MEME

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use MEME in your research, please cite the following paper:
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.

Discovered Motifs   |   Block diagrams of Motifs   |   Program information   |   Explanation

Discovered Motifs

Motif Overview

Motif 1
  • 1.2e-620
  • 40 sites
Motif 1 Logo
Motif 2
  • 5.8e-554
  • 40 sites
Motif 2 Logo
Motif 3
  • 9.4e-493
  • 40 sites
Motif 3 Logo
Motif 4
  • 1.2e-368
  • 21 sites
Motif 4 Logo
Motif 5
  • 2.4e-369
  • 35 sites
Motif 5 Logo
Motif 6
  • 2.2e-282
  • 29 sites
Motif 6 Logo
Motif 7
  • 2.9e-321
  • 39 sites
Motif 7 Logo
Motif 8
  • 4.8e-296
  • 40 sites
Motif 8 Logo
Motif 9
  • 1.8e-253
  • 39 sites
Motif 9 Logo
Motif 10
  • 8.7e-217
  • 31 sites
Motif 10 Logo
Motif 11
  • 6.1e-242
  • 37 sites
Motif 11 Logo
Motif 12
  • 1.4e-232
  • 32 sites
Motif 12 Logo
Motif 13
  • 4.1e-180
  • 40 sites
Motif 13 Logo
Motif 14
  • 8.4e-181
  • 18 sites
Motif 14 Logo
Motif 15
  • 2.4e-176
  • 37 sites
Motif 15 Logo
Motif 16
  • 6.1e-139
  • 26 sites
Motif 16 Logo
Motif 17
  • 5.6e-140
  • 40 sites
Motif 17 Logo
Motif 18
  • 2.0e-122
  • 16 sites
Motif 18 Logo
Motif 19
  • 1.0e-096
  • 40 sites
Motif 19 Logo
Motif 20
  • 1.3e-104
  • 15 sites
Motif 20 Logo

Further Analysis

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Motif 1

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Summary

Sequence Logo

E-value 1.2e-620
Width 25
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CK[GS][KA]GAKCS[RK]LMYDCC[TS]GSC[RS][SG][GT][KV][CG]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1022 5 3.68e-29 GLPV CKGKGAKCSRLMYDCCTGSCRSGKC TRG
371 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC TRNGLPG
370 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC TRNG
369 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC G
368 1 3.68e-29 CKGKGAKCSRLMYDCCTGSCRSGKC
349 1 3.60e-28 CKGAGAKCSRLMYDCCTGSCRSGKC G
348 1 3.60e-28 CKGAGAKCSRLMYDCCTGSCRSGKC
367 1 8.07e-28 CKGKGAKCSRLMYDCCTGSCRSGAC
351 1 2.85e-27 CKGKGAACSRLMYDCCTGSCRSGKC
366 1 4.51e-27 CKGKGAKCSRLMYDCCTGSCASGKC
359 1 4.51e-27 CKGKGAKCSLLMYDCCTGSCRSGKC
363 1 5.38e-27 CKGKGAKCSRLMFDCCTGSCRSGKC
358 1 5.38e-27 CKGKGAKCSALMYDCCTGSCRSGKC
361 1 7.07e-27 CKGKGAKCSRAMYDCCTGSCRSGKC
180 1 1.22e-26 CAGKGAKCSRLMYDCCTGSCRSGKC
346 1 1.83e-26 CKGAGAACSRLMYDCCTGSCRSGKC
364 1 2.09e-26 CKGKGAKCSRLMYACCTGSCRSGKC
362 1 3.17e-26 CKGKGAKCSRLAYDCCTGSCRSGKC
179 1 6.97e-26 CAGAGAKCSRLMYDCCTGSCRSGKC
347 1 1.49e-25 CKGAGAKCSRLLYDCCTGSCRSGKC
395 1 2.46e-25 CKSKGAKCSKLMYDCCTGSCSGTVG RC
397 1 5.73e-25 CKSKGAKCSRLMYDCCSGSCSGTVG RC
1314 3 6.44e-25 NS CKGAGAKCSRLPYDCCTGSCRSGAC
1270 2 6.44e-25 N CKGAGAKCSRLPYDCCTGSCRSGAC G
350 1 6.44e-25 CKGAGAKCSRLPYDCCTGSCRSGAC
1729 2 1.47e-24 Y CKSKGAKCSKLMYDCCSGSCSGTVG RC
394 1 1.47e-24 CKSKGAKCSKLMYDCCSGSCSGTVG RCY
393 1 1.47e-24 CKSKGAKCSKLMYDCCSGSCSGTVG RC
408 1 2.07e-24 CKYKGAKCSRLMYDCCSGSCSGTVG RC
357 1 2.07e-24 CKGKGAKCRKTSYDCCTGSCRSGKC
392 1 9.77e-24 CKSKGAKCSKLMYDCCSGSCSGAVG RC
398 1 1.50e-23 CKSKGAQCSKLMYDCCSGSCSGTVG RC
377 1 2.07e-23 CKGKGASCSRTMYNCCTGSCNRGKC
399 1 2.55e-23 CKSKGARCSKLMYDCCSGSCSGTVG RC
375 1 5.28e-23 CKGKGASCRKTMYDCCRGSCRSGRC
373 1 1.61e-22 CKGKGAPCTRLMYDCCHGSCSSSKG RC
374 1 5.24e-22 CKGKGASCHRTSYDCCTGSCNRGKC
376 1 2.62e-21 CKGKGASCRRTSYGCCTGSCRSGRC
378 1 5.46e-21 CKGKGQSCSKLMYDCCTGSCSRRGK C
457 1 3.54e-20 CQGRGASCRKTMYNCCSGSCRSGRC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
179 6.97e-26
180 1.22e-26
346 1.83e-26
347 1.49e-25
348 3.60e-28
349 3.60e-28
350 6.44e-25
351 2.85e-27
357 2.07e-24
358 5.38e-27
359 4.51e-27
361 7.07e-27
362 3.17e-26
363 5.38e-27
364 2.09e-26
366 4.51e-27
367 8.07e-28
368 3.68e-29
369 3.68e-29
370 3.68e-29
371 3.68e-29
373 1.61e-22
374 5.24e-22
375 5.28e-23
376 2.62e-21
377 2.07e-23
378 5.46e-21
392 9.77e-24
393 1.47e-24
394 1.47e-24
395 2.46e-25
397 5.73e-25
398 1.50e-23
399 2.55e-23
408 2.07e-24
457 3.54e-20
1022 3.68e-29
1270 6.44e-25
1314 6.44e-25
1729 1.47e-24
 
0
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25
30

Time 9.6 secs.

Motif 2

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Summary

Sequence Logo

E-value 5.8e-554
Width 25
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

T[HPR][PS]GGAC[GN][SG]HY[HQ]CC[SDN]D[FS]C[NDSI]TA[TAS][SRN]TC

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
725 3 1.06e-26 EC THSGGACNSHTQCCDDFCSTATSTC I
722 3 1.34e-26 EC THSGGACNSHDQCCNAFCDTATRTC V
724 3 2.60e-26 EC THSGGACNSHNQCCNAFCDTATRTC V
1592 1 3.21e-26 THSGGACNSHDQCCNAFCSTATRTC V
732 3 8.64e-26 EC TRSGGACNSHTQCCDDFCDTATRTC V
734 3 1.04e-25 EC TRSGGACNSHTQCCDDFCSTATSTC T
733 3 1.04e-25 EC TRSGGACNSHTQCCDDFCSTATSTC I
731 3 1.25e-25 EC TRSGGACNSHDQCCNAFCDTATRTC V
1614 1 1.49e-25 TRSGGACNSHNQCCDDFCSTATSTC V
1613 1 1.49e-25 TRSGGACNSHNQCCDDFCSTATSTC I
736 3 1.49e-25 EC TRSGGACNSHTQCCNAFCDTATRTC V
723 3 1.49e-25 EC THSGGACNSHDQCCNTFCDTATRTC V
495 2 2.50e-25 C THPGGACGGHHHCCSQFCNTAANAC N
721 3 4.79e-25 EC THSGGACNSHDQCCNAFCDTATRAC V
735 3 7.58e-25 EC TRSGGACNSHTQCCDHFCSTATSTC I
924 3 1.57e-24 GC THPGGACGGHHHCCSLFCNTAANAC N
493 2 1.57e-24 C THPGGACGGHHHCCSLFCNTAANAC N
738 3 1.80e-24 EC TRSGGACYSHNQCCDDFCSTATSTC V
737 3 1.80e-24 EC TRSGGACYSHNQCCDDFCSTATSTC I
497 2 2.71e-24 C THPGGACGGHHHCCSQSCNTAATTC N
720 3 3.54e-24 EC TDSGGACNSHDQCCNEFCSTATRTC I
674 3 4.03e-24 EC AHSGGACNSHDQCCNAFCDTATRTC V
1257 6 4.59e-24 MTMGC THPGGACGGHYHCCSQSCNTAANSC N
496 2 4.59e-24 C THPGGACGGHHHCCSQSCNTAANSC N
492 2 7.63e-24 C THPGGACGFYYHCCSNYCITISSTC N
494 2 1.41e-23 C THPGGACGGHHHCCSLSCNTAANAC N
593 3 2.55e-23 DC TPPDGACGFHYHCCSKFCITISSTC N
595 3 3.61e-23 DC TPPGGACGFYYHCCSNYCITISSTC R
594 3 3.61e-23 DC TPPGGACGFYYHCCSNYCITISSTC N
517 2 4.06e-23 C TPSGGACGFYYHCCSNYCITISSTC R
1256 6 5.72e-23 MTMGC THPGGACAGHHHCCSQSCNTAANSC N
506 2 1.25e-22 C TPPDGACGFHYHCCSKFCITVSSTC N
508 2 2.41e-22 C TPPGGACGVYYHCCSNYCITISSTC R
596 3 2.98e-22 DC TPPGGACGFYYHCCSNYCVTISSTC N
498 2 2.98e-22 C THPGGACGGHSHCCSLSCNTAANSC N
927 3 6.93e-22 GC TPPGGACGGHAHCCSQSCNILASTC NA
926 3 7.69e-22 GC TPPGGACGGHAHCCSQSCDILASTC NA
509 2 3.33e-20 C TPPGGSCGGHAHCCSKSCNIMASTC ND
489 2 3.03e-19 C TDPGGACGNPGHCCSKFCITTSSTC N
727 3 6.50e-19 EC TPPGGACNIHPHCCEEFCDMANNRC LEM

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
489 3.03e-19
492 7.63e-24
493 1.57e-24
494 1.41e-23
495 2.50e-25
496 4.59e-24
497 2.71e-24
498 2.98e-22
506 1.25e-22
508 2.41e-22
509 3.33e-20
517 4.06e-23
593 2.55e-23
594 3.61e-23
595 3.61e-23
596 2.98e-22
674 4.03e-24
720 3.54e-24
721 4.79e-25
722 1.34e-26
723 1.49e-25
724 2.60e-26
725 1.06e-26
727 6.50e-19
731 1.25e-25
732 8.64e-26
733 1.04e-25
734 1.04e-25
735 7.58e-25
736 1.49e-25
737 1.80e-24
738 1.80e-24
924 1.57e-24
926 7.69e-22
927 6.93e-22
1256 5.72e-23
1257 4.59e-24
1592 3.21e-26
1613 1.49e-25
1614 1.49e-25
 
0
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30

Time 36.2 secs.

Motif 3

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Summary

Sequence Logo

E-value 9.4e-493
Width 25
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[AK]A[KN][VA]K[YL][SF]L[TV][PV][QE][ES]CC[PS][ND]PPC[FA][AL]T[HN][SMP][DE]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
28 1 1.46e-28 AAKVKYSNTPEECCPNPPCFATHSE ICGVRR
27 1 1.46e-28 AAKVKYSNTPEECCPNPPCFATHSE ICGV
16 1 1.96e-28 AAKVKYSKTPEECCPNPPCFATHSE ICGGRR
15 1 1.96e-28 AAKVKYSKTPEECCPNPPCFATHSE ICG
30 1 2.56e-28 AAKVKYSNTPEECCSNPPCFATHSE ICGGRR
29 1 2.56e-28 AAKVKYSNTPEECCSNPPCFATHSE ICG
22 1 7.42e-28 AAKVKYSLTPAECCPNPPCFAQHSD LCGARR
21 1 7.42e-28 AAKVKYSLTPAECCPNPPCFAQHSD LCGA
31 1 9.61e-28 AAKVKYSNTREECCPNPPCFATHSE ICGGRR
18 1 2.54e-27 AAKVKYSKTPEECCPNPPCFATHSN ICGGRR
17 1 2.54e-27 AAKVKYSKTPEECCPNPPCFATHSN ICG
20 1 3.21e-27 AAKVKYSKTPEECCPNPPCFATNSD ICGGRR
19 1 3.21e-27 AAKVKYSKTPEECCPNPPCFATNSD ICG
32 1 1.23e-26 AAKVKYSNTREECCPNPPCFATNSD ICGGRR
26 1 1.87e-26 AAKVKYSLTPAECCTNPPCFAQHSD LCGARR
25 1 1.87e-26 AAKVKYSLTPAECCTNPPCFAQHSD LCGA
24 1 1.87e-26 AAKVKYSLTPAECCPNPPCFAQHSN LCGARR
23 1 1.87e-26 AAKVKYSLTPAECCPNPPCFAQHSN LCGA
34 1 2.46e-23 AANAKLFAVMQSCCSTPPCALRHMD MCG
33 1 2.46e-23 AANAKLFAVMQSCCSTPPCALRHMD MC
41 1 6.73e-22 AANAKLFDVRQSCCSTPPCALLYME MCG
36 1 6.73e-22 AANAKLFAVMQSCCSTPPRALRHMD MCG
35 1 6.73e-22 AANAKLFAVMQSCCSTPPRALRHMD MC
37 1 7.57e-22 AANAKLFAVRQSCCSTPPCALLYME MCG
42 1 3.17e-20 AANAKLSERLDPCCRDPPCASTHID RCG
43 1 3.89e-20 AANAKLSERLDPCCRDPPCASTHTD ICTRRR
59 5 9.63e-20 AAND KASVQIALTVQECCADSACSLTNPL ICGRR
58 5 9.63e-20 AAND KASVQIALTVQECCADSACSLTNPL IC
44 1 9.63e-20 AANAKLSERLDPCCREPPCASTHID RCG
45 1 1.17e-19 AANAKLSERLDPCCREPPCASTHTD ICTRRR
57 5 1.30e-19 AAND KASVQIALTVQECCADAACSLTNPL ICGRR
56 5 1.30e-19 AAND KASVQIALTVQECCADAACSLTNPL IC
39 1 2.11e-19 AANAKLFDVGQSCCSAPLCALLYMV ICG
38 1 2.11e-19 AANAKLFDVGQSCCSAPLCALLYMV IC
47 5 4.53e-19 AAND KAPVQIVLTVQECCADSACSLTNPL ICGRR
46 5 4.53e-19 AAND KAPVQIVLTVQECCADSACSLTNPL IC
40 1 6.60e-19 AANAKLFDVRQSCCSAPLCALLYRV MCG
62 5 9.32e-17 AANK KASDLMALTVRGCCVYPPCAVNHPD ICG
54 5 9.32e-17 AAND KASDLMALTVRGCCVYPPCAVNHPD ICRGGR
8 6 3.46e-14 AAKFK APALMELTVRDECCSDPRCAVKHQD LCG

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 3.46e-14
15 1.96e-28
16 1.96e-28
17 2.54e-27
18 2.54e-27
19 3.21e-27
20 3.21e-27
21 7.42e-28
22 7.42e-28
23 1.87e-26
24 1.87e-26
25 1.87e-26
26 1.87e-26
27 1.46e-28
28 1.46e-28
29 2.56e-28
30 2.56e-28
31 9.61e-28
32 1.23e-26
33 2.46e-23
34 2.46e-23
35 6.73e-22
36 6.73e-22
37 7.57e-22
38 2.11e-19
39 2.11e-19
40 6.60e-19
41 6.73e-22
42 3.17e-20
43 3.89e-20
44 9.63e-20
45 1.17e-19
46 4.53e-19
47 4.53e-19
54 9.32e-17
56 1.30e-19
57 1.30e-19
58 9.63e-20
59 9.63e-20
62 9.32e-17
 
0
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15
20
25
30
35

Time 45.2 secs.

Motif 4

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Summary

Sequence Logo

E-value 1.2e-368
Width 25
Sites 21
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[RM]CQLSCRSLGLLGKCIGDKCECVKH

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
117 7 5.04e-31 AFCNLR MCQLSCRSLGLLGKCIGDKCECVKH
113 7 5.04e-31 AFCNLL MCQLSCRSLGLLGKCIGDKCECVKH
112 7 5.04e-31 AFCNLK MCQLSCRSLGLLGKCIGDKCECVKH
1619 7 2.22e-30 TVCNLR RCQLSCRSLGLLGKCIGDKCECVKH
166 7 2.22e-30 AVCNLA RCQLSCRSLGLLGKCIGDKCECVKH
121 7 2.22e-30 AFCNLR RCQLSCRSLGLLGKCIGDKCECVKH
114 7 2.22e-30 AFCNLM RCQLSCRSLGLLGKCIGDKCECVKH
1618 7 2.63e-30 TVCNLR MCQLSCRSLGLLGKCIGVKCECVKH
1620 7 4.46e-30 TVCNLR RCQLSCRSLGLLGKCIGVKCECVKH
1589 7 4.46e-30 TFCNLR RCQLSCRSLGLLGKCIGVKCECVKH
171 7 4.46e-30 AVCNLR RCQLSCRSLGLLGKCIGVKCECVKH
115 7 8.68e-30 AFCNLR KCQLSCRSLGLLGKCIGDKCECVKH
116 7 1.33e-29 AFCNLR LCQLSCRSLGLLGKCIGDKCECVKH
168 7 3.31e-29 AVCNLK RCQLSCASLGLLGKCIGDKCECVKH
165 7 3.31e-29 AVCNLA RCQLSCASLGLLGKCIGDKCECVKH
169 7 1.07e-28 AVCNLK RCQLSCRSLGLLGKCIGDKCECVKA
167 7 2.59e-28 AVCNLK RCPLSCRSLGLLGKCIGDKCECVKH
118 7 2.92e-27 AFCNLR MCQLSCRSLGLLGKCMGKKCRCVKH
170 7 3.82e-27 AVCNLK RCQLSCRSLGLLGKCMNGKCECVKH
119 7 6.85e-25 AFCNLR RCELSCRSLGLLGKCIGEECKCVPH
120 7 1.02e-23 AFCNLR RCELSCRSLGLLGKCIGEECKCVPY

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
112 5.04e-31
113 5.04e-31
114 2.22e-30
115 8.68e-30
116 1.33e-29
117 5.04e-31
118 2.92e-27
119 6.85e-25
120 1.02e-23
121 2.22e-30
165 3.31e-29
166 2.22e-30
167 2.59e-28
168 3.31e-29
169 1.07e-28
170 3.82e-27
171 4.46e-30
1589 4.46e-30
1618 2.63e-30
1619 2.22e-30
1620 4.46e-30
 
0
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15
20
25
30

Time 53.7 secs.

Motif 5

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Summary

Sequence Logo

E-value 2.4e-369
Width 25
Sites 35
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AA[NS][DN]KA[ST]DL[MI]AL[TA]VRGCCS[NH]P[PAS]CAG

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
67 1 8.85e-27 AANNKATDLMALTVRGCCDDPSCSI HMPFFCF
66 1 8.85e-27 AANNKATDLMALTVRGCCDDPPCRA RYPFLCI
130 1 1.08e-26 AGNDKATDLMALTVRGCCSHPACAG NNPHICS
129 1 1.08e-26 AGNDKATDLMALTVRGCCSHPACAG NNPHICG
68 1 2.77e-26 AANNKATDLMALTVRGCCGNPSCSI HIPYVCN
64 1 3.33e-26 AANNKATDLMALTVRGCCADPSCSI LMPYFCI
72 1 3.99e-26 AASDKASELMALAVRGCCSHPACAG SNAHICGRRR
71 1 3.99e-26 AASDKASELMALAVRGCCSHPACAG NNPHICGRRR
70 1 3.99e-26 AASDKASELMALAVRGCCSHPACAG NNPDICG
74 1 4.77e-26 AASDKASELMALAVRGCCSNPACAG SNAHICGRRR
65 1 8.08e-26 AANNKATDLMALTVRGCCAHLPCAL MYTACSWGR
73 1 2.63e-24 AASDKASELMALAVRGCCSNLACAG NNLHICGRRR
162 1 3.52e-24 ATNNKATDLMALTVRGCCDDPSCRA ENPFLCSWMG
1567 1 4.07e-24 TANNKATDLMALTVRGCCGNPSCSI HIPYVCN
69 1 1.09e-23 AANNKATDLMARTVRGFCSDPSCRF RNPELCDWRR
63 1 8.09e-22 AANNKATDLMALRYHECCKHPPCRN TRPDLCGGRR
1093 5 4.48e-21 IKNT AASNKASSLVALVVRGCCYNPVCKK YYCWKG
128 1 1.33e-20 AGNAKMSALMALTIRGCCSHPVCSA MSPICG
1539 7 7.87e-20 SNGRNA AADDKPSDWIALAIKQCCANPPCKH VNCR
1092 5 9.13e-19 IKNT AASNKAPSLVAIAVRGCCYNPSCWP KTYCS
7 1 1.33e-18 AADYKRSDWIARVIDSCCSNPPCAH VHCHRRR
53 1 2.55e-18 AANDKASDLMALRGGCCSRPPCILK HPEICGRRR
52 1 2.79e-18 AANDKASDLMALRGGCCSRPPCILE HPEICGRRR
1262 3 3.06e-18 NA AANDKASDVIPLALQGCCSNPVCHV DHPELCL
51 1 3.35e-18 AANDKASDLMALRDGCCSDPACSVN HPDICGGGR
6 1 3.67e-18 AADYKRSDWFAWVIHSCCSNPPCAH VNCRRRR
50 1 4.40e-18 AANDKASDLMALRDGCCSDPACAVN HPDICGGGR
5 1 1.82e-17 AADGKPSDWISLVTPECCSNPPCNL QNCR
4 1 1.82e-17 AADGKPSDWISLVTPECCSNPPCNL QNC
48 1 2.17e-17 AANDKASAWIARTVRQSCCAAPSCF MLC
55 1 3.64e-17 AANDKASNLMALRDECCPNPPCKAS NPDLCDWRS
9 1 3.64e-17 AAKFKAPALMELTVREGCCSDPRCS GKHQDLCS
13 1 5.57e-17 AAKFKAPALMKRTVREACCSDPRCS GQHQEKCG
12 1 1.94e-16 AAKFKAPALMKRTVRDACCSDPRCS GKHQDLCG
774 7 2.43e-15 FDGRNA PADDKASDLIAQIVRRACCSDRRCR WRCG

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
4 1.82e-17
5 1.82e-17
6 3.67e-18
7 1.33e-18
9 3.64e-17
12 1.94e-16
13 5.57e-17
48 2.17e-17
50 4.40e-18
51 3.35e-18
52 2.79e-18
53 2.55e-18
55 3.64e-17
63 8.09e-22
64 3.33e-26
65 8.08e-26
66 8.85e-27
67 8.85e-27
68 2.77e-26
69 1.09e-23
70 3.99e-26
71 3.99e-26
72 3.99e-26
73 2.63e-24
74 4.77e-26
128 1.33e-20
129 1.08e-26
130 1.08e-26
162 3.52e-24
774 2.43e-15
1092 9.13e-19
1093 4.48e-21
1262 3.06e-18
1539 7.87e-20
1567 4.07e-24
 
0
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25
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35

Time 78.1 secs.

Motif 6

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Summary

Sequence Logo

E-value 2.2e-282
Width 25
Sites 29
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

A[GD][SG][GA][PE][CM][EC]FH[RL][PG][YS][TN]CCSG[HWY]CI[IV][WLF]VCA

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1027 11 4.85e-26 GLTRPSKRCL AGSAPCEFHRGYTCCSGHCLIWVCA
411 3 4.85e-26 CL AGSAPCEFHRGYTCCSGHCLIWVCA
1026 11 1.47e-25 GLSRPSKRCI GGGDPCEFHRGYTCCSEHCIIWVCA
1024 11 1.47e-25 GLSRPSKGCI GGGDPCEFHRGYTCCSEHCIIWVCA
333 3 1.47e-25 CI GGGDPCEFHRGYTCCSEHCIIWVCA
1020 11 2.49e-25 GLNRPSKRCL AGSAPCEFHKRSTCCSGHCIIWWCA
410 3 2.49e-25 CL AGSAPCEFHKRSTCCSGHCIIWWCA
1025 11 4.94e-25 GLSRPSKRCI AGGQPCEFHRGYMCCSEHCIIFVCA
329 3 4.94e-25 CI AGGQPCEFHRGYMCCSEHCIIFVCA
1019 11 6.90e-25 GLIRPSKRCI GGGDPCEFHRPYTCCSGYCIVFVCA
334 3 6.90e-25 CI GGGDPCEFHRPYTCCSGYCIVFVCA
1021 11 5.31e-24 GLNRPSKRCL AGSARCEFHKPSTCCSGHCIFWWCA
413 3 5.31e-24 CL AGSARCEFHKPSTCCSGHCIFWWCA
698 4 7.54e-23 ECI EGSEPCEVFRPYTCCSGHCIIFVCA
412 3 7.54e-23 CL AGSARCEFHKPSSCCSGHCIFWWCA
1192 6 5.99e-21 LNKRC IDGGEICDIFFPNCCSGWCIILVCA
330 2 5.99e-21 C IDGGEICDIFFPNCCSGWCIILVCA
1704 3 1.39e-20 WC KQSGEMCNLLDQNCCDGYCIVFVCT
417 2 1.72e-20 C LDAGEMCDLFNSKCCSGWCIILVCA
1705 3 2.33e-20 WC KQSGEMCNLLDQNCCDGYCIVLVCT
1707 3 3.49e-20 WC KQSGEMCNVLDQNCCDGYCIVFVCT
1706 3 5.72e-20 WC KQSGEMCNLLDQNCCEGYCIVLVCT
1193 6 1.13e-19 LNKRC LDGGEICGILFPSCCSGWCIVLVCA
419 2 1.13e-19 C LDGGEICGILFPSCCSGWCIVLVCA
416 2 1.36e-19 C LDAGEMCDLFNSKCCSGWCIILFCA
573 4 1.81e-16 DCI PGGENCDVFRPYRCCSGYCILLLCA
183 2 2.08e-15 C AQSSELCDALDSDCCSGVCMVFFCL
1744 4 4.14e-15 YCV PKSGLCTIFQPGKCCSGWCLIYRCT
84 4 3.22e-12 ACK PKNNLCAITEMAECCSGFCLIYRCS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
84 3.22e-12
183 2.08e-15
329 4.94e-25
330 5.99e-21
333 1.47e-25
334 6.90e-25
410 2.49e-25
411 4.85e-26
412 7.54e-23
413 5.31e-24
416 1.36e-19
417 1.72e-20
419 1.13e-19
573 1.81e-16
698 7.54e-23
1019 6.90e-25
1020 2.49e-25
1021 5.31e-24
1024 1.47e-25
1025 4.94e-25
1026 1.47e-25
1027 4.85e-26
1192 5.99e-21
1193 1.13e-19
1704 1.39e-20
1705 2.33e-20
1706 5.72e-20
1707 3.49e-20
1744 4.14e-15
 
0
5
10
15
20
25
30
35

Time 86 secs.

Motif 7

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Summary

Sequence Logo

E-value 2.9e-321
Width 25
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[PI]P[GS]G[FD][CL][GC]FP[KS][DI][GH][PI][PQ]CCSG[WK]C[FA]FVC[AL]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1216 5 1.19e-23 LRWC IPSGDLCFRSDHIQCCSGKCAFVCL
1745 5 1.39e-23 YDCE PPGNFCGMIKIGPPCCSGWCFFACA
1200 10 1.39e-23 LNTRDDDCE PPGNFCGMIKIGPPCCSGWCFFACA
669 6 1.39e-23 DYDCE PPGNFCGMIKIGPPCCSGWCFFACA
617 6 1.39e-23 DDDCE PPGNFCGMIKIGPPCCSGWCFFACA
606 5 1.39e-23 DDCE PPGNFCGMIKIGPPCCSGWCFFACA
1310 7 1.62e-23 NRLSWC IPSGDLCFPSDHIQCCSAKCAFVCL
1308 7 1.62e-23 NRLSRC IPSGDLCFPSDHIQCCSAKCAFVCL
1312 7 6.14e-23 NRLSWC IPTGDLCFPSDHIQCCSGKCTFVCM
599 4 7.09e-23 DCV AGGHFCGFPKIGGPCCSGWCFFVCA
1309 7 2.49e-22 NRLSWC IPSGDLCFPSDHIQCCNAKCAFVCL
1307 7 2.49e-22 NRLSRC IPSGDLCFPSDHIQCCNAKCAFVCL
1746 5 3.26e-22 YDCE PPGNFCGMIKVGPPCCSGWCFFACA
1215 5 3.26e-22 LRWC IPSGDLCFRSDHIGCCSGKCAFVCL
1311 7 4.27e-22 NRLSWC IPSGDLCFPSDHIRCCSAKCAFVCL
739 5 5.56e-22 EDCE AGGRFCGFPKIGEPCCSGWCFFVCA
1217 5 7.24e-22 LRWC IPSGELCFRSDHIGCCSGKCAFVCL
1639 4 1.78e-21 VCV DGGTFCGFPKIGGPCCSGWCIFVCL
1305 7 5.42e-21 NRLSRC IPSGDLCFPSDHIQCCNAECAFVCL
1214 5 5.42e-21 LRWC IPRGDLCFPSDRIQCCSGKCTFVCM
467 3 1.41e-20 CR PPGMVCGFPKPGPYCCSGWCFAVCL PV
619 6 2.52e-20 DDECE PPGDFCGFFKIGPPCCSGWCFLWCA
466 3 2.30e-19 CR PGGMICGFPKPGPYCCSGWCFVVCL
1367 5 5.93e-19 QDCA AGGQFCGFPKIGGPCCSGWCLGVCA
585 4 1.64e-18 DCQ DSGVVCGFPKPEPHCCSGWCLFVCA
1213 5 5.33e-18 LRGC VPSGEICYFMDHIGCCSGKCTFVCM
1191 10 2.40e-17 LNKKGDDCL AVKKNCGFPKLGGPCCSGLCFFVCA
600 4 1.52e-15 DCV KAGTACGFPKPEPACCSSWCIFVCT
1360 3 3.98e-15 QC RVEGEICGMLFEAQCCDGWCFFVCM
1198 8 6.88e-15 LNQRDCL SKNAFCAWPILGPLCCSGWCLYVCM
740 5 1.38e-14 EDCI AVGQLCVFWNIGRPCCSGLCVFACT VKLP
923 3 2.17e-14 GC REGGEFCGTLYEERCCSGWCFFVCV
336 3 5.28e-14 CI PDHHGCGLLHHSRYCCNGTCFFVCI P
914 4 5.68e-14 GCL DPGYFCGTPFLGAYCCGGICLIVCI ET
1683 9 8.78e-14 VSDRLRWC VPSGEVCRRYEFVGCCSGKCFFVCS
1637 5 8.76e-13 VCIA DDMPCGFGLFGGPLCCSGWCLFVCL
1199 8 2.70e-12 LNQSDCL PRDTFCALPQLGLLCCSGRCLLFCV
1269 4 1.33e-11 NCI PKNHFCGLLHHSRNCCTPTCLIVCF
460 3 1.37e-10 CQ RANFVCDAFHHAAVCCEGVCVLVCA W

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
336 5.28e-14
460 1.37e-10
466 2.30e-19
467 1.41e-20
585 1.64e-18
599 7.09e-23
600 1.52e-15
606 1.39e-23
617 1.39e-23
619 2.52e-20
669 1.39e-23
739 5.56e-22
740 1.38e-14
914 5.68e-14
923 2.17e-14
1191 2.40e-17
1198 6.88e-15
1199 2.70e-12
1200 1.39e-23
1213 5.33e-18
1214 5.42e-21
1215 3.26e-22
1216 1.19e-23
1217 7.24e-22
1269 1.33e-11
1305 5.42e-21
1307 2.49e-22
1308 1.62e-23
1309 2.49e-22
1310 1.62e-23
1311 4.27e-22
1312 6.14e-23
1360 3.98e-15
1367 5.93e-19
1637 8.76e-13
1639 1.78e-21
1683 8.78e-14
1745 1.39e-23
1746 3.26e-22
 
0
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25
30

Time 93.8 secs.

Motif 8

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Summary

Sequence Logo

E-value 4.8e-296
Width 25
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

TP[PR]GG[AY]CY[YA]H[YS]HCCS[LN][FA]CN[LK]A[TI][KN][RKV]C

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
503 2 1.15e-21 C TPAGGACDATTECCILFCNLATKKC QVPTFP
486 2 4.68e-21 C TAPGGACYAAYTCCSNACNLNTKKC VLS
516 2 5.36e-21 C TPRNGYCYYRYFCCSRACNLTIKRC L
1363 3 7.03e-21 QC TPVGGSCSRHYHCCSLYCNKNIGQC LATSYP
500 2 2.02e-20 C TPAGDACDATTECCILFCNLATKKC QVPTFP
502 2 2.61e-20 C TPAGDACDATTNCCILFCNLATKKC EVPTFP
1366 3 5.55e-20 QC TPVGGYCSRHYHCCSNHCIKSIGRC VAH
1638 3 9.07e-20 VC TPPEGYCTYHRDCCDLYCNKTTNVC LET
487 2 1.16e-19 C TAPGGACYADNTCCSNACNLNTKKC VLS
525 2 1.30e-19 C TSPGGACYSASTCCSKACNLTTKRC VLS
499 2 1.47e-19 C TPAGDACDATTECCILFCNLATKEC QVPAFP
1365 3 3.76e-19 QC TPVGGYCSRHHHCCSNHCIKSIGRC VAH
518 2 3.76e-19 C TPSGGACYVASTCCSNACNLNSNKC V
519 2 5.31e-19 C TPSGGACYYDYFCCSMTCNFNSKSC V
512 2 9.34e-19 C TPPSGYCYHPYYCCSRACNLTRKRC L
1364 3 1.17e-18 QC TPVGGYCFDHHHCCSNHCIKSIGRC VAH
928 3 1.17e-18 GC TPRNGACGYHSHCCSNFCHTWANVC L
515 2 1.30e-18 C TPRNGVCFYSYFCCSRACNPSTKRC L
501 2 2.25e-18 C TPAGDACDATTKCCIPFCNLATKKC QVPTFP
511 2 2.51e-18 C TPPGGYCYHPDPCCSQYCNFPRKHC L
514 2 5.28e-18 C TPRHGVCFYSYFCCSKACNPSSKRC L
513 2 5.28e-18 C TPRHGVCFYSYFCCSKACNPSSKRC H
504 2 1.81e-17 C TPAGKACDATATCCVLFCNLVTNKC QVPRFP
510 2 2.00e-17 C TPPGGYCYHPDPCCSQVCNFPRKHC L
728 3 2.98e-17 EC TPPGGACYYHSQCCGDFCQRYINSC L
505 2 4.42e-17 C TPGGEACDATTNCCFLTCNLATNKC RSPNFP
449 2 4.42e-17 C NDPGGSCTRHYHCCQLYCNKQESVC LENEPAF
521 2 5.36e-17 C TQTNGACYHRDTCCSKSCNLTINRC LAS
1361 3 6.50e-17 QC SPNGGSCSRHYHCCSLWCNKDSGVC VATSYP
1612 1 7.16e-17 TRSGGACNSHDQCCINFCRKATSTC M
930 3 3.50e-16 GC TPRNGFCRYHSHCCSNFCHTWAIMC L
730 3 4.59e-16 EC TRSGGACNSHDQCCANFCRKATSTC M
729 3 1.58e-15 EC TRPGGACYYDSHCCRHVCHEVFNTC M
453 2 1.72e-15 C NNRGGGCSQHPHCCSGTCNKTFGVC L
718 3 2.22e-15 EC SSPDESCTYHYNCCQLYCNKEENVC LENSPEV
726 3 2.42e-15 EC TPPEGACNHPSHCCEDFCDRGRNRC M
452 2 4.37e-15 C NNRGGGCSQHPHCCSGTCNKIFGVC L
1579 3 7.15e-14 TC NTPTQYCTLHRHCCSLYCHKTIHAC A
763 8 1.04e-13 FAVIFTC TPPGSHCTGHSDCCSDFCSTMSDVC Q
524 2 2.04e-13 C TSPDGACNTPPQCCSKYCISISTTC N

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
449 4.42e-17
452 4.37e-15
453 1.72e-15
486 4.68e-21
487 1.16e-19
499 1.47e-19
500 2.02e-20
501 2.25e-18
502 2.61e-20
503 1.15e-21
504 1.81e-17
505 4.42e-17
510 2.00e-17
511 2.51e-18
512 9.34e-19
513 5.28e-18
514 5.28e-18
515 1.30e-18
516 5.36e-21
518 3.76e-19
519 5.31e-19
521 5.36e-17
524 2.04e-13
525 1.30e-19
718 2.22e-15
726 2.42e-15
728 2.98e-17
729 1.58e-15
730 4.59e-16
763 1.04e-13
928 1.17e-18
930 3.50e-16
1361 6.50e-17
1363 7.03e-21
1364 1.17e-18
1365 3.76e-19
1366 5.55e-20
1579 7.15e-14
1612 7.16e-17
1638 9.07e-20
 
0
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20
25
30

Time 116.3 secs.

Motif 9

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Summary

Sequence Logo

E-value 1.8e-253
Width 25
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

C[LS]NAGEFC[GDN][IV]F[PF][GPQ][LN]CC[SG][GEY][CF]C[LF][LF][FVW]C[IL]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
647 3 4.94e-21 DG CYNAGTFCGIRPGLCCSEFCFLWCI TFVDS
1194 5 7.92e-21 LNKR CLEFGEVCNFFFPTCCGYCVLLVCL
746 3 7.92e-21 EG CSSGGTFCGIHPGLCCSEFCFLWCI TFID
645 3 7.92e-21 DG CSSGGTFCGIHPGLCCSEFCFLWCI TFID
420 1 1.26e-20 CLEFGELCNFFFPTCCGYCVLLVCL
670 3 1.97e-20 EA CYNAGSFCGIHPGLCCSEFCILWCI TFVDS
1754 3 3.08e-20 YG CSNAGAFCGIHPGLCCSELCLVWCT
418 1 5.48e-20 CLDAGEVCDIFFPTCCGYCILLFCA
646 3 9.61e-20 DG CSSGGTFCGIRPGLCCSEFCFLWCI TFID
644 3 1.10e-19 DG CSNAGGFCGIHPGLCCSEICLVWCT
643 3 1.27e-19 DG CSNAGAFCGIHPGLCCSEICIVWCT
1753 3 1.45e-19 YG CSNAGAFCGIHPGLCCSELCLGWCT
427 1 1.45e-19 CLGFGEVCNFFFPNCCSYCVALVCL
428 1 2.49e-19 CLGGGEVCDIFFPQCCGYCILLFCT
1195 5 2.84e-19 LNKR CQEFGEVCNFFFPDCCGYCVLLLCI
415 1 1.32e-18 CLDAGEICDFFFPTCCGYCILLFCA
387 1 1.69e-18 CKQAGESCDIFSQNCCVGTCAFICI E
344 1 3.08e-18 CKAENELCNIFIQNCCDGTCLLICI QNPQ
529 1 5.55e-18 CVDPGEFCGPGFGDCCTGFCLLVCI
345 1 2.67e-17 CKAESEACNIITQNCCDGKCLFFCI QIPE
328 1 7.71e-17 CIAESEPCNIITQNCCDGKCLFFCI QIPE
438 1 1.42e-16 CLSGGEVCDFLFPKCCNYCILLFCS
384 1 1.93e-16 CKQADEPCDVFSLDCCTGICLGVCM W
385 1 2.13e-16 CKQADEPCDVFSLECCTGICLGFCT W
386 1 3.16e-16 CKQADESCNVFSLDCCTGLCLGFCV S
634 3 5.63e-16 DE CSAPGAFCLIRPGLCCSEFCFFACF
409 1 5.63e-16 CLAEHETCNIFTQNCCEGVCIFICV QAPE
425 1 2.71e-15 CLGFGEACLMLYSDCCSYCVALVCL
543 1 5.50e-15 CYGFGEACLVLYTDCCGYCVLAVCL
709 2 6.00e-15 E CRQPGEFCFPVVAKCCGGTCLVICI
530 1 1.09e-14 CVEDGDFCGPGYEECCSGFCLYVCI
465 1 1.81e-14 CRLGAESCDVISQNCCQGTCVFFCL P
421 1 5.65e-14 CLEKGVLCDPSAGNCCSGECVLVCL
455 1 8.38e-14 CPNTGELCDVVEQNCCYTYCFIVVC PI
454 1 8.38e-14 CPNTGELCDVVEQNCCYTYCFIVVC L
535 1 3.07e-13 CVPYEGPCNWLTQNCCDELCVFFCL
1196 7 5.15e-13 LNKRII CFPDYMFCGVNVFLCCSGNCLLICV P
520 1 5.54e-13 CTQSGELCDVIDPDCCNNFCIIFFC I
717 2 3.96e-12 E CSESGEWCGLDPALCCGSSCFFTCN

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
328 7.71e-17
344 3.08e-18
345 2.67e-17
384 1.93e-16
385 2.13e-16
386 3.16e-16
387 1.69e-18
409 5.63e-16
415 1.32e-18
418 5.48e-20
420 1.26e-20
421 5.65e-14
425 2.71e-15
427 1.45e-19
428 2.49e-19
438 1.42e-16
454 8.38e-14
455 8.38e-14
465 1.81e-14
520 5.54e-13
529 5.55e-18
530 1.09e-14
535 3.07e-13
543 5.50e-15
634 5.63e-16
643 1.27e-19
644 1.10e-19
645 7.92e-21
646 9.61e-20
647 4.94e-21
670 1.97e-20
709 6.00e-15
717 3.96e-12
746 7.92e-21
1194 7.92e-21
1195 2.84e-19
1196 5.15e-13
1753 1.45e-19
1754 3.08e-20
 
0
5
10
15
20
25
30

Time 137.4 secs.

Motif 10

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Summary

Sequence Logo

E-value 8.7e-217
Width 25
Sites 31
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

C[QR]K[WL][MFL][WG][GT]C[DK][ST]ER[DK]CC[EK][GHD]LVC[RK]LWCK

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1738 2 7.83e-30 Y CQKWMWTCDSERKCCEGMVCRLWCK KKLW
1736 2 1.35e-29 Y CQKWMWTCDEERKCCEGLVCRLWCK RIINM
1735 2 1.35e-29 Y CQKWMWTCDEERKCCEGLVCRLWCK KKIEW
1734 2 1.35e-29 Y CQKWMWTCDEERKCCEGLVCRLWCK KKIEEG
1733 2 2.58e-28 Y CQKWLWTCDSERKCCEDMVCRLWCK KRL
1737 2 1.20e-27 Y CQKWMWTCDSARKCCEGLVCRLWCK KII
1739 2 1.82e-27 Y CQKWMWTCDSERKCCEGYVCELWCK YNL
1740 2 2.35e-26 Y CQKWMWTCDSKRKCCEDMVCQLWCK KRL
1732 2 2.35e-26 Y CQKFLWTCDTERKCCEDMVCELWCK YKE
1731 2 2.35e-26 Y CQKFLWTCDTERKCCEDMVCELWCK LEK
1730 2 6.60e-25 Y CQFKMWTCDSERKCCEDMVCRLWCK LNL
608 3 2.29e-21 DD CGKLFSGCDTNADCCEGYVCRLWCK LDW
607 3 1.45e-19 DD CGGLFSGCDSNADCCEGYVCRLWCK YKL
609 3 3.21e-19 DD CGTLFSGCDTSKDCCEGYVCHLWCK YK
714 2 9.75e-19 E CRYLFGGCKTTSDCCKHLGCKFRDK YCAWDFTFS
713 2 9.75e-19 E CRYLFGGCKTTADCCKHLGCKFRDK YCAWDFTFS
715 2 1.87e-18 E CRYLFGGCSSTSDCCKHLSCRSDWK YCAWDGTFS
1581 2 2.04e-17 T CRYLFGGCKTTADCCKHLACRSDGK YCAWDGTF
696 2 2.49e-17 E CGKFMWKCKNSNDCCKDLVCSSRWK WCVLASPF
1522 3 1.31e-16 SE CRWFMGGCDSTLDCCKHLSCKMGLY YCAWDGTF
788 3 1.59e-16 GA CRWFLGGCKSTSDCCEHLSCKMGLD YCAWDGTF
697 2 3.36e-16 E CGTLFSGCSTHADCCEGFICKLWCR YERTW
708 2 4.87e-16 E CRKMFGGCSVDSDCCAHLGCKPTLK YCAWDGT
711 2 3.20e-15 E CRWYLGGCKEDSECCEHLQCHSYWE WCLWDGSF
597 2 1.68e-13 D CTRMFGACRRDSDCCPHLGCKPTSK YCAWDGTI
716 2 2.29e-13 E CRYWLGGCSAGQTCCKHLVCSRRHG WCVWDGTFS
1251 3 1.44e-10 MP CPKILKQCKSDEDCCRGWKCFGFSI KDKMCISR
601 2 1.16e-09 D CWPQYWFCGLQRGCCPGTTCFFLCF
1542 8 1.55e-08 SNKRKNA AMLDMIAQHAIRGCCSDPRCRYRCR
89 2 1.83e-08 A CSRAGENCYKSGRCCDGLYCKAYVV TCYKP
531 1 2.51e-08 CVKYLDPCDMLRHTCCFGLCVLIAC I

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
89 1.83e-08
531 2.51e-08
597 1.68e-13
601 1.16e-09
607 1.45e-19
608 2.29e-21
609 3.21e-19
696 2.49e-17
697 3.36e-16
708 4.87e-16
711 3.20e-15
713 9.75e-19
714 9.75e-19
715 1.87e-18
716 2.29e-13
788 1.59e-16
1251 1.44e-10
1522 1.31e-16
1542 1.55e-08
1581 2.04e-17
1730 6.60e-25
1731 2.35e-26
1732 2.35e-26
1733 2.58e-28
1734 1.35e-29
1735 1.35e-29
1736 1.35e-29
1737 1.20e-27
1738 7.83e-30
1739 1.82e-27
1740 2.35e-26
 
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35

Time 158.4 secs.

Motif 11

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Summary

Sequence Logo

E-value 6.1e-242
Width 25
Sites 37
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CK[SG][PK]GA[SK]C[SR][KRP][TL][MS]Y[DN]CCSG[SC]CS[RG][TGS]R[CK]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
389 1 1.00e-23 CKSKGAKCDRLMYDCCSGSCSGTVG RC
388 1 1.00e-23 CKSKGAKCDKLMYDCCSGSCSGTVG RC
470 1 5.86e-23 CRSKGAKCSKLMYDCCSGSCSGTVG RC
396 1 5.86e-23 CKSKGAKCSRLLYDCCSGSCSGTVG RC
391 1 5.86e-23 CKSKGAKCSKLLYDCCSGSCSGTVG RC
390 1 1.02e-22 CKSKGAKCSKLAYDCCSGSCSGTVG RC
1607 3 5.94e-22 TR CKGKGAPCRKTMYDCCSGSCGRRGK CG
372 1 5.94e-22 CKGKGAPCRKTMYDCCSGSCGRRGK C
382 1 8.31e-22 CKLKGQSCSRLMYDCCSGSCGRSGK C
407 1 1.61e-21 CKYKGAKCSRLLYDCCSGSCSGTVG RC
1552 4 2.60e-21 STR CQGRGASCRKTMYNCCSGSCNRGRC G
456 1 2.60e-21 CQGRGASCRKTMYNCCSGSCNRGRC
381 1 1.21e-20 CKLKGQSCRKTSYDCCSGSCGRSGK C
405 1 1.88e-20 CKSTGASCRRTSYDCCTGSCDRGRC
379 1 2.18e-20 CKGPGAKCLKTMYDCCKYSCSRGRC
459 1 1.54e-19 CQGRGASCRRTSYDCCTGSCRSGRC
458 1 1.54e-19 CQGRGASCRKTSYDCCTGSCRSGRC
404 1 3.41e-19 CKSTGASCRRTPYDCCTGSCRSGRC
441 1 6.55e-18 CLSPGSSCSRLMYNCCRSCNPYSRK CR
440 1 1.04e-16 CLSPGSSCSPTSYNCCRSCNPYSRK CR
439 1 1.04e-16 CLSPGSSCSPTSYNCCRSCNPYSRK C
401 1 1.16e-16 CKSPGSSCSPTSYNCCRSCNPYTKR CY
403 1 2.39e-16 CKSPGTPCSRGMRDCCTSCLSYSNK CRRY
380 1 2.39e-16 CKGPGASCIRIAYNCCKYSCRNGKC S
402 1 7.93e-16 CKSPGTPCSRGMRDCCTSCLLYSNK CRRY
343 1 7.93e-16 CKAAGKSCSRIAYNCCTGSCRSGKC
1328 2 2.76e-15 P CKTPGRKCFPHQKDCCGRACIITIC P
1327 2 4.00e-15 P CKKTGRKCFPHQKDCCGRACIITIC P
1326 2 1.55e-14 P CKKSGRKCFPHQKDCCGRACIITIC P
164 7 1.69e-14 ATSNRP CKPKGRKCFPHQKDCCNKTCTRSKC P
383 1 5.20e-14 CKPPGSPCRVSSYNCCSSCKSYNKK CG
463 1 2.92e-13 CRIPNQKCFQHLDDCCSRKCNRFNK CV
699 2 2.79e-11 E CKGFGKSCVPGKNECCSGYACNSRD KWCKVLL
478 1 8.13e-11 CSNFGSDCIPATHDCCSGECFGFED MGLCT
1418 6 2.27e-10 QVSWW CGKPEATCGKLYLKCCSGMCNKANW KCL
313 1 3.31e-10 CDAPNAPCEKFDNDCCDACMLREKQ QPICAV
426 1 8.30e-10 CLGFGEACLMLYSDCCSYCVGAVCL

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
164 1.69e-14
313 3.31e-10
343 7.93e-16
372 5.94e-22
379 2.18e-20
380 2.39e-16
381 1.21e-20
382 8.31e-22
383 5.20e-14
388 1.00e-23
389 1.00e-23
390 1.02e-22
391 5.86e-23
396 5.86e-23
401 1.16e-16
402 7.93e-16
403 2.39e-16
404 3.41e-19
405 1.88e-20
407 1.61e-21
426 8.30e-10
439 1.04e-16
440 1.04e-16
441 6.55e-18
456 2.60e-21
458 1.54e-19
459 1.54e-19
463 2.92e-13
470 5.86e-23
478 8.13e-11
699 2.79e-11
1326 1.55e-14
1327 4.00e-15
1328 2.76e-15
1418 2.27e-10
1552 2.60e-21
1607 5.94e-22
 
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Time 179.7 secs.

Motif 12

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Summary

Sequence Logo

E-value 1.4e-232
Width 25
Sites 32
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

VSCTGS[KP]DCY[SA][PT]C[KR]KQ[TA]G[CK][PA]N[AG]KC[IV]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1680 1 5.04e-28 VSCTGSKDCYAPCRKQTGCPNAKCI NKSCKCYGC
1679 1 5.04e-28 VSCTGSKDCYAPCRKQTGCPNAKCI NKSCKCYAC
1678 1 5.04e-28 VSCTGSKDCYAPCRKQTGCPNAKCI NKSCKCAGC
1677 1 5.04e-28 VSCTGSKDCYAPCRKQTGCPNAKCI NKSC
1682 1 2.48e-26 VSCTGSKDCYAPCRQQTGCPNAKCI NKSCKCYGC
1675 1 2.48e-26 VSCTGSKDCYAACRKQTGCANAKCI NKSCKCYGC
1681 1 1.83e-25 VSCTGSKDCYAPCRKQTGCPYGKCM NRKCKCNRC
1676 1 8.89e-25 VSCTGSKDCYAPCRKQTGCPNAACI NKSCKCYGC
1090 1 2.59e-22 IKCTLSKDCYSPCKKETGCPRAKCI NRNCKCYGCS
1102 1 1.41e-20 IRCSGSRDCYSPCMKQTGCPNAKCI NKSCKCYGC
1698 5 7.35e-19 VVIG QRCYRSPDCYSACAKLVGKATGKCT NGRCDC
1697 5 7.35e-19 VVIG QRCYASPDCYSACKKLVGKATGKCT NGRCDC
1696 5 1.20e-18 VVIG QACYRSPDCYSACKKLVGKATGKCT NGRCDC
1699 5 1.71e-18 VVIG QRCYRSPDCYSACKALVGKATGKCT NGRCDC
1596 2 6.17e-18 T ISCTNEKQCYPHCKKETGYPNAKCM NRKCKCFGR
1646 5 1.21e-17 VFIN VKCRGSPECLPKCKEAIGKAAGKCM N
1647 5 2.62e-17 VFIN VKCRGSPECLPKCKEAIGKAAGKCV N
980 5 4.48e-17 GFGS LFKFLAKKVAKTVAKQAAKQGAKYI ANKQTE
979 5 4.48e-17 GFGS LFKFLAKKVAKTVAKQAAKQGAKYI ANKQME
1604 3 4.98e-17 TN VSCTTSKECWSVCQRLHNTSRGKCM NKKCRCYS
1320 2 4.98e-17 N VSCTTSKECWSVCQRLHNTSRGKCM NKKCRCYS
1645 5 7.59e-17 VFIN VKCRGSPECLPKCKEAFGKAAGKCV N
1226 2 7.59e-17 L VKCRGTSDCGRPCQQQTGCPNSKCI NRMCKCYGC
158 1 8.42e-17 ASCRTPKDCADPCRKETGCPYGKCM NRKCKCNRC
981 5 9.34e-17 GFGS LFKFLAKKVAKTVAKQAAKQGAKYV ANKHME
974 5 9.34e-17 GFGA LFKFLAKKVAKTVAKQAAKQGAKYV VNKQME
1674 1 9.31e-16 VSCEDCPEHCSTQKAQAKCDNDKCV CEPI
1673 1 4.58e-15 VSCEDCPDHCSTQKARAKCDNDKCV CEPK
1672 1 4.58e-15 VSCEDCPDHCSTQKARAKCDNDKCV CEPI
1415 5 1.04e-11 QVET NVKCQGGSCASVCRKAIGVAAGKCI NGRCVC
1630 4 1.84e-11 VAC VYRTCDKDCTSRKYRSGKCINNACK CYPY
172 4 8.23e-11 AVC VYRTCDKDCKRRGYRSGKCINNACK CYPYGK

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
158 8.42e-17
172 8.23e-11
974 9.34e-17
979 4.48e-17
980 4.48e-17
981 9.34e-17
1090 2.59e-22
1102 1.41e-20
1226 7.59e-17
1320 4.98e-17
1415 1.04e-11
1596 6.17e-18
1604 4.98e-17
1630 1.84e-11
1645 7.59e-17
1646 1.21e-17
1647 2.62e-17
1672 4.58e-15
1673 4.58e-15
1674 9.31e-16
1675 2.48e-26
1676 8.89e-25
1677 5.04e-28
1678 5.04e-28
1679 5.04e-28
1680 5.04e-28
1681 1.83e-25
1682 2.48e-26
1696 1.20e-18
1697 7.35e-19
1698 7.35e-19
1699 1.71e-18
 
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35

Time 187 secs.

Motif 13

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Summary

Sequence Logo

E-value 4.1e-180
Width 23
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

C[LR][DG]SG[ET]QCTSDS[QSE]CCSGSC[TI]NN[IV]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
430 1 1.73e-22 CLGSGEQCVRDTSCCSMSCTNNI CF
423 1 5.58e-21 CLFSGEYCWLDTSCCSKSCTNNV CF
431 1 7.13e-21 CLGSGETCWLDSSCCSFSCTNNV CF
429 1 1.46e-20 CLGSGELCVRDTSCCSMSCTNNI CF
414 1 4.62e-20 CLASGETCWRDTSCCSFSCTNNV CF
434 1 5.77e-20 CLGSREQCVRDTSCCSMSCTNNI CF
433 1 5.77e-20 CLGSREQCVRDTSCCSMSCTNNI CC
442 1 3.18e-19 CLTTGETCWLASSCCSFSCTNNI CF
446 1 3.90e-19 CLTTGEYCWLASSCCSYSCTNNV CF
443 1 3.90e-19 CLTTGETCWLASSCCSFSCTNNV CF
432 1 1.87e-18 CLGSRELCVRDTSCCSMSCTNNI CF
445 1 2.30e-17 CLTTGEYCWLASSCCSYSCTDNV CF
122 3 4.47e-17 AF CRFNGQQCTSDGQCCNGRCINAF QGRICIG
542 1 1.17e-16 CYDSGTSCNTGNQCCSGWCIFVS CL
541 1 1.37e-16 CYDSGTSCNTGNQCCSGWCIFVC L
1643 3 2.18e-16 VF CRFNGQQCTSDGQCCYGKCRTAF MGKICM
1642 3 2.18e-16 VF CRFNGQQCTSDGQCCYGKCRTAF LRMICMGG
537 1 2.18e-16 CYDGGTGCDSGNQCCSGWCIFVC L
536 1 2.95e-16 CYDGGTGCDSGNQCCSGWCIFAC L
539 1 3.97e-16 CYDGGTSCDSGIQCCSGWCIFVC L
538 1 3.97e-16 CYDGGTSCDSGIQCCSGWCIFVC F
1644 3 8.24e-16 VF CRSNGQQCTSDGQCCYGKCMTAF MGKICMR
540 1 4.32e-15 CYDGGTSCNTGNQCCSGWCIFLC L
111 3 4.32e-15 AF CKYNGEQCTSDGQCCNGRCRTAF MGKICMG
1448 2 2.07e-13 R CDEEGTGCSSDSECCSGRCTPEG LFEFCE
461 1 6.75e-13 CRAEGTYCENDSQCCLNECCWGG CGHPCRHP
1576 2 2.77e-12 T CKQKGEGCSLDVECCSSSCKPGG PLFDFDC
145 3 3.05e-12 AP CTYPGQQCKSDDECCHGTCKTAF IGRICMR
472 1 4.93e-12