Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 390 NP_001909 18 1935 XP_005270603 18 1935 XP_005270602 18 1935 NP_001252541 17 4312 NP_057368 17 4312 NP_940931 17 4312 XP_006721943 17 4312 XP_006721942 17 4312 NP_476506 16 5631 NP_476505 16 5631 NP_004360 16 5631 NP_476508 16 5631 NP_476507 16 5631 XP_005246123 16 5631 XP_005246122 16 5631 XP_006712316 16 5631 NP_115514 16 5631 NP_690867 16 5631 NP_001185797 16 7355 NP_005177 16 7355 NP_001185798 16 7355 NP_000688 16 7355 NP_003777 16 7355 NP_057595 16 7355 NP_114416 16 7355 NP_001166245 16 7355 XP_006723108 16 7355 XP_005258618 16 7355 XP_005257820 16 7355 XP_006718761 16 7355 NP_997208 16 7355 NP_006421 15 9605 NP_001243650 15 9605 NP_861441 15 9605 NP_006057 15 9605 NP_697021 15 9605 NP_001189342 15 9605 NP_001189343 15 9605 NP_001239200 15 9605 NP_001006606 15 9605 NP_689634 15 9605 NP_001239199 15 9605 NP_001239198 15 9605 XP_006717017 15 9605 XP_005268434 15 9605 XP_006714819 15 9605>NP_004295 Length = 1620 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AALGLLQFN 9 AA+GLLQFN Sbjct: 161 AAVGLLQFN 169>NP_001909 Length = 482 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AALGLLQF 8 A+LGLLQF Sbjct: 315 ASLGLLQF 322>XP_005270603 Length = 301 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AALGLLQF 8 A+LGLLQF Sbjct: 134 ASLGLLQF 141>XP_005270602 Length = 301 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 AALGLLQF 8 A+LGLLQF Sbjct: 134 ASLGLLQF 141>NP_001252541 Length = 2371 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 AALGLLQ 7 AALGLLQ Sbjct: 1652 AALGLLQ 1658>NP_057368 Length = 2376 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 AALGLLQ 7 AALGLLQ Sbjct: 1657 AALGLLQ 1663>NP_940931 Length = 1503 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALGLLQFN 9 ALG+L FN Sbjct: 1262 ALGVLDFN 1269>XP_006721943 Length = 1456 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALGLLQFN 9 ALG+L FN Sbjct: 1262 ALGVLDFN 1269>XP_006721942 Length = 1503 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALGLLQFN 9 ALG+L FN Sbjct: 1262 ALGVLDFN 1269>NP_476506 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 248 SALGLANFN 256>NP_476505 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 47 SALGLANFN 55>NP_004360 Length = 3177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 454 SALGLANFN 462>NP_476508 Length = 2971 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 248 SALGLANFN 256>NP_476507 Length = 2570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 47 SALGLANFN 55>XP_005246123 Length = 2770 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 47 SALGLANFN 55>XP_005246122 Length = 2977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 454 SALGLANFN 462>XP_006712316 Length = 3010 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AALGLLQFN 9 +ALGL FN Sbjct: 454 SALGLANFN 462>NP_115514 Length = 684 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGLLQFN 9 LGLLQF+ Sbjct: 602 LGLLQFD 608>NP_690867 Length = 674 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGLLQFN 9 LGLLQF+ Sbjct: 602 LGLLQFD 608>NP_001185797 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGLLQFN 9 LGL++FN Sbjct: 605 LGLVEFN 611>NP_005177 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGLLQFN 9 LGL++FN Sbjct: 605 LGLVEFN 611>NP_001185798 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGLLQFN 9 LGL++FN Sbjct: 605 LGLVEFN 611>NP_000688 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGLLQF 8 LGLLQF Sbjct: 57 LGLLQF 62>NP_003777 Length = 1527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AALGLLQ 7 AALG+LQ Sbjct: 1016 AALGILQ 1022>NP_057595 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 AALGLLQF 8 AALGLL F Sbjct: 66 AALGLLFF 73>NP_114416 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALGLLQF 8 ALGLL+F Sbjct: 145 ALGLLKF 151>NP_001166245 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 A GLL FN Sbjct: 400 AFGLLPFN 407>XP_006723108 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 A GLL FN Sbjct: 204 AFGLLPFN 211>XP_005258618 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 A GLL FN Sbjct: 366 AFGLLPFN 373>XP_005257820 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AALGLLQ 7 AALG+LQ Sbjct: 952 AALGILQ 958>XP_006718761 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LGLLQFN 9 LGL++FN Sbjct: 605 LGLVEFN 611>NP_997208 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 A GLL FN Sbjct: 400 AFGLLPFN 407>NP_006421 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AALGLLQF 8 A +GL+QF Sbjct: 244 AKIGLIQF 251>NP_001243650 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AALGLLQF 8 A +GL+QF Sbjct: 214 AKIGLIQF 221>NP_861441 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AALGLLQF 8 AALG L+F Sbjct: 314 AALGYLRF 321>NP_006057 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 ALGL FN Sbjct: 158 ALGLSNFN 165>NP_697021 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 ALGL FN Sbjct: 158 ALGLSNFN 165>NP_001189342 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 ALGL FN Sbjct: 158 ALGLSNFN 165>NP_001189343 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALGLLQFN 9 ALGL FN Sbjct: 158 ALGLSNFN 165>NP_001239200 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALGLLQF 8 A+GLL+F Sbjct: 247 AIGLLEF 253>NP_001006606 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALGLLQF 8 A+GLL+F Sbjct: 272 AIGLLEF 278>NP_689634 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALGLLQF 8 A+GLL+F Sbjct: 275 AIGLLEF 281>NP_001239199 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALGLLQF 8 A+GLL+F Sbjct: 213 AIGLLEF 219>NP_001239198 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALGLLQF 8 A+GLL+F Sbjct: 227 AIGLLEF 233>XP_006717017 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALGLLQF 8 A+GLL+F Sbjct: 278 AIGLLEF 284>XP_005268434 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AALGLLQF 8 AALG L+F Sbjct: 314 AALGYLRF 321>XP_006714819 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AALGLLQF 8 AALG L+F Sbjct: 281 AALGYLRF 288Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.145 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 466,190 Number of extensions: 601 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |