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Protein Submission Form
(Searching of tumor homing peptides in a protein)

User(s) can submit protein sequence (in single letter code) to generate all possible peptide fragments (with predicted tumor homing ability and physicochemical properties). Mutants of the generated peptide fragments may be generated to design best putative tumor homing peptide. Graphical display of results is an interesting feature to estimate putative tumor homing peptides present in whole protein.

Paste Protein sequence (Please paste amino acid sequence in single letter code):      

Peptide fragment length:     SVM threshold:

Select model: NTCT5   NTCT10   Whole peptide   NTCT5 Up to 10 residues  

Physicochemical property:

Hydrophobicity    Sterichinderance    Side bulk   Hydropathicity    Amphipathicity    Hydrophilicity   
Net Hydrogen    Charge pI Molecular weight Secondary Structure* All

Show Results:

Tabular    Graphically


*If you check Secondary Structure, please have patience, predicting the secondary structure will take more time.

Department of Computational Biology Indraprastha Institute of Information Technology