MEME

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use MEME in your research, please cite the following paper:
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.

Discovered Motifs   |   Block diagrams of Motifs   |   Program information   |   Explanation

Discovered Motifs

Motif Overview

Motif 1
  • 1.2e-620
  • 40 sites
 Motif 1 Logo
Motif 2
  • 5.8e-554
  • 40 sites
 Motif 2 Logo
Motif 3
  • 1.5e-510
  • 40 sites
 Motif 3 Logo
Motif 4
  • 2.8e-468
  • 37 sites
 Motif 4 Logo
Motif 5
  • 1.5e-456
  • 21 sites
 Motif 5 Logo
Motif 6
  • 2.2e-282
  • 29 sites
 Motif 6 Logo
Motif 7
  • 1.5e-341
  • 40 sites
 Motif 7 Logo
Motif 8
  • 2.9e-321
  • 39 sites
 Motif 8 Logo
Motif 9
  • 2.0e-260
  • 28 sites
 Motif 9 Logo
Motif 10
  • 1.8e-253
  • 39 sites
 Motif 10 Logo
Motif 11
  • 6.1e-242
  • 37 sites
 Motif 11 Logo
Motif 12
  • 1.6e-253
  • 32 sites
 Motif 12 Logo
Motif 13
  • 8.7e-198
  • 18 sites
 Motif 13 Logo
Motif 14
  • 1.5e-181
  • 26 sites
 Motif 14 Logo
Motif 15
  • 3.8e-187
  • 37 sites
 Motif 15 Logo
Motif 16
  • 1.2e-179
  • 14 sites
 Motif 16 Logo
Motif 17
  • 1.3e-143
  • 10 sites
 Motif 17 Logo
Motif 18
  • 3.8e-135
  • 33 sites
 Motif 18 Logo
Motif 19
  • 7.1e-120
  • 19 sites
 Motif 19 Logo
Motif 20
  • 6.4e-107
  • 15 sites
 Motif 20 Logo

Further Analysis

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Motif 1

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Summary

Sequence Logo

E-value 1.2e-620
Width 25
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CK[GS][KA]GAKCS[RK]LMYDCC[TS]GSC[RS][SG][GT][KV][CG]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1022 5 3.68e-29 GLPV CKGKGAKCSRLMYDCCTGSCRSGKC TRG
371 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC TRNGLPG
370 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC TRNG
369 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC G
368 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC
349 1 3.60e-28 CKGAGAKCSRLMYDCCTGSCRSGKC G
348 1 3.60e-28 CKGAGAKCSRLMYDCCTGSCRSGKC
367 1 8.07e-28 CKGKGAKCSRLMYDCCTGSCRSGAC
351 1 2.85e-27 CKGKGAACSRLMYDCCTGSCRSGKC
366 1 4.51e-27 CKGKGAKCSRLMYDCCTGSCASGKC
359 1 4.51e-27 CKGKGAKCSLLMYDCCTGSCRSGKC
363 1 5.38e-27 CKGKGAKCSRLMFDCCTGSCRSGKC
358 1 5.38e-27 CKGKGAKCSALMYDCCTGSCRSGKC
361 1 7.07e-27 CKGKGAKCSRAMYDCCTGSCRSGKC
180 1 1.22e-26 CAGKGAKCSRLMYDCCTGSCRSGKC
346 1 1.83e-26 CKGAGAACSRLMYDCCTGSCRSGKC
364 1 2.09e-26 CKGKGAKCSRLMYACCTGSCRSGKC
362 1 3.17e-26 CKGKGAKCSRLAYDCCTGSCRSGKC
179 1 6.97e-26 CAGAGAKCSRLMYDCCTGSCRSGKC
347 1 1.49e-25 CKGAGAKCSRLLYDCCTGSCRSGKC
395 1 2.46e-25 CKSKGAKCSKLMYDCCTGSCSGTVG RC
397 1 5.73e-25 CKSKGAKCSRLMYDCCSGSCSGTVG RC
1314 3 6.44e-25 NS CKGAGAKCSRLPYDCCTGSCRSGAC
1270 2 6.44e-25 N CKGAGAKCSRLPYDCCTGSCRSGAC G
350 1 6.44e-25 CKGAGAKCSRLPYDCCTGSCRSGAC
1729 2 1.47e-24 Y CKSKGAKCSKLMYDCCSGSCSGTVG RC
394 1 1.47e-24 CKSKGAKCSKLMYDCCSGSCSGTVG RCY
393 1 1.47e-24 CKSKGAKCSKLMYDCCSGSCSGTVG RC
408 1 2.07e-24 CKYKGAKCSRLMYDCCSGSCSGTVG RC
357 1 2.07e-24 CKGKGAKCRKTSYDCCTGSCRSGKC
392 1 9.77e-24 CKSKGAKCSKLMYDCCSGSCSGAVG RC
398 1 1.50e-23 CKSKGAQCSKLMYDCCSGSCSGTVG RC
377 1 2.07e-23 CKGKGASCSRTMYNCCTGSCNRGKC
399 1 2.55e-23 CKSKGARCSKLMYDCCSGSCSGTVG RC
375 1 5.28e-23 CKGKGASCRKTMYDCCRGSCRSGRC
373 1 1.61e-22 CKGKGAPCTRLMYDCCHGSCSSSKG RC
374 1 5.24e-22 CKGKGASCHRTSYDCCTGSCNRGKC
376 1 2.62e-21 CKGKGASCRRTSYGCCTGSCRSGRC
378 1 5.46e-21 CKGKGQSCSKLMYDCCTGSCSRRGK C
457 1 3.54e-20 CQGRGASCRKTMYNCCSGSCRSGRC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
179 6.97e-26
180 1.22e-26
346 1.83e-26
347 1.49e-25
348 3.60e-28
349 3.60e-28
350 6.44e-25
351 2.85e-27
357 2.07e-24
358 5.38e-27
359 4.51e-27
361 7.07e-27
362 3.17e-26
363 5.38e-27
364 2.09e-26
366 4.51e-27
367 8.07e-28
368 3.68e-29
369 3.68e-29
370 3.68e-29
371 3.68e-29
373 1.61e-22
374 5.24e-22
375 5.28e-23
376 2.62e-21
377 2.07e-23
378 5.46e-21
392 9.77e-24
393 1.47e-24
394 1.47e-24
395 2.46e-25
397 5.73e-25
398 1.50e-23
399 2.55e-23
408 2.07e-24
457 3.54e-20
1022 3.68e-29
1270 6.44e-25
1314 6.44e-25
1729 1.47e-24
 
0
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30

Time 3.8 secs.

Motif 2

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Summary

Sequence Logo

E-value 5.8e-554
Width 25
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

T[HPR][PS]GGAC[GN][SG]HY[HQ]CC[SDN]D[FS]C[NDSI]TA[TAS][SRN]TC

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
725 3 1.06e-26 EC THSGGACNSHTQCCDDFCSTATSTC I
722 3 1.34e-26 EC THSGGACNSHDQCCNAFCDTATRTC V
724 3 2.60e-26 EC THSGGACNSHNQCCNAFCDTATRTC V
1592 1 3.21e-26 THSGGACNSHDQCCNAFCSTATRTC V
732 3 8.64e-26 EC TRSGGACNSHTQCCDDFCDTATRTC V
734 3 1.04e-25 EC TRSGGACNSHTQCCDDFCSTATSTC T
733 3 1.04e-25 EC TRSGGACNSHTQCCDDFCSTATSTC I
731 3 1.25e-25 EC TRSGGACNSHDQCCNAFCDTATRTC V
1614 1 1.49e-25 TRSGGACNSHNQCCDDFCSTATSTC V
1613 1 1.49e-25 TRSGGACNSHNQCCDDFCSTATSTC I
736 3 1.49e-25 EC TRSGGACNSHTQCCNAFCDTATRTC V
723 3 1.49e-25 EC THSGGACNSHDQCCNTFCDTATRTC V
495 2 2.50e-25 C THPGGACGGHHHCCSQFCNTAANAC N
721 3 4.79e-25 EC THSGGACNSHDQCCNAFCDTATRAC V
735 3 7.58e-25 EC TRSGGACNSHTQCCDHFCSTATSTC I
924 3 1.57e-24 GC THPGGACGGHHHCCSLFCNTAANAC N
493 2 1.57e-24 C THPGGACGGHHHCCSLFCNTAANAC N
738 3 1.80e-24 EC TRSGGACYSHNQCCDDFCSTATSTC V
737 3 1.80e-24 EC TRSGGACYSHNQCCDDFCSTATSTC I
497 2 2.71e-24 C THPGGACGGHHHCCSQSCNTAATTC N
720 3 3.54e-24 EC TDSGGACNSHDQCCNEFCSTATRTC I
674 3 4.03e-24 EC AHSGGACNSHDQCCNAFCDTATRTC V
1257 6 4.59e-24 MTMGC THPGGACGGHYHCCSQSCNTAANSC N
496 2 4.59e-24 C THPGGACGGHHHCCSQSCNTAANSC N
492 2 7.63e-24 C THPGGACGFYYHCCSNYCITISSTC N
494 2 1.41e-23 C THPGGACGGHHHCCSLSCNTAANAC N
593 3 2.55e-23 DC TPPDGACGFHYHCCSKFCITISSTC N
595 3 3.61e-23 DC TPPGGACGFYYHCCSNYCITISSTC R
594 3 3.61e-23 DC TPPGGACGFYYHCCSNYCITISSTC N
517 2 4.06e-23 C TPSGGACGFYYHCCSNYCITISSTC R
1256 6 5.72e-23 MTMGC THPGGACAGHHHCCSQSCNTAANSC N
506 2 1.25e-22 C TPPDGACGFHYHCCSKFCITVSSTC N
508 2 2.41e-22 C TPPGGACGVYYHCCSNYCITISSTC R
596 3 2.98e-22 DC TPPGGACGFYYHCCSNYCVTISSTC N
498 2 2.98e-22 C THPGGACGGHSHCCSLSCNTAANSC N
927 3 6.93e-22 GC TPPGGACGGHAHCCSQSCNILASTC NA
926 3 7.69e-22 GC TPPGGACGGHAHCCSQSCDILASTC NA
509 2 3.33e-20 C TPPGGSCGGHAHCCSKSCNIMASTC ND
489 2 3.03e-19 C TDPGGACGNPGHCCSKFCITTSSTC N
727 3 6.50e-19 EC TPPGGACNIHPHCCEEFCDMANNRC LEM

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
489 3.03e-19
492 7.63e-24
493 1.57e-24
494 1.41e-23
495 2.50e-25
496 4.59e-24
497 2.71e-24
498 2.98e-22
506 1.25e-22
508 2.41e-22
509 3.33e-20
517 4.06e-23
593 2.55e-23
594 3.61e-23
595 3.61e-23
596 2.98e-22
674 4.03e-24
720 3.54e-24
721 4.79e-25
722 1.34e-26
723 1.49e-25
724 2.60e-26
725 1.06e-26
727 6.50e-19
731 1.25e-25
732 8.64e-26
733 1.04e-25
734 1.04e-25
735 7.58e-25
736 1.49e-25
737 1.80e-24
738 1.80e-24
924 1.57e-24
926 7.69e-22
927 6.93e-22
1256 5.72e-23
1257 4.59e-24
1592 3.21e-26
1613 1.49e-25
1614 1.49e-25
 
0
5
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20
25
30

Time 7.4 secs.

Motif 3

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Summary

Sequence Logo

E-value 1.5e-510
Width 30
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AAN[DN]KA[ST]DL[MI]ALTVR[GE]CC[SA][DNH]P[AP]C[AS]LNNPxI

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
130 1 1.84e-32 AGNDKATDLMALTVRGCCSHPACAGNNPHI CS
129 1 1.84e-32 AGNDKATDLMALTVRGCCSHPACAGNNPHI CG
71 1 1.92e-31 AASDKASELMALAVRGCCSHPACAGNNPHI CGRRR
54 1 1.11e-30 AANDKASDLMALTVRGCCVYPPCAVNHPDI CRGGR
70 1 1.62e-30 AASDKASELMALAVRGCCSHPACAGNNPDI CG
67 1 3.37e-30 AANNKATDLMALTVRGCCDDPSCSIHMPFF CF
62 1 7.20e-29 AANKKASDLMALTVRGCCVYPPCAVNHPDI CG
57 1 8.45e-29 AANDKASVQIALTVQECCADAACSLTNPLI CGRR
56 1 8.45e-29 AANDKASVQIALTVQECCADAACSLTNPLI C
64 1 1.16e-28 AANNKATDLMALTVRGCCADPSCSILMPYF CI
59 1 1.16e-28 AANDKASVQIALTVQECCADSACSLTNPLI CGRR
58 1 1.16e-28 AANDKASVQIALTVQECCADSACSLTNPLI C
66 1 1.59e-28 AANNKATDLMALTVRGCCDDPPCRARYPFL CI
72 1 1.86e-28 AASDKASELMALAVRGCCSHPACAGSNAHI CGRRR
68 1 1.86e-28 AANNKATDLMALTVRGCCGNPSCSIHIPYV CN
74 1 3.45e-28 AASDKASELMALAVRGCCSNPACAGSNAHI CGRRR
73 1 3.15e-27 AASDKASELMALAVRGCCSNLACAGNNLHI CGRRR
162 1 4.18e-27 ATNNKATDLMALTVRGCCDDPSCRAENPFL CSWMG
47 1 1.45e-26 AANDKAPVQIVLTVQECCADSACSLTNPLI CGRR
46 1 1.45e-26 AANDKAPVQIVLTVQECCADSACSLTNPLI C
1567 1 1.90e-26 TANNKATDLMALTVRGCCGNPSCSIHIPYV CN
65 1 8.12e-26 AANNKATDLMALTVRGCCAHLPCALMYTAC SWGR
69 1 4.19e-25 AANNKATDLMARTVRGFCSDPSCRFRNPEL CDWRR
63 1 9.06e-24 AANNKATDLMALRYHECCKHPPCRNTRPDL CGGRR
128 1 3.61e-22 AGNAKMSALMALTIRGCCSHPVCSAMSPIC G
1262 3 3.01e-21 NA AANDKASDVIPLALQGCCSNPVCHVDHPEL CL
1093 5 1.55e-19 IKNT AASNKASSLVALVVRGCCYNPVCKKYYCWK G
53 1 2.22e-19 AANDKASDLMALRGGCCSRPPCILKHPEIC GRRR
50 1 2.43e-19 AANDKASDLMALRDGCCSDPACAVNHPDIC GGGR
52 1 2.65e-19 AANDKASDLMALRGGCCSRPPCILEHPEIC GRRR
51 1 3.17e-19 AANDKASDLMALRDGCCSDPACSVNHPDIC GGGR
8 1 1.95e-18 AAKFKAPALMELTVRDECCSDPRCAVKHQD LCG
9 1 2.73e-18 AAKFKAPALMELTVREGCCSDPRCSGKHQD LCS
55 1 2.97e-18 AANDKASNLMALRDECCPNPPCKASNPDLC DWRS
7 1 7.41e-18 AADYKRSDWIARVIDSCCSNPPCAHVHCHR RR
13 1 1.97e-17 AAKFKAPALMKRTVREACCSDPRCSGQHQE KCG
1092 5 2.13e-17 IKNT AASNKAPSLVAIAVRGCCYNPSCWPKTYCS
12 1 3.18e-17 AAKFKAPALMKRTVRDACCSDPRCSGKHQD LCG
6 1 5.11e-17 AADYKRSDWFAWVIHSCCSNPPCAHVNCRR RR
1261 2 6.91e-13 N AAAKAFGLITPTVRKGCCSNPACMLKNPNL C

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
6 5.11e-17
7 7.41e-18
8 1.95e-18
9 2.73e-18
12 3.18e-17
13 1.97e-17
46 1.45e-26
47 1.45e-26
50 2.43e-19
51 3.17e-19
52 2.65e-19
53 2.22e-19
54 1.11e-30
55 2.97e-18
56 8.45e-29
57 8.45e-29
58 1.16e-28
59 1.16e-28
62 7.20e-29
63 9.06e-24
64 1.16e-28
65 8.12e-26
66 1.59e-28
67 3.37e-30
68 1.86e-28
69 4.19e-25
70 1.62e-30
71 1.92e-31
72 1.86e-28
73 3.15e-27
74 3.45e-28
128 3.61e-22
129 1.84e-32
130 1.84e-32
162 4.18e-27
1092 2.13e-17
1093 1.55e-19
1261 6.91e-13
1262 3.01e-21
1567 1.90e-26
 
0
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15
20
25
30
35

Time 11 secs.

Motif 4

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Summary

Sequence Logo

E-value 2.8e-468
Width 25
Sites 37
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AA[KN][VA]K[YL][SF]K[TV]P[EQ][ES]CC[PS]NPPC[AF][AL]T[HN][SM][DE]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
16 1 2.48e-30 AAKVKYSKTPEECCPNPPCFATHSE ICGGRR
15 1 2.48e-30 AAKVKYSKTPEECCPNPPCFATHSE ICG
28 1 8.80e-30 AAKVKYSNTPEECCPNPPCFATHSE ICGVRR
27 1 8.80e-30 AAKVKYSNTPEECCPNPPCFATHSE ICGV
30 1 1.87e-29 AAKVKYSNTPEECCSNPPCFATHSE ICGGRR
29 1 1.87e-29 AAKVKYSNTPEECCSNPPCFATHSE ICG
18 1 9.42e-29 AAKVKYSKTPEECCPNPPCFATHSN ICGGRR
17 1 9.42e-29 AAKVKYSKTPEECCPNPPCFATHSN ICG
31 1 2.91e-28 AAKVKYSNTREECCPNPPCFATHSE ICGGRR
20 1 2.91e-28 AAKVKYSKTPEECCPNPPCFATNSD ICGGRR
19 1 2.91e-28 AAKVKYSKTPEECCPNPPCFATNSD ICG
22 1 6.36e-28 AAKVKYSLTPAECCPNPPCFAQHSD LCGARR
21 1 6.36e-28 AAKVKYSLTPAECCPNPPCFAQHSD LCGA
32 1 7.75e-27 AAKVKYSNTREECCPNPPCFATNSD ICGGRR
24 1 9.52e-27 AAKVKYSLTPAECCPNPPCFAQHSN LCGARR
23 1 9.52e-27 AAKVKYSLTPAECCPNPPCFAQHSN LCGA
26 1 1.42e-26 AAKVKYSLTPAECCTNPPCFAQHSD LCGARR
25 1 1.42e-26 AAKVKYSLTPAECCTNPPCFAQHSD LCGA
34 1 7.59e-24 AANAKLFAVMQSCCSTPPCALRHMD MCG
33 1 7.59e-24 AANAKLFAVMQSCCSTPPCALRHMD MC
37 1 1.75e-22 AANAKLFAVRQSCCSTPPCALLYME MCG
41 1 1.97e-22 AANAKLFDVRQSCCSTPPCALLYME MCG
36 1 1.97e-22 AANAKLFAVMQSCCSTPPRALRHMD MCG
35 1 1.97e-22 AANAKLFAVMQSCCSTPPRALRHMD MC
45 1 2.19e-20 AANAKLSERLDPCCREPPCASTHTD ICTRRR
44 1 2.19e-20 AANAKLSERLDPCCREPPCASTHID RCG
43 1 2.42e-20 AANAKLSERLDPCCRDPPCASTHTD ICTRRR
42 1 2.42e-20 AANAKLSERLDPCCRDPPCASTHID RCG
39 1 5.79e-20 AANAKLFDVGQSCCSAPLCALLYMV ICG
38 1 5.79e-20 AANAKLFDVGQSCCSAPLCALLYMV IC
40 1 1.13e-19 AANAKLFDVRQSCCSAPLCALLYRV MCG
150 1 4.08e-19 APNVKDSKASGSCCDNPSCAVNNSH CGRRR
149 1 4.08e-19 APNVKDSKASGSCCDNPSCAVNNSH C
148 1 1.68e-18 APNVKDSKASGSCCDNPSCAVNNRH CGRRR
147 1 1.68e-18 APNVKDSKASGSCCDNPSCAVNNRH C
157 1 1.54e-13 ASALIAQAILRDCCSNPPCAHNNPD C
1263 2 3.18e-12 N AAANDKASGVNGCCSNPACHVDHAE LC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
15 2.48e-30
16 2.48e-30
17 9.42e-29
18 9.42e-29
19 2.91e-28
20 2.91e-28
21 6.36e-28
22 6.36e-28
23 9.52e-27
24 9.52e-27
25 1.42e-26
26 1.42e-26
27 8.80e-30
28 8.80e-30
29 1.87e-29
30 1.87e-29
31 2.91e-28
32 7.75e-27
33 7.59e-24
34 7.59e-24
35 1.97e-22
36 1.97e-22
37 1.75e-22
38 5.79e-20
39 5.79e-20
40 1.13e-19
41 1.97e-22
42 2.42e-20
43 2.42e-20
44 2.19e-20
45 2.19e-20
147 1.68e-18
148 1.68e-18
149 4.08e-19
150 4.08e-19
157 1.54e-13
1263 3.18e-12
 
0
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30

Time 14.1 secs.

Motif 5

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Summary

Sequence Logo

E-value 1.5e-456
Width 30
Sites 21
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[FV]CNL[RK][RM]CQLSCRSLGLLGKCIGDKCECVKH

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
117 2 3.20e-37 A FCNLRMCQLSCRSLGLLGKCIGDKCECVKH
121 2 1.41e-36 A FCNLRRCQLSCRSLGLLGKCIGDKCECVKH
1619 2 3.14e-36 T VCNLRRCQLSCRSLGLLGKCIGDKCECVKH
112 2 3.47e-36 A FCNLKMCQLSCRSLGLLGKCIGDKCECVKH
1589 2 8.25e-36 T FCNLRRCQLSCRSLGLLGKCIGVKCECVKH
114 2 8.25e-36 A FCNLMRCQLSCRSLGLLGKCIGDKCECVKH
1618 2 1.02e-35 T VCNLRMCQLSCRSLGLLGKCIGVKCECVKH
1620 2 1.21e-35 T VCNLRRCQLSCRSLGLLGKCIGVKCECVKH
171 2 1.21e-35 A VCNLRRCQLSCRSLGLLGKCIGVKCECVKH
115 2 1.97e-35 A FCNLRKCQLSCRSLGLLGKCIGDKCECVKH
166 2 2.24e-35 A VCNLARCQLSCRSLGLLGKCIGDKCECVKH
113 2 2.24e-35 A FCNLLMCQLSCRSLGLLGKCIGDKCECVKH
116 2 3.21e-35 A FCNLRLCQLSCRSLGLLGKCIGDKCECVKH
168 2 2.37e-34 A VCNLKRCQLSCASLGLLGKCIGDKCECVKH
169 2 7.73e-34 A VCNLKRCQLSCRSLGLLGKCIGDKCECVKA
165 2 9.85e-34 A VCNLARCQLSCASLGLLGKCIGDKCECVKH
167 2 1.92e-33 A VCNLKRCPLSCRSLGLLGKCIGDKCECVKH
118 2 7.21e-33 A FCNLRMCQLSCRSLGLLGKCMGKKCRCVKH
170 2 2.93e-32 A VCNLKRCQLSCRSLGLLGKCMNGKCECVKH
119 2 2.13e-30 A FCNLRRCELSCRSLGLLGKCIGEECKCVPH
120 2 3.57e-29 A FCNLRRCELSCRSLGLLGKCIGEECKCVPY

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
112 3.47e-36
113 2.24e-35
114 8.25e-36
115 1.97e-35
116 3.21e-35
117 3.20e-37
118 7.21e-33
119 2.13e-30
120 3.57e-29
121 1.41e-36
165 9.85e-34
166 2.24e-35
167 1.92e-33
168 2.37e-34
169 7.73e-34
170 2.93e-32
171 1.21e-35
1589 8.25e-36
1618 1.02e-35
1619 3.14e-36
1620 1.21e-35
 
0
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30

Time 22 secs.

Motif 6

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Summary

Sequence Logo

E-value 2.2e-282
Width 25
Sites 29
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

A[GD][SG][GA][PE][CM][EC]FH[RL][PG][YS][TN]CCSG[HWY]CI[IV][WLF]VCA

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1027 11 4.85e-26 GLTRPSKRCL AGSAPCEFHRGYTCCSGHCLIWVCA
411 3 4.85e-26 CL AGSAPCEFHRGYTCCSGHCLIWVCA
1026 11 1.47e-25 GLSRPSKRCI GGGDPCEFHRGYTCCSEHCIIWVCA
1024 11 1.47e-25 GLSRPSKGCI GGGDPCEFHRGYTCCSEHCIIWVCA
333 3 1.47e-25 CI GGGDPCEFHRGYTCCSEHCIIWVCA
1020 11 2.49e-25 GLNRPSKRCL AGSAPCEFHKRSTCCSGHCIIWWCA
410 3 2.49e-25 CL AGSAPCEFHKRSTCCSGHCIIWWCA
1025 11 4.94e-25 GLSRPSKRCI AGGQPCEFHRGYMCCSEHCIIFVCA
329 3 4.94e-25 CI AGGQPCEFHRGYMCCSEHCIIFVCA
1019 11 6.90e-25 GLIRPSKRCI GGGDPCEFHRPYTCCSGYCIVFVCA
334 3 6.90e-25 CI GGGDPCEFHRPYTCCSGYCIVFVCA
1021 11 5.31e-24 GLNRPSKRCL AGSARCEFHKPSTCCSGHCIFWWCA
413 3 5.31e-24 CL AGSARCEFHKPSTCCSGHCIFWWCA
698 4 7.54e-23 ECI EGSEPCEVFRPYTCCSGHCIIFVCA
412 3 7.54e-23 CL AGSARCEFHKPSSCCSGHCIFWWCA
1192 6 5.99e-21 LNKRC IDGGEICDIFFPNCCSGWCIILVCA
330 2 5.99e-21 C IDGGEICDIFFPNCCSGWCIILVCA
1704 3 1.39e-20 WC KQSGEMCNLLDQNCCDGYCIVFVCT
417 2 1.72e-20 C LDAGEMCDLFNSKCCSGWCIILVCA
1705 3 2.33e-20 WC KQSGEMCNLLDQNCCDGYCIVLVCT
1707 3 3.49e-20 WC KQSGEMCNVLDQNCCDGYCIVFVCT
1706 3 5.72e-20 WC KQSGEMCNLLDQNCCEGYCIVLVCT
1193 6 1.13e-19 LNKRC LDGGEICGILFPSCCSGWCIVLVCA
419 2 1.13e-19 C LDGGEICGILFPSCCSGWCIVLVCA
416 2 1.36e-19 C LDAGEMCDLFNSKCCSGWCIILFCA
573 4 1.81e-16 DCI PGGENCDVFRPYRCCSGYCILLLCA
183 2 2.08e-15 C AQSSELCDALDSDCCSGVCMVFFCL
1744 4 4.14e-15 YCV PKSGLCTIFQPGKCCSGWCLIYRCT
84 4 3.22e-12 ACK PKNNLCAITEMAECCSGFCLIYRCS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
84 3.22e-12
183 2.08e-15
329 4.94e-25
330 5.99e-21
333 1.47e-25
334 6.90e-25
410 2.49e-25
411 4.85e-26
412 7.54e-23
413 5.31e-24
416 1.36e-19
417 1.72e-20
419 1.13e-19
573 1.81e-16
698 7.54e-23
1019 6.90e-25
1020 2.49e-25
1021 5.31e-24
1024 1.47e-25
1025 4.94e-25
1026 1.47e-25
1027 4.85e-26
1192 5.99e-21
1193 1.13e-19
1704 1.39e-20
1705 2.33e-20
1706 5.72e-20
1707 3.49e-20
1744 4.14e-15
 
0
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25
30
35

Time 25 secs.

Motif 7

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Summary

Sequence Logo

E-value 1.5e-341
Width 27
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CTP[PR]GG[AY]CY[YA]H[YS]HCCS[LN][FA]CN[LK]x[TS][KN][RKV]C[LV]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
503 1 2.98e-23 CTPAGGACDATTECCILFCNLATKKCQ VPTFP
516 1 4.64e-23 CTPRNGYCYYRYFCCSRACNLTIKRCL
486 1 1.10e-22 CTAPGGACYAAYTCCSNACNLNTKKCV LS
500 1 4.94e-22 CTPAGDACDATTECCILFCNLATKKCQ VPTFP
1363 2 5.64e-22 Q CTPVGGSCSRHYHCCSLYCNKNIGQCL ATSYP
928 2 2.05e-21 G CTPRNGACGYHSHCCSNFCHTWANVCL
487 1 2.63e-21 CTAPGGACYADNTCCSNACNLNTKKCV LS
1366 2 2.98e-21 Q CTPVGGYCSRHYHCCSNHCIKSIGRCV AH
499 1 4.87e-21 CTPAGDACDATTECCILFCNLATKECQ VPAFP
525 1 5.49e-21 CTSPGGACYSASTCCSKACNLTTKRCV LS
1638 2 7.88e-21 V CTPPEGYCTYHRDCCDLYCNKTTNVCL ET
515 1 8.88e-21 CTPRNGVCFYSYFCCSRACNPSTKRCL
518 1 1.27e-20 CTPSGGACYVASTCCSNACNLNSNKCV
519 1 1.42e-20 CTPSGGACYYDYFCCSMTCNFNSKSCV
512 1 1.42e-20 CTPPSGYCYHPYYCCSRACNLTRKRCL
502 1 1.60e-20 CTPAGDACDATTNCCILFCNLATKKCE VPTFP
1365 2 2.02e-20 Q CTPVGGYCSRHHHCCSNHCIKSIGRCV AH
514 1 3.57e-20 CTPRHGVCFYSYFCCSKACNPSSKRCL
1364 2 4.00e-20 Q CTPVGGYCFDHHHCCSNHCIKSIGRCV AH
511 1 5.01e-20 CTPPGGYCYHPDPCCSQYCNFPRKHCL
930 2 5.60e-20 G CTPRNGFCRYHSHCCSNFCHTWAIMCL
501 1 5.60e-20 CTPAGDACDATTKCCIPFCNLATKKCQ VPTFP
504 1 2.55e-19 CTPAGKACDATATCCVLFCNLVTNKCQ VPRFP
510 1 3.15e-19 CTPPGGYCYHPDPCCSQVCNFPRKHCL
513 1 4.31e-19 CTPRHGVCFYSYFCCSKACNPSSKRCH
929 2 4.78e-19 G CTPRNGFCRYHSDCCSNFCHTWAIMCL
728 2 9.77e-19 E CTPPGGACYYHSQCCGDFCQRYINSCL
521 1 1.78e-18 CTQTNGACYHRDTCCSKSCNLTINRCL AS
1361 2 2.17e-18 Q CSPNGGSCSRHYHCCSLWCNKDSGVCV ATSYP
449 1 5.18e-18 CNDPGGSCTRHYHCCQLYCNKQESVCL ENEPAF
505 1 1.75e-17 CTPGGEACDATTNCCFLTCNLATNKCR SPNFP
453 1 6.73e-17 CNNRGGGCSQHPHCCSGTCNKTFGVCL
718 2 7.34e-17 E CSSPDESCTYHYNCCQLYCNKEENVCL ENSPEV
729 2 1.14e-16 E CTRPGGACYYDSHCCRHVCHEVFNTCM
726 2 1.35e-16 E CTPPEGACNHPSHCCEDFCDRGRNRCM
763 7 1.47e-16 FAVIFT CTPPGSHCTGHSDCCSDFCSTMSDVCQ
452 1 1.60e-16 CNNRGGGCSQHPHCCSGTCNKIFGVCL
730 2 4.78e-16 E CTRSGGACNSHDQCCANFCRKATSTCM
483 1 2.40e-15 CSPPGSYCFGPAACCSNFCSTMSDVCQ ENWSG
524 1 9.23e-14 CTSPDGACNTPPQCCSKYCISISTTCN

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
449 5.18e-18
452 1.60e-16
453 6.73e-17
483 2.40e-15
486 1.10e-22
487 2.63e-21
499 4.87e-21
500 4.94e-22
501 5.60e-20
502 1.60e-20
503 2.98e-23
504 2.55e-19
505 1.75e-17
510 3.15e-19
511 5.01e-20
512 1.42e-20
513 4.31e-19
514 3.57e-20
515 8.88e-21
516 4.64e-23
518 1.27e-20
519 1.42e-20
521 1.78e-18
524 9.23e-14
525 5.49e-21
718 7.34e-17
726 1.35e-16
728 9.77e-19
729 1.14e-16
730 4.78e-16
763 1.47e-16
928 2.05e-21
929 4.78e-19
930 5.60e-20
1361 2.17e-18
1363 5.64e-22
1364 4.00e-20
1365 2.02e-20
1366 2.98e-21
1638 7.88e-21
 
0
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25
30

Time 33.2 secs.

Motif 8

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Summary

Sequence Logo

E-value 2.9e-321
Width 25
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[PI]P[GS]G[FD][CL][GC]FP[KS][DI][GH][PI][PQ]CCSG[WK]C[FA]FVC[AL]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1216 5 1.19e-23 LRWC IPSGDLCFRSDHIQCCSGKCAFVCL
1745 5 1.39e-23 YDCE PPGNFCGMIKIGPPCCSGWCFFACA
1200 10 1.39e-23 LNTRDDDCE PPGNFCGMIKIGPPCCSGWCFFACA
669 6 1.39e-23 DYDCE PPGNFCGMIKIGPPCCSGWCFFACA
617 6 1.39e-23 DDDCE PPGNFCGMIKIGPPCCSGWCFFACA
606 5 1.39e-23 DDCE PPGNFCGMIKIGPPCCSGWCFFACA
1310 7 1.62e-23 NRLSWC IPSGDLCFPSDHIQCCSAKCAFVCL
1308 7 1.62e-23 NRLSRC IPSGDLCFPSDHIQCCSAKCAFVCL
1312 7 6.14e-23 NRLSWC IPTGDLCFPSDHIQCCSGKCTFVCM
599 4 7.09e-23 DCV AGGHFCGFPKIGGPCCSGWCFFVCA
1309 7 2.49e-22 NRLSWC IPSGDLCFPSDHIQCCNAKCAFVCL
1307 7 2.49e-22 NRLSRC IPSGDLCFPSDHIQCCNAKCAFVCL
1746 5 3.26e-22 YDCE PPGNFCGMIKVGPPCCSGWCFFACA
1215 5 3.26e-22 LRWC IPSGDLCFRSDHIGCCSGKCAFVCL
1311 7 4.27e-22 NRLSWC IPSGDLCFPSDHIRCCSAKCAFVCL
739 5 5.56e-22 EDCE AGGRFCGFPKIGEPCCSGWCFFVCA
1217 5 7.24e-22 LRWC IPSGELCFRSDHIGCCSGKCAFVCL
1639 4 1.78e-21 VCV DGGTFCGFPKIGGPCCSGWCIFVCL
1305 7 5.42e-21 NRLSRC IPSGDLCFPSDHIQCCNAECAFVCL
1214 5 5.42e-21 LRWC IPRGDLCFPSDRIQCCSGKCTFVCM
467 3 1.41e-20 CR PPGMVCGFPKPGPYCCSGWCFAVCL PV
619 6 2.52e-20 DDECE PPGDFCGFFKIGPPCCSGWCFLWCA
466 3 2.30e-19 CR PGGMICGFPKPGPYCCSGWCFVVCL
1367 5 5.93e-19 QDCA AGGQFCGFPKIGGPCCSGWCLGVCA
585 4 1.64e-18 DCQ DSGVVCGFPKPEPHCCSGWCLFVCA
1213 5 5.33e-18 LRGC VPSGEICYFMDHIGCCSGKCTFVCM
1191 10 2.40e-17 LNKKGDDCL AVKKNCGFPKLGGPCCSGLCFFVCA
600 4 1.52e-15 DCV KAGTACGFPKPEPACCSSWCIFVCT
1360 3 3.98e-15 QC RVEGEICGMLFEAQCCDGWCFFVCM
1198 8 6.88e-15 LNQRDCL SKNAFCAWPILGPLCCSGWCLYVCM
740 5 1.38e-14 EDCI AVGQLCVFWNIGRPCCSGLCVFACT VKLP
923 3 2.17e-14 GC REGGEFCGTLYEERCCSGWCFFVCV
336 3 5.28e-14 CI PDHHGCGLLHHSRYCCNGTCFFVCI P
914 4 5.68e-14 GCL DPGYFCGTPFLGAYCCGGICLIVCI ET
1683 9 8.78e-14 VSDRLRWC VPSGEVCRRYEFVGCCSGKCFFVCS
1637 5 8.76e-13 VCIA DDMPCGFGLFGGPLCCSGWCLFVCL
1199 8 2.70e-12 LNQSDCL PRDTFCALPQLGLLCCSGRCLLFCV
1269 4 1.33e-11 NCI PKNHFCGLLHHSRNCCTPTCLIVCF
460 3 1.37e-10 CQ RANFVCDAFHHAAVCCEGVCVLVCA W

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
336 5.28e-14
460 1.37e-10
466 2.30e-19
467 1.41e-20
585 1.64e-18
599 7.09e-23
600 1.52e-15
606 1.39e-23
617 1.39e-23
619 2.52e-20
669 1.39e-23
739 5.56e-22
740 1.38e-14
914 5.68e-14
923 2.17e-14
1191 2.40e-17
1198 6.88e-15
1199 2.70e-12
1200 1.39e-23
1213 5.33e-18
1214 5.42e-21
1215 3.26e-22
1216 1.19e-23
1217 7.24e-22
1269 1.33e-11
1305 5.42e-21
1307 2.49e-22
1308 1.62e-23
1309 2.49e-22
1310 1.62e-23
1311 4.27e-22
1312 6.14e-23
1360 3.98e-15
1367 5.93e-19
1637 8.76e-13
1639 1.78e-21
1683 8.78e-14
1745 1.39e-23
1746 3.26e-22
 
0
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25
30

Time 40.9 secs.

Motif 9

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Summary

Sequence Logo

E-value 2.0e-260
Width 27
Sites 28
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[YE]C[QR]K[WL][MFL][WG][GT]C[DK][ST][ET][RA][DK]CC[EK][GHD][LM]VC[RK]LWCK[YK]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1738 1 3.41e-32 YCQKWMWTCDSERKCCEGMVCRLWCKK KLW
1739 1 6.23e-31 YCQKWMWTCDSERKCCEGYVCELWCKY NL
1735 1 6.23e-31 YCQKWMWTCDEERKCCEGLVCRLWCKK KIEW
1734 1 6.23e-31 YCQKWMWTCDEERKCCEGLVCRLWCKK KIEEG
1733 1 1.76e-30 YCQKWLWTCDSERKCCEDMVCRLWCKK RL
1737 1 9.65e-30 YCQKWMWTCDSARKCCEGLVCRLWCKK II
1736 1 3.00e-29 YCQKWMWTCDEERKCCEGLVCRLWCKR IINM
1732 1 3.00e-29 YCQKFLWTCDTERKCCEDMVCELWCKY KE
1740 1 8.81e-29 YCQKWMWTCDSKRKCCEDMVCQLWCKK RL
1731 1 9.70e-28 YCQKFLWTCDTERKCCEDMVCELWCKL EK
1730 1 1.23e-26 YCQFKMWTCDSERKCCEDMVCRLWCKL NL
608 2 1.63e-22 D DCGKLFSGCDTNADCCEGYVCRLWCKL DW
607 2 5.81e-22 D DCGGLFSGCDSNADCCEGYVCRLWCKY KL
609 2 1.08e-21 D DCGTLFSGCDTSKDCCEGYVCHLWCKY K
715 1 9.30e-21 ECRYLFGGCSSTSDCCKHLSCRSDWKY CAWDGTFS
713 1 9.30e-21 ECRYLFGGCKTTADCCKHLGCKFRDKY CAWDFTFS
714 1 1.32e-20 ECRYLFGGCKTTSDCCKHLGCKFRDKY CAWDFTFS
697 1 2.13e-19 ECGTLFSGCSTHADCCEGFICKLWCRY ERTW
1522 2 2.93e-19 S ECRWFMGGCDSTLDCCKHLSCKMGLYY CAWDGTF
696 1 3.26e-19 ECGKFMWKCKNSNDCCKDLVCSSRWKW CVLASPF
1581 1 6.14e-19 TCRYLFGGCKTTADCCKHLACRSDGKY CAWDGTF
788 2 2.11e-18 G ACRWFLGGCKSTSDCCEHLSCKMGLDY CAWDGTF
708 1 2.48e-17 ECRKMFGGCSVDSDCCAHLGCKPTLKY CAWDGT
711 1 5.28e-17 ECRWYLGGCKEDSECCEHLQCHSYWEW CLWDGSF
716 1 2.08e-15 ECRYWLGGCSAGQTCCKHLVCSRRHGW CVWDGTFS
1251 2 6.34e-12 M PCPKILKQCKSDEDCCRGWKCFGFSIK DKMCISR
1719 5 3.28e-10 WSTI VKLTICPTLKSMAKKCEGSIATMIKKK CDK
89 1 1.49e-09 ACSRAGENCYKSGRCCDGLYCKAYVVT CYKP

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
89 1.49e-09
607 5.81e-22
608 1.63e-22
609 1.08e-21
696 3.26e-19
697 2.13e-19
708 2.48e-17
711 5.28e-17
713 9.30e-21
714 1.32e-20
715 9.30e-21
716 2.08e-15
788 2.11e-18
1251 6.34e-12
1522 2.93e-19
1581 6.14e-19
1719 3.28e-10
1730 1.23e-26
1731 9.70e-28
1732 3.00e-29
1733 1.76e-30
1734 6.23e-31
1735 6.23e-31
1736 3.00e-29
1737 9.65e-30
1738 3.41e-32
1739 6.23e-31
1740 8.81e-29
 
0
5
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15
20
25
30
35

Time 48.3 secs.

Motif 10

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Summary

Sequence Logo

E-value 1.8e-253
Width 25
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

C[LS]NAGEFC[GDN][IV]F[PF][GPQ][LN]CC[SG][GEY][CF]C[LF][LF][FVW]C[IL]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
647 3 4.94e-21 DG CYNAGTFCGIRPGLCCSEFCFLWCI TFVDS
1194 5 7.92e-21 LNKR CLEFGEVCNFFFPTCCGYCVLLVCL
746 3 7.92e-21 EG CSSGGTFCGIHPGLCCSEFCFLWCI TFID
645 3 7.92e-21 DG CSSGGTFCGIHPGLCCSEFCFLWCI TFID
420 1 1.26e-20 CLEFGELCNFFFPTCCGYCVLLVCL
670 3 1.97e-20 EA CYNAGSFCGIHPGLCCSEFCILWCI TFVDS
1754 3 3.08e-20 YG CSNAGAFCGIHPGLCCSELCLVWCT
418 1 5.48e-20 CLDAGEVCDIFFPTCCGYCILLFCA
646 3 9.61e-20 DG CSSGGTFCGIRPGLCCSEFCFLWCI TFID
644 3 1.10e-19 DG CSNAGGFCGIHPGLCCSEICLVWCT
643 3 1.27e-19 DG CSNAGAFCGIHPGLCCSEICIVWCT
1753 3 1.45e-19 YG CSNAGAFCGIHPGLCCSELCLGWCT
427 1 1.45e-19 CLGFGEVCNFFFPNCCSYCVALVCL
428 1 2.49e-19 CLGGGEVCDIFFPQCCGYCILLFCT
1195 5 2.84e-19 LNKR CQEFGEVCNFFFPDCCGYCVLLLCI
415 1 1.32e-18 CLDAGEICDFFFPTCCGYCILLFCA
387 1 1.69e-18 CKQAGESCDIFSQNCCVGTCAFICI E
344 1 3.08e-18 CKAENELCNIFIQNCCDGTCLLICI QNPQ
529 1 5.55e-18 CVDPGEFCGPGFGDCCTGFCLLVCI
345 1 2.67e-17 CKAESEACNIITQNCCDGKCLFFCI QIPE
328 1 7.71e-17 CIAESEPCNIITQNCCDGKCLFFCI QIPE
438 1 1.42e-16 CLSGGEVCDFLFPKCCNYCILLFCS
384 1 1.93e-16 CKQADEPCDVFSLDCCTGICLGVCM W
385 1 2.13e-16 CKQADEPCDVFSLECCTGICLGFCT W
386 1 3.16e-16 CKQADESCNVFSLDCCTGLCLGFCV S
634 3 5.63e-16 DE CSAPGAFCLIRPGLCCSEFCFFACF
409 1 5.63e-16 CLAEHETCNIFTQNCCEGVCIFICV QAPE
425 1 2.71e-15 CLGFGEACLMLYSDCCSYCVALVCL
543 1 5.50e-15 CYGFGEACLVLYTDCCGYCVLAVCL
709 2 6.00e-15 E CRQPGEFCFPVVAKCCGGTCLVICI
530 1 1.09e-14 CVEDGDFCGPGYEECCSGFCLYVCI
465 1 1.81e-14 CRLGAESCDVISQNCCQGTCVFFCL P
421 1 5.65e-14 CLEKGVLCDPSAGNCCSGECVLVCL
455 1 8.38e-14 CPNTGELCDVVEQNCCYTYCFIVVC PI
454 1 8.38e-14 CPNTGELCDVVEQNCCYTYCFIVVC L
535 1 3.07e-13 CVPYEGPCNWLTQNCCDELCVFFCL
1196 7 5.15e-13 LNKRII CFPDYMFCGVNVFLCCSGNCLLICV P
520 1 5.54e-13 CTQSGELCDVIDPDCCNNFCIIFFC I
717 2 3.96e-12 E CSESGEWCGLDPALCCGSSCFFTCN

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
328 7.71e-17
344 3.08e-18
345 2.67e-17
384 1.93e-16
385 2.13e-16
386 3.16e-16
387 1.69e-18
409 5.63e-16
415 1.32e-18
418 5.48e-20
420 1.26e-20
421 5.65e-14
425 2.71e-15
427 1.45e-19
428 2.49e-19
438 1.42e-16
454 8.38e-14
455 8.38e-14
465 1.81e-14
520 5.54e-13
529 5.55e-18
530 1.09e-14
535 3.07e-13
543 5.50e-15
634 5.63e-16
643 1.27e-19
644 1.10e-19
645 7.92e-21
646 9.61e-20
647 4.94e-21
670 1.97e-20
709 6.00e-15
717 3.96e-12
746 7.92e-21
1194 7.92e-21
1195 2.84e-19
1196 5.15e-13
1753 1.45e-19
1754 3.08e-20
 
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Time 51.4 secs.

Motif 11

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Summary

Sequence Logo

E-value 6.1e-242
Width 25
Sites 37
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CK[SG][PK]GA[SK]C[SR][KRP][TL][MS]Y[DN]CCSG[SC]CS[RG][TGS]R[CK]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
389 1 1.00e-23 CKSKGAKCDRLMYDCCSGSCSGTVG RC
388 1 1.00e-23 CKSKGAKCDKLMYDCCSGSCSGTVG RC
470 1 5.86e-23 CRSKGAKCSKLMYDCCSGSCSGTVG RC
396 1 5.86e-23 CKSKGAKCSRLLYDCCSGSCSGTVG RC
391 1 5.86e-23 CKSKGAKCSKLLYDCCSGSCSGTVG RC
390 1 1.02e-22 CKSKGAKCSKLAYDCCSGSCSGTVG RC
1607 3 5.94e-22 TR CKGKGAPCRKTMYDCCSGSCGRRGK CG
372 1 5.94e-22 CKGKGAPCRKTMYDCCSGSCGRRGK C
382 1 8.31e-22 CKLKGQSCSRLMYDCCSGSCGRSGK C
407 1 1.61e-21 CKYKGAKCSRLLYDCCSGSCSGTVG RC
1552 4 2.60e-21 STR CQGRGASCRKTMYNCCSGSCNRGRC G
456 1 2.60e-21 CQGRGASCRKTMYNCCSGSCNRGRC
381 1 1.21e-20 CKLKGQSCRKTSYDCCSGSCGRSGK C
405 1 1.88e-20 CKSTGASCRRTSYDCCTGSCDRGRC
379 1 2.18e-20 CKGPGAKCLKTMYDCCKYSCSRGRC
459 1 1.54e-19 CQGRGASCRRTSYDCCTGSCRSGRC
458 1 1.54e-19 CQGRGASCRKTSYDCCTGSCRSGRC
404 1 3.41e-19 CKSTGASCRRTPYDCCTGSCRSGRC
441 1 6.55e-18 CLSPGSSCSRLMYNCCRSCNPYSRK CR
440 1 1.04e-16 CLSPGSSCSPTSYNCCRSCNPYSRK CR
439 1 1.04e-16 CLSPGSSCSPTSYNCCRSCNPYSRK C
401 1 1.16e-16 CKSPGSSCSPTSYNCCRSCNPYTKR CY
403 1 2.39e-16 CKSPGTPCSRGMRDCCTSCLSYSNK CRRY
380 1 2.39e-16 CKGPGASCIRIAYNCCKYSCRNGKC S
402 1 7.93e-16 CKSPGTPCSRGMRDCCTSCLLYSNK CRRY
343 1 7.93e-16 CKAAGKSCSRIAYNCCTGSCRSGKC
1328 2 2.76e-15 P CKTPGRKCFPHQKDCCGRACIITIC P
1327 2 4.00e-15 P CKKTGRKCFPHQKDCCGRACIITIC P
1326 2 1.55e-14 P CKKSGRKCFPHQKDCCGRACIITIC P
164 7 1.69e-14 ATSNRP CKPKGRKCFPHQKDCCNKTCTRSKC P
383 1 5.20e-14 CKPPGSPCRVSSYNCCSSCKSYNKK CG
463 1 2.92e-13 CRIPNQKCFQHLDDCCSRKCNRFNK CV
699 2 2.79e-11 E CKGFGKSCVPGKNECCSGYACNSRD KWCKVLL
478 1 8.13e-11 CSNFGSDCIPATHDCCSGECFGFED MGLCT
1418 6 2.27e-10 QVSWW CGKPEATCGKLYLKCCSGMCNKANW KCL
313 1 3.31e-10 CDAPNAPCEKFDNDCCDACMLREKQ QPICAV
426 1 8.30e-10 CLGFGEACLMLYSDCCSYCVGAVCL

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
164 1.69e-14
313 3.31e-10
343 7.93e-16
372 5.94e-22
379 2.18e-20
380 2.39e-16
381 1.21e-20
382 8.31e-22
383 5.20e-14
388 1.00e-23
389 1.00e-23
390 1.02e-22
391 5.86e-23
396 5.86e-23
401 1.16e-16
402 7.93e-16
403 2.39e-16
404 3.41e-19
405 1.88e-20
407 1.61e-21
426 8.30e-10
439 1.04e-16
440 1.04e-16
441 6.55e-18
456 2.60e-21
458 1.54e-19
459 1.54e-19
463 2.92e-13
470 5.86e-23
478 8.13e-11
699 2.79e-11
1326 1.55e-14
1327 4.00e-15
1328 2.76e-15
1418 2.27e-10
1552 2.60e-21
1607 5.94e-22
 
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Time 54.3 secs.

Motif 12

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Summary

Sequence Logo

E-value 1.6e-253
Width 26
Sites 32
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

VSCTGS[KP]DCY[SA][PT]C[KR]KQ[TA]G[CK][PA]N[AG]KC[IV]N

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1680 1 2.28e-29 VSCTGSKDCYAPCRKQTGCPNAKCIN KSCKCYGC
1679 1 2.28e-29 VSCTGSKDCYAPCRKQTGCPNAKCIN KSCKCYAC
1678 1 2.28e-29 VSCTGSKDCYAPCRKQTGCPNAKCIN KSCKCAGC
1677 1 2.28e-29 VSCTGSKDCYAPCRKQTGCPNAKCIN KSC
1682 1 1.13e-27 VSCTGSKDCYAPCRQQTGCPNAKCIN KSCKCYGC
1675 1 1.13e-27 VSCTGSKDCYAACRKQTGCANAKCIN KSCKCYGC
1681 1 8.32e-27 VSCTGSKDCYAPCRKQTGCPYGKCMN RKCKCNRC
1676 1 4.07e-26 VSCTGSKDCYAPCRKQTGCPNAACIN KSCKCYGC
1090 1 1.24e-23 IKCTLSKDCYSPCKKETGCPRAKCIN RNCKCYGCS
1102 1 7.17e-22 IRCSGSRDCYSPCMKQTGCPNAKCIN KSCKCYGC
1698 5 4.06e-20 VVIG QRCYRSPDCYSACAKLVGKATGKCTN GRCDC
1697 5 4.06e-20 VVIG QRCYASPDCYSACKKLVGKATGKCTN GRCDC
1696 5 6.69e-20 VVIG QACYRSPDCYSACKKLVGKATGKCTN GRCDC
1699 5 9.67e-20 VVIG QRCYRSPDCYSACKALVGKATGKCTN GRCDC
1596 2 3.60e-19 T ISCTNEKQCYPHCKKETGYPNAKCMN RKCKCFGR
1646 5 7.20e-19 VFIN VKCRGSPECLPKCKEAIGKAAGKCMN
1647 5 1.59e-18 VFIN VKCRGSPECLPKCKEAIGKAAGKCVN
1604 3 3.07e-18 TN VSCTTSKECWSVCQRLHNTSRGKCMN KKCRCYS
1320 2 3.07e-18 N VSCTTSKECWSVCQRLHNTSRGKCMN KKCRCYS
1645 5 4.74e-18 VFIN VKCRGSPECLPKCKEAFGKAAGKCVN
1226 2 4.74e-18 L VKCRGTSDCGRPCQQQTGCPNSKCIN RMCKCYGC
158 1 5.28e-18 ASCRTPKDCADPCRKETGCPYGKCMN RKCKCNRC
980 5 2.29e-17 GFGS LFKFLAKKVAKTVAKQAAKQGAKYIA NKQTE
979 5 2.29e-17 GFGS LFKFLAKKVAKTVAKQAAKQGAKYIA NKQME
981 5 4.66e-17 GFGS LFKFLAKKVAKTVAKQAAKQGAKYVA NKHME
974 5 9.32e-17 GFGA LFKFLAKKVAKTVAKQAAKQGAKYVV NKQME
1674 1 9.93e-16 VSCEDCPEHCSTQKAQAKCDNDKCVC EPI
1673 1 4.52e-15 VSCEDCPDHCSTQKARAKCDNDKCVC EPK
1672 1 4.52e-15 VSCEDCPDHCSTQKARAKCDNDKCVC EPI
1415 5 9.83e-13 QVET NVKCQGGSCASVCRKAIGVAAGKCIN GRCVC
1630 4 1.37e-11 VAC VYRTCDKDCTSRKYRSGKCINNACKC YPY
172 4 5.93e-11 AVC VYRTCDKDCKRRGYRSGKCINNACKC YPYGK

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
158 5.28e-18
172 5.93e-11
974 9.32e-17
979 2.29e-17
980 2.29e-17
981 4.66e-17
1090 1.24e-23
1102 7.17e-22
1226 4.74e-18
1320 3.07e-18
1415 9.83e-13
1596 3.60e-19
1604 3.07e-18
1630 1.37e-11
1645 4.74e-18
1646 7.20e-19
1647 1.59e-18
1672 4.52e-15
1673 4.52e-15
1674 9.93e-16
1675 1.13e-27
1676 4.07e-26
1677 2.28e-29
1678 2.28e-29
1679 2.28e-29
1680 2.28e-29
1681 8.32e-27
1682 1.13e-27
1696 6.69e-20
1697 4.06e-20
1698 4.06e-20
1699 9.67e-20
 
0
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35

Time 61.9 secs.

Motif 13

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Summary

Sequence Logo

E-value 8.7e-198
Width 30
Sites 18
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[VA][TD]E[EA]C[EN]E[YS]CE[DE][ER][EN]K[TH]CCG[LE][ENT][ND]GEP[RV]CA[RN]VC

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1569 2 3.66e-32 T ATEECEEYCEDEEKTCCGEEDGEPVCARFC L
1570 2 1.61e-31