRGTVRY 192>XP_005250261 Length = 495 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 AG RG+VR Sbjct: 216 AGLRGLVR 223>XP_005250260 Length = 595 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 AG RG+VR Sbjct: 368 AGLRGLVR 375>NP_690852 Length = 647 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 AG RG+VR Sbjct: 368 AGLRGLVR 375>NP_001108091 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>NP_001108092 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>NP_001108090 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>NP_002397 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>NP_001108089 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>XP_006714930 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>XP_006714929 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>XP_005265973 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>XP_005265972 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+RG+V + Sbjct: 414 AGYRGIVTF 422>NP_001273653 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GFRGMVRY 9 GF G+V Y Sbjct: 178 GFHGLVAY 185>NP_004268 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 A +RGMVR Sbjct: 66 APYRGMVR 73>NP_001190981 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 A +RGMVR Sbjct: 66 APYRGMVR 73>NP_001190980 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 A +RGMVR Sbjct: 66 APYRGMVR 73>NP_113676 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 AGFRGMVRY 9 AG+R ++RY Sbjct: 239 AGYRVLLRY 247>NP_001273651 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GFRGMVRY 9 GF G+V Y Sbjct: 178 GFHGLVAY 185>NP_055427 Length = 1118 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GFRGMVRY 9 GF G+V Y Sbjct: 178 GFHGLVAY 185>NP_001273652 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GFRGMVRY 9 GF G+V Y Sbjct: 178 GFHGLVAY 185>XP_005251899 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GFRGMVRY 9 GF G+V Y Sbjct: 178 GFHGLVAY 185>XP_006715337 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 A +RGMVR Sbjct: 66 APYRGMVR 73>XP_005249541 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 A +RGMVR Sbjct: 18 APYRGMVR 25>XP_005249540 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AGFRGMVR 8 A +RGMVR Sbjct: 66 APYRGMVR 73>NP_001243342 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRGM+R Sbjct: 68 FRGMLR 73>NP_001035196 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRGM+R Sbjct: 88 FRGMLR 93>NP_061028 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFRGMVR 8 G RGM+R Sbjct: 2 GIRGMLR 8>NP_115745 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRGM+R Sbjct: 88 FRGMLR 93>NP_444282 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFRGMVR 8 GFR M+R Sbjct: 435 GFREMIR 441>NP_004808 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 563 FRGLVR 568>NP_001164101 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 563 FRGLVR 568>NP_963923 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 563 FRGLVR 568>NP_056493 Length = 2946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>NP_005525 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 FRGMVRY 9 +RG+++Y Sbjct: 273 YRGLIKY 279>NP_001163886 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 567 FRGLVR 572>NP_079461 Length = 1990 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 + +RG VRY Sbjct: 1703 SAYRGGVRY 1711>NP_060113 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AG+ ++RY Sbjct: 201 AGYNALLRY 209>NP_001154879 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FRGMVRY 9 FRG V Y Sbjct: 288 FRGFVNY 294>XP_005261026 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 FRGMVRY 9 +RG+++Y Sbjct: 292 YRGLIKY 298>XP_006722025 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AG+ ++RY Sbjct: 37 AGYNALLRY 45>XP_006722024 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AG+ ++RY Sbjct: 226 AGYNALLRY 234>XP_005257527 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AG+ ++RY Sbjct: 201 AGYNALLRY 209>XP_005257526 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AG+ ++RY Sbjct: 203 AGYNALLRY 211>XP_005257525 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AG+ ++RY Sbjct: 224 AGYNALLRY 232>XP_005257524 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AG+ ++RY Sbjct: 226 AGYNALLRY 234>XP_005257260 Length = 1990 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 + +RG VRY Sbjct: 1703 SAYRGGVRY 1711>XP_005257258 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 + +RG VRY Sbjct: 1713 SAYRGGVRY 1721>XP_006721872 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 + +RG VRY Sbjct: 1750 SAYRGGVRY 1758>XP_006721871 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 + +RG VRY Sbjct: 1750 SAYRGGVRY 1758>XP_006721870 Length = 2064 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 + +RG VRY Sbjct: 1777 SAYRGGVRY 1785>XP_006721869 Length = 2074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 + +RG VRY Sbjct: 1787 SAYRGGVRY 1795>XP_006719903 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FRGMVRY 9 FRG V Y Sbjct: 307 FRGFVNY 313>XP_006719869 Length = 2943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719868 Length = 2938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266408 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266407 Length = 2641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 980 GFRGM 984>XP_005266403 Length = 2941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719867 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719866 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266405 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266404 Length = 2967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 GFRGM 6 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719703 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRGM+R Sbjct: 88 FRGMLR 93>XP_005254005 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRGM+R Sbjct: 88 FRGMLR 93>XP_005273812 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFRGMVR 8 GFR M+R Sbjct: 304 GFREMIR 310>XP_005252372 Length = 1102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 622 FRGLVR 627>XP_006717387 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 561 FRGLVR 566>XP_005252371 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 567 FRGLVR 572>XP_005252370 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 622 FRGLVR 627>XP_005252369 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 586 FRGLVR 591>XP_005252368 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 622 FRGLVR 627>XP_006710747 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AGF G++ + Sbjct: 221 AGFTGLISF 229>NP_061953 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 FRGMVRY 9 FRG V Y Sbjct: 308 FRGFVNY 314>NP_057673 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 AGFRGMVRY 9 A RG +RY Sbjct: 126 AATRGFIRY 134>NP_057317 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 AGFRGMVRY 9 AGF G++ + Sbjct: 259 AGFTGLISF 267>NP_001163885 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 540 FRGLVR 545>NP_001163887 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRGMVR 8 FRG+VR Sbjct: 594 FRGLVR 599Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.155 0.502 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 500,518 Number of extensions: 986 Number of successful extensions: 83 Number of sequences better than 10000.0: 83 Number of HSP's gapped: 83 Number of HSP's successfully gapped: 83 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |