Welcome to similar projects and their integrated softwares:


Abyss
Ampliconnoise
Arb
Artemis
Assembly-conversion-tools
Beam2
Big-blast
Biocode
Bioperl
Biosquid
Bitseq
Blast2
Blimps-utils
Blixem
Catchall
Cdbfasta
Chimeraslayer
Clcsequenceviewer
Clustalx
Cortex-con
Cufflinks
Dendroscope
Dialign
Dotter
Emboss-lib
Estscan2
Exchanger
Fastdnaml
Fastqc
Fasttree
Galaxy-server
Gap2caf
Geneious
Genquery
Glam2
Glimmer3
Handlebar
Happy
Hmmer
Hmmer2-pvm
Hyphy
Infernal
Jalview
Jellyfish
Jemboss
Jprofilegrid
Keyring
Last-align
Libbiojava-java
Libbiojava-java-demos
Lucy
Maq
Maxd
Mdust
Mesquite
Microbiomeutil
Mira-3rdparty
Mothur
Mrbayes
Mrbayes-mpi
Mspcrunch
Mummer
Muscle
Nast-ier
Natefoo-add-scores
Natefoo-taxonomy
Ncbi-blast+-legacy
Ncbi-blast+-static
Ncbi-seg
Ncbi-tools-x11
Njplot
Norsnet
Nrdb
Ocount
Oligoarray
Omegamap
Paml
Perm
Phylip
Phyml
Picard-tools
Predictnls
Predictprotein
Priam
Probcons
Profbval
Profisis
Proftmb
Qiime
Qtlcart
Raxml
Ray
Rbs-finder
Readseq
Sampledata
Samtools
Seaview
Seqan-apps
Splitstree
Squint
Ssake
Staden
Stars
T-coffee
Tablet
Taxinspector
Tetra
Tigr-glimmer
Trace2dbest
Transterm-hp
Transtermhp
Tree-puzzle-doc
Treeviewx
Trnascan
Tutorials
Ugene
Usb-maker
Velvet-example
Velvet-long
Weblogo


ApE- A Plasmid Editor
AutodockSuite
Biopython
Clustal X
Emboss
EMNU
FinchTV
HMMER
IPRSCAN
MEMENEW
MIRA
MYEMBOSS
PHYLIP NEW
Polyxmass
Primer3plus
Rasmol
Readseq
Sigma Align
TREEFINDER
TreeView
TOPO


EMBOSS
ClustalX
PHYLIP
Avogadro
Pymol
SwissPDB Viewer
Jackal
GROMACS
AutoDock
Chemtool


Artemis
Bioperl
ClustalX
EMBOSS tools
Garlic
Glimmer
GP/Arka
MUMmer
NCBI tools
Open Babel
PyMOL
Ramachandran Plot Explorer
Raster3D
SeaView
TINKER
Jmol
MPQC
Open Babel
Rasmol
XDrawChem


Boxshade
Clustal-W, Clustal-X
Dialign
Genepop
Maft
Muscle
wwwBlast
Prank
Probcons
Bioperl
Sequence Manipulation Suite 2
Wise2
Gromacs
Garlic
Openbabel


Artemis
Bioperl
Blast
Clustalx
EMBOSS
Genesplicer
Hmmer
Paml
Phylip
Pymol
Jmol
Sequence Manipulation Suite
Treeview
Wemboss
WWWBlast
T-coffee
Jalview
Readseq
MODELLER
Patscan
Jaligner