Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 19 665 NP_861969 19 665 NP_000259 19 665 NP_861968 19 665 NP_861966 19 665 NP_861970 19 665 NP_861546 19 665 NP_861967 19 665 NP_005474 17 4312 NP_002282 16 5631 NP_689647 16 5631 NP_149059 16 5631 NP_112223 16 5631 NP_001041675 16 7355 NP_055942 16 7355 NP_056073 16 7355 NP_001265132 16 7355 NP_001265131 16 7355 XP_006717082 16 7355 NP_207837 15 9605 NP_001035858 15 9605 NP_057206 15 9605 XP_005268999 15 9605 XP_006719500 15 9605 NP_620481 15 9605>NP_057502 Length = 590 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 385 AEKAQITEE 393>NP_861969 Length = 507 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 302 AEKAQITEE 310>NP_000259 Length = 595 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 385 AEKAQITEE 393>NP_861968 Length = 507 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 302 AEKAQITEE 310>NP_861966 Length = 548 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 343 AEKAQITEE 351>NP_861970 Length = 590 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 385 AEKAQITEE 393>NP_861546 Length = 590 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 385 AEKAQITEE 393>NP_861967 Length = 549 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AEKAQITKE 9 AEKAQIT+E Sbjct: 344 AEKAQITEE 352>NP_005474 Length = 956 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AEKAQITK 8 AEKA+IT+ Sbjct: 440 AEKAEITR 447>NP_002282 Length = 1786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 1602 AEKAQVAAE 1610>NP_689647 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKA TKE Sbjct: 272 AEKAASTKE 280>NP_149059 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AEKAQIT 7 AEKAQ+T Sbjct: 252 AEKAQLT 258>NP_112223 Length = 755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKAQITKE 9 EKAQ T+E Sbjct: 422 EKAQTTRE 429>NP_001041675 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 512 AEKAQLKSE 520>NP_055942 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 462 AEKAQLKSE 470>NP_056073 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EKAQITKE 9 EKA++T+E Sbjct: 637 EKAKVTEE 644>NP_001265132 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 327 AEKAQLKSE 335>NP_001265131 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 391 AEKAQLKSE 399>XP_006717082 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EKAQITKE 9 EKA++T+E Sbjct: 569 EKAKVTEE 576>NP_207837 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EKAQITKE 9 E+AQ+T E Sbjct: 946 ERAQVTPE 953>NP_001035858 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 517 AEKAQLEAE 525>NP_057206 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 517 AEKAQLEAE 525>XP_005268999 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 517 AEKAQLEAE 525>XP_006719500 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AEKAQITKE 9 AEKAQ+ E Sbjct: 517 AEKAQLEAE 525>NP_620481 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EKAQITKE 9 E+AQ+T E Sbjct: 873 ERAQVTPE 880Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.104 0.229 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 355,203 Number of extensions: 553 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |