Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 18 1482 NP_076427 17 3301 NP_001077393 17 3301 XP_005273316 17 3301 XP_006711593 17 3301 NP_006288 16 5631 NP_003165 16 7355 XP_006717559 16 7355 XP_006717558 16 7355 XP_005252626 16 7355 XP_005252623 16 7355 NP_001001412 15 9605 NP_009117 15 9605 NP_055474 15 9605 NP_001124331 15 9605 NP_001124330 15 9605 NP_001177143 15 9605 XP_005260322 15 9605 XP_005260321 15 9605 XP_005260320 15 9605 XP_006723758 15 9605 XP_006723757 15 9605 XP_006723756 15 9605 XP_006723755 15 9605 XP_006723754 15 9605 XP_006723753 15 9605 XP_005260319 15 9605 XP_006720850 15 9605 XP_006720849 15 9605 XP_005254861 15 9605 XP_006720848 15 9605 XP_005254860 15 9605 XP_006720847 15 9605 XP_006720846 15 9605 XP_005254859 15 9605 XP_006720845 15 9605 XP_005254858 15 9605>NP_005350 Length = 552 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AATAQASAA 9 AATAQA+AA Sbjct: 451 AATAQAAAA 459>NP_076427 Length = 601 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AATAQASAA 9 AA AQASAA Sbjct: 394 AAPAQASAA 402>NP_001077393 Length = 355 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AATAQASAA 9 AA AQASAA Sbjct: 148 AAPAQASAA 156>XP_005273316 Length = 355 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AATAQASAA 9 AA AQASAA Sbjct: 148 AAPAQASAA 156>XP_006711593 Length = 601 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AATAQASAA 9 AA AQASAA Sbjct: 394 AAPAQASAA 402>NP_006288 Length = 633 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AATAQASAA 9 AAT QAS+A Sbjct: 213 AATLQASSA 221>NP_003165 Length = 1788 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AATAQASA 8 AAT QASA Sbjct: 353 AATLQASA 360>XP_006717559 Length = 1866 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AATAQASA 8 AAT QASA Sbjct: 431 AATLQASA 438>XP_006717558 Length = 1908 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AATAQASA 8 AAT QASA Sbjct: 431 AATLQASA 438>XP_005252626 Length = 2260 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AATAQASA 8 AAT QASA Sbjct: 825 AATLQASA 832>XP_005252623 Length = 2302 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AATAQASA 8 AAT QASA Sbjct: 825 AATLQASA 832>NP_001001412 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 ATA ASAA Sbjct: 268 ATAPASAA 275>NP_009117 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>NP_055474 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1097 AQAQASAA 1104>NP_001124331 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1097 AQAQASAA 1104>NP_001124330 Length = 1433 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1122 AQAQASAA 1129>NP_001177143 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1055 AQAQASAA 1062>XP_005260322 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 735 ARAQASAA 742>XP_005260321 Length = 2365 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1290 ARAQASAA 1297>XP_005260320 Length = 2370 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>XP_006723758 Length = 2386 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1311 ARAQASAA 1318>XP_006723757 Length = 2404 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>XP_006723756 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>XP_006723755 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>XP_006723754 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>XP_006723753 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>XP_005260319 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1367 ARAQASAA 1374>XP_006720850 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1110 AQAQASAA 1117>XP_006720849 Length = 1366 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1055 AQAQASAA 1062>XP_005254861 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1097 AQAQASAA 1104>XP_006720848 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1116 AQAQASAA 1123>XP_005254860 Length = 1429 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1118 AQAQASAA 1125>XP_006720847 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1150 AQAQASAA 1157>XP_006720846 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1158 AQAQASAA 1165>XP_005254859 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1158 AQAQASAA 1165>XP_006720845 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1158 AQAQASAA 1165>XP_005254858 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAQASAA 9 A AQASAA Sbjct: 1158 AQAQASAA 1165Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.0805 0.165 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 132,202 Number of extensions: 246 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |