MEME

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use MEME in your research, please cite the following paper:
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.

Discovered Motifs   |   Block diagrams of Motifs   |   Program information   |   Explanation

Discovered Motifs

Motif Overview

Motif 1
  • 2.0e-529
  • 40 sites
Motif 1 Logo
Motif 2
  • 7.6e-417
  • 40 sites
Motif 2 Logo
Motif 3
  • 2.7e-402
  • 40 sites
Motif 3 Logo
Motif 4
  • 4.4e-360
  • 38 sites
Motif 4 Logo
Motif 5
  • 1.5e-276
  • 21 sites
Motif 5 Logo
Motif 6
  • 5.3e-335
  • 40 sites
Motif 6 Logo
Motif 7
  • 8.4e-268
  • 40 sites
Motif 7 Logo
Motif 8
  • 1.9e-226
  • 28 sites
Motif 8 Logo
Motif 9
  • 3.4e-216
  • 40 sites
Motif 9 Logo
Motif 10
  • 3.6e-223
  • 40 sites
Motif 10 Logo
Motif 11
  • 2.2e-192
  • 40 sites
Motif 11 Logo
Motif 12
  • 1.8e-199
  • 39 sites
Motif 12 Logo
Motif 13
  • 1.6e-190
  • 26 sites
Motif 13 Logo
Motif 14
  • 5.1e-180
  • 24 sites
Motif 14 Logo
Motif 15
  • 2.6e-151
  • 19 sites
Motif 15 Logo
Motif 16
  • 9.0e-147
  • 35 sites
Motif 16 Logo
Motif 17
  • 8.7e-164
  • 35 sites
Motif 17 Logo
Motif 18
  • 2.2e-141
  • 40 sites
Motif 18 Logo
Motif 19
  • 6.0e-124
  • 33 sites
Motif 19 Logo
Motif 20
  • 1.1e-118
  • 39 sites
Motif 20 Logo

Further Analysis

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Motif 1

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Summary

Sequence Logo

E-value 2.0e-529
Width 20
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

K[GS]KGAKCS[RK]LMYDCC[TS]GSC[RS]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1022 6 3.21e-24 GLPVC KGKGAKCSRLMYDCCTGSCR SGKCTRG
371 2 3.21e-24 C KGKGAKCSRLMYDCCTGSCR SGKCTRNGLP
370 2 3.21e-24 C KGKGAKCSRLMYDCCTGSCR SGKCTRNG
369 2 3.21e-24 C KGKGAKCSRLMYDCCTGSCR SGKCG
368 2 3.21e-24 C KGKGAKCSRLMYDCCTGSCR SGKC
367 2 3.21e-24 C KGKGAKCSRLMYDCCTGSCR SGAC
349 2 3.86e-23 C KGAGAKCSRLMYDCCTGSCR SGKCG
348 2 3.86e-23 C KGAGAKCSRLMYDCCTGSCR SGKC
395 2 4.96e-23 C KSKGAKCSKLMYDCCTGSCS GTVGRC
397 2 7.22e-23 C KSKGAKCSRLMYDCCSGSCS GTVGRC
366 2 1.29e-22 C KGKGAKCSRLMYDCCTGSCA SGKC
1729 3 1.43e-22 YC KSKGAKCSKLMYDCCSGSCS GTVGRC
394 2 1.43e-22 C KSKGAKCSKLMYDCCSGSCS GTVGRCY
393 2 1.43e-22 C KSKGAKCSKLMYDCCSGSCS GTVGRC
392 2 1.43e-22 C KSKGAKCSKLMYDCCSGSCS GAVGRC
359 2 1.57e-22 C KGKGAKCSLLMYDCCTGSCR SGKC
408 2 1.98e-22 C KYKGAKCSRLMYDCCSGSCS GTVGRC
363 2 1.98e-22 C KGKGAKCSRLMFDCCTGSCR SGKC
358 2 1.98e-22 C KGKGAKCSALMYDCCTGSCR SGKC
351 2 2.47e-22 C KGKGAACSRLMYDCCTGSCR SGKC
361 2 3.05e-22 C KGKGAKCSRAMYDCCTGSCR SGKC
364 2 6.53e-22 C KGKGAKCSRLMYACCTGSCR SGKC
389 2 1.21e-21 C KSKGAKCDRLMYDCCSGSCS GTVGRC
362 2 1.53e-21 C KGKGAKCSRLAYDCCTGSCR SGKC
347 2 1.53e-21 C KGAGAKCSRLLYDCCTGSCR SGKC
346 2 1.53e-21 C KGAGAACSRLMYDCCTGSCR SGKC
396 2 2.82e-21 C KSKGAKCSRLLYDCCSGSCS GTVGRC
388 2 2.82e-21 C KSKGAKCDKLMYDCCSGSCS GTVGRC
1314 4 3.91e-21 NSC KGAGAKCSRLPYDCCTGSCR SGAC
1270 3 3.91e-21 NC KGAGAKCSRLPYDCCTGSCR SGACG
399 2 3.91e-21 C KSKGARCSKLMYDCCSGSCS GTVGRC
350 2 3.91e-21 C KGAGAKCSRLPYDCCTGSCR SGAC
470 2 4.42e-21 C RSKGAKCSKLMYDCCSGSCS GTVGRC
398 2 4.86e-21 C KSKGAQCSKLMYDCCSGSCS GTVGRC
391 2 6.09e-21 C KSKGAKCSKLLYDCCSGSCS GTVGRC
407 2 8.41e-21 C KYKGAKCSRLLYDCCSGSCS GTVGRC
378 2 1.57e-20 C KGKGQSCSKLMYDCCTGSCS RRGKC
373 2 1.07e-19 C KGKGAPCTRLMYDCCHGSCS SSKGRC
377 2 1.41e-18 C KGKGASCSRTMYNCCTGSCN RGKC
375 2 4.13e-18 C KGKGASCRKTMYDCCRGSCR SGRC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
346 1.53e-21
347 1.53e-21
348 3.86e-23
349 3.86e-23
350 3.91e-21
351 2.47e-22
358 1.98e-22
359 1.57e-22
361 3.05e-22
362 1.53e-21
363 1.98e-22
364 6.53e-22
366 1.29e-22
367 3.21e-24
368 3.21e-24
369 3.21e-24
370 3.21e-24
371 3.21e-24
373 1.07e-19
375 4.13e-18
377 1.41e-18
378 1.57e-20
388 2.82e-21
389 1.21e-21
391 6.09e-21
392 1.43e-22
393 1.43e-22
394 1.43e-22
395 4.96e-23
396 2.82e-21
397 7.22e-23
398 4.86e-21
399 3.91e-21
407 8.41e-21
408 1.98e-22
470 4.42e-21
1022 3.21e-24
1270 3.91e-21
1314 3.91e-21
1729 1.43e-22
 
0
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Time 23 secs.

Motif 2

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Summary

Sequence Logo

E-value 7.6e-417
Width 20
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AAN[DN]KA[ST]DL[MI]AL[TA]VR[GE]CC[SA][DHN]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
65 1 1.78e-24 AANNKATDLMALTVRGCCAH LPCALMYTAC
64 1 2.65e-24 AANNKATDLMALTVRGCCAD PSCSILMPYF
67 1 5.30e-24 AANNKATDLMALTVRGCCDD PSCSIHMPFF
66 1 5.30e-24 AANNKATDLMALTVRGCCDD PPCRARYPFL
54 1 6.22e-23 AANDKASDLMALTVRGCCVY PPCAVNHPDI
130 1 1.49e-22 AGNDKATDLMALTVRGCCSH PACAGNNPHI
129 1 1.49e-22 AGNDKATDLMALTVRGCCSH PACAGNNPHI
68 1 1.78e-22 AANNKATDLMALTVRGCCGN PSCSIHIPYV
72 1 9.89e-22 AASDKASELMALAVRGCCSH PACAGSNAHI
71 1 9.89e-22 AASDKASELMALAVRGCCSH PACAGNNPHI
70 1 9.89e-22 AASDKASELMALAVRGCCSH PACAGNNPDI
59 1 1.15e-21 AANDKASVQIALTVQECCAD SACSLTNPLI
58 1 1.15e-21 AANDKASVQIALTVQECCAD SACSLTNPLI
57 1 1.15e-21 AANDKASVQIALTVQECCAD AACSLTNPLI
56 1 1.15e-21 AANDKASVQIALTVQECCAD AACSLTNPLI
162 1 1.33e-21 ATNNKATDLMALTVRGCCDD PSCRAENPFL
74 1 2.05e-21 AASDKASELMALAVRGCCSN PACAGSNAHI
73 1 2.05e-21 AASDKASELMALAVRGCCSN LACAGNNLHI
62 1 5.36e-21 AANKKASDLMALTVRGCCVY PPCAVNHPDI
1567 1 1.54e-20 TANNKATDLMALTVRGCCGN PSCSIHIPYV
69 1 2.25e-20 AANNKATDLMARTVRGFCSD PSCRFRNPEL
47 1 8.59e-20 AANDKAPVQIVLTVQECCAD SACSLTNPLI
46 1 8.59e-20 AANDKAPVQIVLTVQECCAD SACSLTNPLI
63 1 1.14e-18 AANNKATDLMALRYHECCKH PPCRNTRPDL
128 1 7.38e-18 AGNAKMSALMALTIRGCCSH PVCSAMSPIC
1093 5 1.10e-17 IKNT AASNKASSLVALVVRGCCYN PVCKKYYCWK
51 1 1.10e-17 AANDKASDLMALRDGCCSDP ACSVNHPDIC
50 1 1.10e-17 AANDKASDLMALRDGCCSDP ACAVNHPDIC
53 1 6.20e-17 AANDKASDLMALRGGCCSRP PCILKHPEIC
52 1 6.20e-17 AANDKASDLMALRGGCCSRP PCILEHPEIC
1262 3 9.86e-17 NA AANDKASDVIPLALQGCCSN PVCHVDHPEL
1092 5 1.08e-16 IKNT AASNKAPSLVAIAVRGCCYN PSCWPKTYCS
9 1 1.56e-16 AAKFKAPALMELTVREGCCS DPRCSGKHQD
8 1 3.19e-16 AAKFKAPALMELTVRDECCS DPRCAVKHQD
48 1 4.55e-16 AANDKASAWIARTVRQSCCA APSCFMLC
13 1 5.91e-16 AAKFKAPALMKRTVREACCS DPRCSGQHQE
1539 7 9.93e-16 SNGRNA AADDKPSDWIALAIKQCCAN PPCKHVNCR
55 1 2.13e-15 AANDKASNLMALRDECCPNP PCKASNPDLC
12 1 2.13e-15 AAKFKAPALMKRTVRDACCS DPRCSGKHQD
774 7 2.61e-14 FDGRNA PADDKASDLIAQIVRRACCS DRRCRWRCG

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 3.19e-16
9 1.56e-16
12 2.13e-15
13 5.91e-16
46 8.59e-20
47 8.59e-20
48 4.55e-16
50 1.10e-17
51 1.10e-17
52 6.20e-17
53 6.20e-17
54 6.22e-23
55 2.13e-15
56 1.15e-21
57 1.15e-21
58 1.15e-21
59 1.15e-21
62 5.36e-21
63 1.14e-18
64 2.65e-24
65 1.78e-24
66 5.30e-24
67 5.30e-24
68 1.78e-22
69 2.25e-20
70 9.89e-22
71 9.89e-22
72 9.89e-22
73 2.05e-21
74 2.05e-21
128 7.38e-18
129 1.49e-22
130 1.49e-22
162 1.33e-21
774 2.61e-14
1092 1.08e-16
1093 1.10e-17
1262 9.86e-17
1539 9.93e-16
1567 1.54e-20
 
0
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20
25
30
35

Time 44.3 secs.

Motif 3

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Summary

Sequence Logo

E-value 2.7e-402
Width 20
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

T[HP][PS]GGAC[GN][SG]HY[HQ]CC[SN]N[FS]C[NDI]T

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
495 2 1.90e-23 C THPGGACGGHHHCCSQFCNT AANACN
924 3 5.09e-22 GC THPGGACGGHHHCCSLFCNT AANACN
493 2 5.09e-22 C THPGGACGGHHHCCSLFCNT AANACN
1257 6 1.74e-21 MTMGC THPGGACGGHYHCCSQSCNT AANSCN
497 2 2.18e-21 C THPGGACGGHHHCCSQSCNT AATTCN
496 2 2.18e-21 C THPGGACGGHHHCCSQSCNT AANSCN
494 2 1.54e-20 C THPGGACGGHHHCCSLSCNT AANACN
722 3 1.82e-20 EC THSGGACNSHDQCCNAFCDT ATRTCV
721 3 1.82e-20 EC THSGGACNSHDQCCNAFCDT ATRACV
492 2 1.82e-20 C THPGGACGFYYHCCSNYCIT ISSTCN
725 3 4.08e-20 EC THSGGACNSHTQCCDDFCST ATSTCI
1592 1 4.76e-20 THSGGACNSHDQCCNAFCST ATRTCV
724 3 6.41e-20 EC THSGGACNSHNQCCNAFCDT ATRTCV
595 3 7.41e-20 DC TPPGGACGFYYHCCSNYCIT ISSTCR
594 3 7.41e-20 DC TPPGGACGFYYHCCSNYCIT ISSTCN
723 3 9.84e-20 EC THSGGACNSHDQCCNTFCDT ATRTCV
1256 6 1.13e-19 MTMGC THPGGACAGHHHCCSQSCNT AANSCN
736 3 1.13e-19 EC TRSGGACNSHTQCCNAFCDT ATRTCV
732 3 1.13e-19 EC TRSGGACNSHTQCCDDFCDT ATRTCV
593 3 1.13e-19 DC TPPDGACGFHYHCCSKFCIT ISSTCN
506 2 1.13e-19 C TPPDGACGFHYHCCSKFCIT VSSTCN
731 3 1.30e-19 EC TRSGGACNSHDQCCNAFCDT ATRTCV
498 2 1.30e-19 C THPGGACGGHSHCCSLSCNT AANSCN
517 2 1.49e-19 C TPSGGACGFYYHCCSNYCIT ISSTCR
734 3 2.51e-19 EC TRSGGACNSHTQCCDDFCST ATSTCT
733 3 2.51e-19 EC TRSGGACNSHTQCCDDFCST ATSTCI
508 2 5.32e-19 C TPPGGACGVYYHCCSNYCIT ISSTCR
1614 1 7.65e-19 TRSGGACNSHNQCCDDFCST ATSTCV
735 3 8.61e-19 EC TRSGGACNSHTQCCDHFCST ATSTCI
596 3 8.61e-19 DC TPPGGACGFYYHCCSNYCVT ISSTCN
720 3 1.55e-18 EC TDSGGACNSHDQCCNEFCST ATRTCI
927 3 1.74e-18 GC TPPGGACGGHAHCCSQSCNI LASTCNA
926 3 2.18e-18 GC TPPGGACGGHAHCCSQSCDI LASTCNA
928 3 2.34e-17 GC TPRNGACGYHSHCCSNFCHT WANVCL
509 2 8.53e-17 C TPPGGSCGGHAHCCSKSCNI MASTCND
727 3 1.38e-16 EC TPPGGACNIHPHCCEEFCDM ANNRCLEM
489 2 6.01e-16 C TDPGGACGNPGHCCSKFCIT TSSTCN
930 3 2.23e-15 GC TPRNGFCRYHSHCCSNFCHT WAIMCL
728 3 2.23e-15 EC TPPGGACYYHSQCCGDFCQR YINSCL
1363 3 9.23e-15 QC TPVGGSCSRHYHCCSLYCNK NIGQCLATSY

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
489 6.01e-16
492 1.82e-20
493 5.09e-22
494 1.54e-20
495 1.90e-23
496 2.18e-21
497 2.18e-21
498 1.30e-19
506 1.13e-19
508 5.32e-19
509 8.53e-17
517 1.49e-19
593 1.13e-19
594 7.41e-20
595 7.41e-20
596 8.61e-19
720 1.55e-18
721 1.82e-20
722 1.82e-20
723 9.84e-20
724 6.41e-20
725 4.08e-20
727 1.38e-16
728 2.23e-15
731 1.30e-19
732 1.13e-19
733 2.51e-19
734 2.51e-19
735 8.61e-19
736 1.13e-19
924 5.09e-22
926 2.18e-18
927 1.74e-18
928 2.34e-17
930 2.23e-15
1256 1.13e-19
1257 1.74e-21
1363 9.23e-15
1592 4.76e-20
1614 7.65e-19
 
0
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30

Time 100.4 secs.

Motif 4

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Summary

Sequence Logo

E-value 4.4e-360
Width 20
Sites 38
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AA[KN][VA]K[YL][SF][KL][TV]P[EQ][ES]CC[PS]NPPC[AF]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
20 1 2.88e-24 AAKVKYSKTPEECCPNPPCF ATNSDICGGR
19 1 2.88e-24 AAKVKYSKTPEECCPNPPCF ATNSDICG
18 1 2.88e-24 AAKVKYSKTPEECCPNPPCF ATHSNICGGR
17 1 2.88e-24 AAKVKYSKTPEECCPNPPCF ATHSNICG
16 1 2.88e-24 AAKVKYSKTPEECCPNPPCF ATHSEICGGR
15 1 2.88e-24 AAKVKYSKTPEECCPNPPCF ATHSEICG
28 1 1.17e-23 AAKVKYSNTPEECCPNPPCF ATHSEICGVR
27 1 1.17e-23 AAKVKYSNTPEECCPNPPCF ATHSEICGV
30 1 1.66e-23 AAKVKYSNTPEECCSNPPCF ATHSEICGGR
29 1 1.66e-23 AAKVKYSNTPEECCSNPPCF ATHSEICG
24 1 1.72e-22 AAKVKYSLTPAECCPNPPCF AQHSNLCGAR
23 1 1.72e-22 AAKVKYSLTPAECCPNPPCF AQHSNLCGA
22 1 1.72e-22 AAKVKYSLTPAECCPNPPCF AQHSDLCGAR
21 1 1.72e-22 AAKVKYSLTPAECCPNPPCF AQHSDLCGA
32 1 3.41e-22 AAKVKYSNTREECCPNPPCF ATNSDICGGR
31 1 3.41e-22 AAKVKYSNTREECCPNPPCF ATHSEICGGR
26 1 3.69e-21 AAKVKYSLTPAECCTNPPCF AQHSDLCGAR
25 1 3.69e-21 AAKVKYSLTPAECCTNPPCF AQHSDLCGA
34 1 3.74e-19 AANAKLFAVMQSCCSTPPCA LRHMDMCG
33 1 3.74e-19 AANAKLFAVMQSCCSTPPCA LRHMDMC
37 1 1.08e-18 AANAKLFAVRQSCCSTPPCA LLYMEMCG
41 1 1.21e-18 AANAKLFDVRQSCCSTPPCA LLYMEMCG
36 1 7.66e-18 AANAKLFAVMQSCCSTPPRA LRHMDMCG
35 1 7.66e-18 AANAKLFAVMQSCCSTPPRA LRHMDMC
40 1 3.46e-17 AANAKLFDVRQSCCSAPLCA LLYRVMCG
39 1 1.30e-16 AANAKLFDVGQSCCSAPLCA LLYMVICG
38 1 1.30e-16 AANAKLFDVGQSCCSAPLCA LLYMVIC
45 1 1.88e-16 AANAKLSERLDPCCREPPCA STHTDICTRR
44 1 1.88e-16 AANAKLSERLDPCCREPPCA STHIDRCG
43 1 2.06e-16 AANAKLSERLDPCCRDPPCA STHTDICTRR
42 1 2.06e-16 AANAKLSERLDPCCRDPPCA STHIDRCG
150 1 6.51e-16 APNVKDSKASGSCCDNPSCA VNNSHCGRRR
149 1 6.51e-16 APNVKDSKASGSCCDNPSCA VNNSHC
148 1 6.51e-16 APNVKDSKASGSCCDNPSCA VNNRHCGRRR
147 1 6.51e-16 APNVKDSKASGSCCDNPSCA VNNRHC
5 5 3.09e-13 AADG KPSDWISLVTPECCSNPPCN LQNCR
4 5 3.09e-13 AADG KPSDWISLVTPECCSNPPCN LQNC
157 1 2.90e-11 ASALIAQAILRDCCSNPPCA HNNPDC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
4 3.09e-13
5 3.09e-13
15 2.88e-24
16 2.88e-24
17 2.88e-24
18 2.88e-24
19 2.88e-24
20 2.88e-24
21 1.72e-22
22 1.72e-22
23 1.72e-22
24 1.72e-22
25 3.69e-21
26 3.69e-21
27 1.17e-23
28 1.17e-23
29 1.66e-23
30 1.66e-23
31 3.41e-22
32 3.41e-22
33 3.74e-19
34 3.74e-19
35 7.66e-18
36 7.66e-18
37 1.08e-18
38 1.30e-16
39 1.30e-16
40 3.46e-17
41 1.21e-18
42 2.06e-16
43 2.06e-16
44 1.88e-16
45 1.88e-16
147 6.51e-16
148 6.51e-16
149 6.51e-16
150 6.51e-16
157 2.90e-11
 
0
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Time 119.2 secs.

Motif 5

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Summary

Sequence Logo

E-value 1.5e-276
Width 20
Sites 21
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CRSLGLLGKCIGDKCECVKH

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1619 12 2.34e-24 VCNLRRCQLS CRSLGLLGKCIGDKCECVKH
167 12 2.34e-24 VCNLKRCPLS CRSLGLLGKCIGDKCECVKH
166 12 2.34e-24 VCNLARCQLS CRSLGLLGKCIGDKCECVKH
121 12 2.34e-24 FCNLRRCQLS CRSLGLLGKCIGDKCECVKH
117 12 2.34e-24 FCNLRMCQLS CRSLGLLGKCIGDKCECVKH
116 12 2.34e-24 FCNLRLCQLS CRSLGLLGKCIGDKCECVKH
115 12 2.34e-24 FCNLRKCQLS CRSLGLLGKCIGDKCECVKH
114 12 2.34e-24 FCNLMRCQLS CRSLGLLGKCIGDKCECVKH
113 12 2.34e-24 FCNLLMCQLS CRSLGLLGKCIGDKCECVKH
112 12 2.34e-24 FCNLKMCQLS CRSLGLLGKCIGDKCECVKH
1620 12 4.26e-24 VCNLRRCQLS CRSLGLLGKCIGVKCECVKH
1618 12 4.26e-24 VCNLRMCQLS CRSLGLLGKCIGVKCECVKH
1589 12 4.26e-24 FCNLRRCQLS CRSLGLLGKCIGVKCECVKH
171 12 4.26e-24 VCNLRRCQLS CRSLGLLGKCIGVKCECVKH
168 12 2.94e-23 VCNLKRCQLS CASLGLLGKCIGDKCECVKH
165 12 2.94e-23 VCNLARCQLS CASLGLLGKCIGDKCECVKH
169 12 8.85e-23 VCNLKRCQLS CRSLGLLGKCIGDKCECVKA
118 12 2.16e-21 FCNLRMCQLS CRSLGLLGKCMGKKCRCVKH
170 12 2.54e-21 VCNLKRCQLS CRSLGLLGKCMNGKCECVKH
119 12 2.40e-20 FCNLRRCELS CRSLGLLGKCIGEECKCVPH
120 12 3.34e-19 FCNLRRCELS CRSLGLLGKCIGEECKCVPY

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
112 2.34e-24
113 2.34e-24
114 2.34e-24
115 2.34e-24
116 2.34e-24
117 2.34e-24
118 2.16e-21
119 2.40e-20
120 3.34e-19
121 2.34e-24
165 2.94e-23
166 2.34e-24
167 2.34e-24
168 2.94e-23
169 8.85e-23
170 2.54e-21
171 4.26e-24
1589 4.26e-24
1618 4.26e-24
1619 2.34e-24
1620 4.26e-24
 
0
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25
30

Time 137.5 secs.

Motif 6

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Summary

Sequence Logo

E-value 5.3e-335
Width 17
Sites 40
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PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

DECCSNPACRVN[NH]P[HE][VL]C

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1115 3 9.90e-21 IR DECCSNPACRVNNPHVC RRR
1114 3 9.90e-21 IR DECCSNPACRVNNPHVC
1078 3 9.90e-21 IA DECCSNPACRVNNPHVC
629 1 9.90e-21 DECCSNPACRVNNPHVC RRR
155 3 9.90e-21 AR DECCSNPACRVNNPHVC
97 2 9.90e-21 A DECCSNPACRVNNPHVC
1107 3 1.13e-19 IR DECCSNPACAVNNPHVC
628 1 4.72e-19 DECCSNPACRLNNPHVC RRR
1113 3 6.88e-19 IR DECCSNPACRVNNPHAC
1111 3 7.93e-19 IR DECCSNPACRVNNAHVC
1109 3 8.98e-19 IR DECCSNPACRVANPHVC
1108 3 1.04e-18 IR DECCSNPACRANNPHVC
1110 3 1.24e-18 IR DECCSNPACRVNAPHVC
1104 3 1.24e-18 IR DECCANPACRVNNPHVC
1101 3 1.47e-18 IR AECCSNPACRVNNPHVC
107 1 1.47e-18 AECCSNPACRVNNPHVC
1106 3 1.66e-18 IR DECCSNAACRVNNPHVC
1105 3 1.66e-18 IR DECCSAPACRVNNPHVC
1112 3 2.52e-18 IR DECCSNPACRVNNPAVC
1103 3 2.52e-18 IR DACCSNPACRVNNPHVC
626 1 1.56e-17 DECCSNPACRLNNPHAC RRR
653 1 5.13e-16 DPCCSNPACNVNNPQIC
640 1 5.71e-16 DGCCSDPACAVNHPDIC GG
630 1 1.08e-15 DECCSNPPCAQAHPEVC
631 1 2.23e-15 DECCSNPSCAQTHPEVC
603 1 2.47e-15 DDCCPDPACRQNHPEIC PS
604 1 2.74e-15 DDCCPDPACRQNHPELC ST
641 1 3.35e-15 DGCCSDPACSVNHPDIC GG
983 1 4.09e-15 GGCCSHPACAVNHPELC
1339 1 4.99e-15 PQCCSHPACNVDHPEIC D
1338 1 4.99e-15 PQCCSHPACNVDHPEIC
1472 2 9.00e-15 R PECCTHPACHVSHPELC
1368 1 1.20e-14 QECCSYPACNLDHPELC
1141 1 1.60e-14 KECCTHPACHVSHPELC G
1263 12 3.10e-14 AAANDKASGV NGCCSNPACHVDHAELC
654 1 3.73e-14 DPCCSYPACGANHPEIC G
159 7 4.48e-14 ASDAAH QGCCSNPVCHVEHPELC
1258 4 5.38e-14 MTV RECCSQPPCRWKHPELC S
1224 4 5.38e-14 LTV RECCSQPPCRWKHPELC S
625 1 1.44e-13 DECCSDPRCAVKHQDLC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
97 9.90e-21
107 1.47e-18
155 9.90e-21
159 4.48e-14
603 2.47e-15
604 2.74e-15
625 1.44e-13
626 1.56e-17
628 4.72e-19
629 9.90e-21
630 1.08e-15
631 2.23e-15
640 5.71e-16
641 3.35e-15
653 5.13e-16
654 3.73e-14
983 4.09e-15
1078 9.90e-21
1101 1.47e-18
1103 2.52e-18
1104 1.24e-18
1105 1.66e-18
1106 1.66e-18
1107 1.13e-19
1108 1.04e-18
1109 8.98e-19
1110 1.24e-18
1111 7.93e-19
1112 2.52e-18
1113 6.88e-19
1114 9.90e-21
1115 9.90e-21
1141 1.60e-14
1224 5.38e-14
1258 5.38e-14
1263 3.10e-14
1338 4.99e-15
1339 4.99e-15
1368 1.20e-14
1472 9.00e-15
 
0
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25

Time 189.5 secs.

Motif 7

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Summary

Sequence Logo

E-value 8.4e-268
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GCCSHP[PAV]C[AN][LVA][NS]NP[DQ][IY]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1463 2 9.00e-17 R GCCSHPVCNLNNPQM CR
1233 6 9.00e-17 MAVRG GCCSHPVCNLNNPQM CRGRR
1167 6 9.00e-17 LAVRG GCCSHPVCNLNNPQM CRGRR
985 2 9.00e-17 G GCCSHPVCNLNNPQM CR
851 1 1.56e-16 GCCSHPACNVNNPHI CG
850 1 1.56e-16 GCCSHPACNVNNPHI C
858 1 1.92e-16 GCCSHPPCFLNNPDY C
856 1 4.19e-16 GCCSHPPCAMNNPDY C
846 1 4.19e-16 GCCSHPACAGNNPDI C
1260 6 5.37e-16 MVVRG GCCSHPVCYFNNPQM CRGRR
1228 6 5.37e-16 LVVRG GCCSHPVCYFNNPQM CRGRR
986 2 5.37e-16 G GCCSHPVCYFNNPQM CR
1232 5 6.87e-16 MAVR GCCSHPACAGNNPHI CGRRR
1166 5 6.87e-16 LAVR GCCSHPACAGNNPHI CGRRR
848 1 6.87e-16 GCCSHPACAGNNPHI CS
847 1 6.87e-16 GCCSHPACAGNNPHI C
982 2 2.13e-15 G GCCSHPACAANNQDY C
984 2 2.44e-15 G GCCSHPACFASNPDY C
987 2 5.20e-15 G GCCSHPVCYVNYPQI CR
862 1 5.20e-15 GCCSLPPCALNNPDY C
1372 2 7.59e-15 Q GCCSYPACAVSNPDI CGG
860 1 7.59e-15 GCCSLPPCAANNPDY C
857 1 8.53e-15 GCCSHPPCAQNNQDY C
866 1 1.86e-14 GCCSNPACMVNNPQI C
879 1 2.84e-14 GCCSRPPCALSNPDY C
863 1 2.84e-14 GCCSLPPCALSNPDY C
861 1 3.95e-14 GCCSLPPCAASNPDY C
880 1 5.49e-14 GCCSRPPCIANNPDL C
990 2 6.81e-14 G GCCSYPPCAVSNPQH C
855 1 6.81e-14 GCCSHPACSVNHPEL C
853 1 9.35e-14 GCCSHPACSGNNPEF CRQ
831 1 1.56e-13 GCCSDPPCIANNPDL C
896 1 2.56e-13 GCCSYPPCNVSYPEI CG
688 1 4.52e-13 ECCSHPACNVDHPEI CR
883 1 6.59e-13 GCCSYPPCFATNPDC AG
882 1 6.59e-13 GCCSYPPCFATNPDC A
881 1 6.59e-13 GCCSYPPCFATNPDC
988 2 1.25e-12 G GCCSRPPCILEHPEI C
989 2 1.64e-12 G GCCSRPPCILKHPEI C
1473 3 4.64e-12 RP ECCTHPACHVSNPEL C

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
688 4.52e-13
831 1.56e-13
846 4.19e-16
847 6.87e-16
848 6.87e-16
850 1.56e-16
851 1.56e-16
853 9.35e-14
855 6.81e-14
856 4.19e-16
857 8.53e-15
858 1.92e-16
860 7.59e-15
861 3.95e-14
862 5.20e-15
863 2.84e-14
866 1.86e-14
879 2.84e-14
880 5.49e-14
881 6.59e-13
882 6.59e-13
883 6.59e-13
896 2.56e-13
982 2.13e-15
984 2.44e-15
985 9.00e-17
986 5.37e-16
987 5.20e-15
988 1.25e-12
989 1.64e-12
990 6.81e-14
1166 6.87e-16
1167 9.00e-17
1228 5.37e-16
1232 6.87e-16
1233 9.00e-17
1260 5.37e-16
1372 7.59e-15
1463 9.00e-17
1473 4.64e-12
 
0
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25

Time 208.3 secs.

Motif 8

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Summary

Sequence Logo

E-value 1.9e-226
Width 20
Sites 28
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[CM][EC]FH[RL][PG][YS][TN]CCSG[HWY]CI[IV][WLF]VCA

Further Analysis

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Data Formats

View the motif in PSPM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1026 16 6.24e-23 SKRCIGGGDP CEFHRGYTCCSEHCIIWVCA
1024 16 6.24e-23 SKGCIGGGDP CEFHRGYTCCSEHCIIWVCA
333 8 6.24e-23 CIGGGDP CEFHRGYTCCSEHCIIWVCA
1027 16 6.16e-22 SKRCLAGSAP CEFHRGYTCCSGHCLIWVCA
411 8 6.16e-22 CLAGSAP CEFHRGYTCCSGHCLIWVCA
1019 16 7.31e-22 SKRCIGGGDP CEFHRPYTCCSGYCIVFVCA
334 8 7.31e-22 CIGGGDP CEFHRPYTCCSGYCIVFVCA
1025 16 2.02e-21 SKRCIAGGQP CEFHRGYMCCSEHCIIFVCA
329 8 2.02e-21 CIAGGQP CEFHRGYMCCSEHCIIFVCA
1020 16 4.52e-21 SKRCLAGSAP CEFHKRSTCCSGHCIIWWCA
410 8 4.52e-21 CLAGSAP CEFHKRSTCCSGHCIIWWCA
1021 16 1.30e-20 SKRCLAGSAR CEFHKPSTCCSGHCIFWWCA
413 8 1.30e-20 CLAGSAR CEFHKPSTCCSGHCIFWWCA
698 9 2.32e-20 ECIEGSEP CEVFRPYTCCSGHCIIFVCA
412 8 1.94e-19 CLAGSAR CEFHKPSSCCSGHCIFWWCA
1192 11 9.68e-18 LNKRCIDGGE ICDIFFPNCCSGWCIILVCA
330 7 9.68e-18 CIDGGE ICDIFFPNCCSGWCIILVCA
417 7 1.07e-17 CLDAGE MCDLFNSKCCSGWCIILVCA
1704 8 9.58e-17 WCKQSGE MCNLLDQNCCDGYCIVFVCT
1705 8 1.26e-16 WCKQSGE MCNLLDQNCCDGYCIVLVCT
416 7 1.37e-16 CLDAGE MCDLFNSKCCSGWCIILFCA
1193 11 2.33e-16 LNKRCLDGGE ICGILFPSCCSGWCIVLVCA
419 7 2.33e-16 CLDGGE ICGILFPSCCSGWCIVLVCA
1707 8 2.55e-16 WCKQSGE MCNVLDQNCCDGYCIVFVCT
1706 8 2.78e-16 WCKQSGE MCNLLDQNCCEGYCIVLVCT
573 9 8.39e-15 DCIPGGEN CDVFRPYRCCSGYCILLLCA
1744 9 2.45e-13 YCVPKSGL CTIFQPGKCCSGWCLIYRCT
84 9 2.27e-11 ACKPKNNL CAITEMAECCSGFCLIYRCS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
84 2.27e-11
329 2.02e-21
330 9.68e-18
333 6.24e-23
334 7.31e-22
410 4.52e-21
411 6.16e-22
412 1.94e-19
413 1.30e-20
416 1.37e-16
417 1.07e-17
419 2.33e-16
573 8.39e-15
698 2.32e-20
1019 7.31e-22
1020 4.52e-21
1021 1.30e-20
1024 6.24e-23
1025 2.02e-21
1026 6.24e-23
1027 6.16e-22
1192 9.68e-18
1193 2.33e-16
1704 9.58e-17
1705 1.26e-16
1706 2.78e-16
1707 2.55e-16
1744 2.45e-13
 
0
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20
25
30
35

Time 263.1 secs.

Motif 9

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Summary

Sequence Logo

E-value 3.4e-216
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GCCS[YN]PPCF[AL][NT][NH][PS][DH][CY]

Further Analysis

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Data Formats

View the motif in PSPM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1254 5 1.63e-16 MTIK GCCSYPPCFATNPDC GRRR
1223 5 1.63e-16 LTIK GCCSYPPCFATNPDC GRRR
892 1 1.63e-16 GCCSYPPCFATNPDC GGAGGAG
891 1 1.63e-16 GCCSYPPCFATNPDC GGAAGG
890 1 1.63e-16 GCCSYPPCFATNPDC GGAAG
889 1 1.63e-16 GCCSYPPCFATNPDC GGAAAGG
888 1 1.63e-16 GCCSYPPCFATNPDC GGAA
887 1 1.63e-16 GCCSYPPCFATNPDC GAGAAG
886 1 1.63e-16 GCCSYPPCFATNPDC AGGG
885 1 1.63e-16 GCCSYPPCFATNPDC AGG
884 1 1.63e-16 GCCSYPPCFATNPDC AGAGA
1752 2 2.02e-16 Y GCCSYPPCFATNSDY C
894 1 2.02e-16 GCCSYPPCFATNSDY C
893 1 3.17e-15 GCCSYPPCFATNSDC
895 1 4.95e-14 GCCSYPPCFATNSGY C
867 1 6.37e-14 GCCSNPPCIAKNPHM CGGRR
901 1 9.16e-14 GCCVYPPCAVNHPDI CRG
900 1 9.16e-14 GCCVYPPCAVNHPDI C
689 1 1.84e-13 ECCSNPACRVNNPHV C
1253 5 2.30e-13 MTIK GCCSDPSCNVNNPDY CG
1222 5 2.30e-13 LTIK GCCSDPSCNVNNPDY CG
991 2 2.30e-13 G GCCSYPPCIANNPLC
1146 2 2.87e-13 K GCCSNPACAGNNPHV CRQ
837 1 4.41e-13 GCCSDPRCNMNNPDY C
632 2 7.42e-13 D ECCSRPPCRVNNPHV CRRR
78 1 8.22e-13 ACCSNPACRVNNPHV C
1261 17 1.50e-12 FGLITPTVRK GCCSNPACMLKNPNL C
627 2 1.50e-12 D ECCSNPACRLNNPHD CRRR
868 1 2.20e-12 GCCSNPPCYANNQAY CN
832 1 2.42e-12 GCCSDPPCRNKHPDL CG
874 1 2.93e-12 GCCSNPVCHLEHSNM C
1751 2 3.88e-12 Y GCCSNPVCHLEHSNL C
873 1 3.88e-12 GCCSNPVCHLEHSNL CTNG
870 1 3.88e-12 GCCSNPVCHLEHSNL C
876 1 8.76e-12 GCCSNPVCWQNNAEY CRES
865 1 1.91e-11 GCCSNPACAGSNAHI C
1229 6 2.08e-11 MALRD ECCASPPCRLNNPYV CH
1165 6 2.08e-11 LALRD ECCASPPCRLNNPYV CH
849 1 8.33e-11 GCCSHPACAGSNAHI C
838 1 1.05e-10 GCCSDPRCNYDHPEI CGGAAGG

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
78 8.22e-13
627 1.50e-12
632 7.42e-13
689 1.84e-13
832 2.42e-12
837 4.41e-13
838 1.05e-10
849 8.33e-11
865 1.91e-11
867 6.37e-14
868 2.20e-12
870 3.88e-12
873 3.88e-12
874 2.93e-12
876 8.76e-12
884 1.63e-16
885 1.63e-16
886 1.63e-16
887 1.63e-16
888 1.63e-16
889 1.63e-16
890 1.63e-16
891 1.63e-16
892 1.63e-16
893 3.17e-15
894 2.02e-16
895 4.95e-14
900 9.16e-14
901 9.16e-14
991 2.30e-13
1146 2.87e-13
1165 2.08e-11
1222 2.30e-13
1223 1.63e-16
1229 2.08e-11
1253 2.30e-13
1254 1.63e-16
1261 1.50e-12
1751 3.88e-12
1752 2.02e-16
 
0
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20
25
30

Time 281.9 secs.

Motif 10

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Summary

Sequence Logo

E-value 3.6e-223
Width 19
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[GC]FPKxG[PI][QPL]CCSGWC[FI]FVC[LA]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1639 10 1.57e-19 VCVDGGTFC GFPKIGGPCCSGWCIFVCL
739 11 1.94e-19 EDCEAGGRFC GFPKIGEPCCSGWCFFVCA
599 10 2.40e-19 DCVAGGHFC GFPKIGGPCCSGWCFFVCA
1745 11 4.04e-18 YDCEPPGNFC GMIKIGPPCCSGWCFFACA
669 12 4.04e-18 YDCEPPGNFC GMIKIGPPCCSGWCFFACA
617 12 4.04e-18 DDCEPPGNFC GMIKIGPPCCSGWCFFACA
606 11 4.04e-18 DDCEPPGNFC GMIKIGPPCCSGWCFFACA
1746 11 6.75e-17 YDCEPPGNFC GMIKVGPPCCSGWCFFACA
539 6 8.97e-17 CYDGG TSCDSGIQCCSGWCIFVCL
585 10 1.19e-16 DCQDSGVVC GFPKPEPHCCSGWCLFVCA
1191 16 3.05e-16 DDCLAVKKNC GFPKLGGPCCSGLCFFVCA
466 9 3.05e-16 CRPGGMIC GFPKPGPYCCSGWCFVVCL
1312 13 3.96e-16 LSWCIPTGDL CFPSDHIQCCSGKCTFVCM
537 6 6.60e-16 CYDGG TGCDSGNQCCSGWCIFVCL
541 6 9.59e-16 CYDSG TSCNTGNQCCSGWCIFVCL
1637 11 1.08e-15 VCIADDMPCG FGLFGGPLCCSGWCLFVCL
538 6 1.22e-15 CYDGG TSCDSGIQCCSGWCIFVCF
467 9 1.22e-15 CRPPGMVC GFPKPGPYCCSGWCFAVCL PV
1216 11 3.55e-15 LRWCIPSGDL CFRSDHIQCCSGKCAFVCL
1214 11 6.25e-15 LRWCIPRGDL CFPSDRIQCCSGKCTFVCM
536 6 1.08e-14 CYDGG TGCDSGNQCCSGWCIFACL
600 10 2.06e-14 DCVKAGTAC GFPKPEPACCSSWCIFVCT
1198 14 5.20e-14 RDCLSKNAFC AWPILGPLCCSGWCLYVCM
1217 11 6.35e-14 LRWCIPSGEL CFRSDHIGCCSGKCAFVCL
1215 11 6.35e-14 LRWCIPSGDL CFRSDHIGCCSGKCAFVCL
1213 11 7.02e-14 LRGCVPSGEI CYFMDHIGCCSGKCTFVCM
540 6 7.02e-14 CYDGG TSCNTGNQCCSGWCIFLCL
1176 15 1.53e-13 KCFPKNHFCG FVVMLNYLCCSGRCIFVCV
1173 15 2.23e-13 ECTANGEFCG ISVFGSYLCCSGRCVFVCI
917 11 2.69e-13 GCLEVDYFCG IPFVNNGLCCSGNCVFVCT PQ
1360 9 3.24e-13 QCRVEGEI CGMLFEAQCCDGWCFFVCM
1174 15 3.24e-13 ECTTNGEFCG ISVFASFLCCSGLCVFVCI
916 11 3.89e-13 GCLEVDYFCG IPFANNGLCCSGNCVFVCT PQ
700 11 7.32e-13 ECLEADYYCV LPFVGNGMCCSGICVFVCI AQKY
923 9 1.14e-12 GCREGGEF CGTLYEERCCSGWCFFVCV
1128 11 6.63e-12 KCAAAGEACV IPIIGNVFCCKGYCLFVCI S
1197 15 1.26e-11 SCLPLDWFCG FNIIGAFLCCSGYCLVVCM
909 12 3.44e-11 CIEDKKYCGI LPFANSGVCCSYLCIFVCV PKAP
336 9 6.26e-11 CIPDHHGC GLLHHSRYCCNGTCFFVCI P
530 7 3.99e-09 CVEDGD FCGPGYEECCSGFCLYVCI

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
336 6.26e-11
466 3.05e-16
467 1.22e-15
530 3.99e-09
536 1.08e-14
537 6.60e-16
538 1.22e-15
539 8.97e-17
540 7.02e-14
541 9.59e-16
585 1.19e-16
599 2.40e-19
600 2.06e-14
606 4.04e-18
617 4.04e-18
669 4.04e-18
700 7.32e-13
739 1.94e-19
909 3.44e-11
916 3.89e-13
917 2.69e-13
923 1.14e-12
1128 6.63e-12
1173 2.23e-13
1174 3.24e-13
1176 1.53e-13
1191 3.05e-16
1197 1.26e-11
1198 5.20e-14
1213 7.02e-14
1214 6.25e-15
1215 6.35e-14
1216 3.55e-15
1217 6.35e-14
1312 3.96e-16
1360 3.24e-13
1637 1.08e-15
1639 1.57e-19
1745 4.04e-18
1746 6.75e-17
 
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30

Time 333.8 secs.

Motif 11

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Summary

Sequence Logo

E-value 2.2e-192
Width 20
Sites 40
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PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CKG[AK]G[AE][SF]C[RG][IKR]T[SM][YG][DNL]CC[ST]GSC

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1607 3 1.67e-19 TR CKGKGAPCRKTMYDCCSGSC GRRGKCG
372 1 1.67e-19 CKGKGAPCRKTMYDCCSGSC GRRGKC
1552 4 3.19e-19 STR CQGRGASCRKTMYNCCSGSC NRGRCG
457 1 3.19e-19 CQGRGASCRKTMYNCCSGSC RSGRC
456 1 3.19e-19 CQGRGASCRKTMYNCCSGSC NRGRC
459 1 1.59e-18 CQGRGASCRRTSYDCCTGSC RSGRC
458 1 1.59e-18 CQGRGASCRKTSYDCCTGSC RSGRC
357 1 1.59e-18 CKGKGAKCRKTSYDCCTGSC RSGKC
405 1 3.35e-18 CKSTGASCRRTSYDCCTGSC DRGRC
374 1 6.82e-18 CKGKGASCHRTSYDCCTGSC NRGKC
404 1 8.11e-18 CKSTGASCRRTPYDCCTGSC RSGRC
381 1 8.11e-18 CKLKGQSCRKTSYDCCSGSC GRSGKC
382 1 4.13e-17 CKLKGQSCSRLMYDCCSGSC GRSGKC
376 1 1.35e-16 CKGKGASCRRTSYGCCTGSC RSGRC
180 1 1.80e-16 CAGKGAKCSRLMYDCCTGSC RSGKC
179 1 2.38e-16 CAGAGAKCSRLMYDCCTGSC RSGKC
390 1 7.87e-16 CKSKGAKCSKLAYDCCSGSC SGTVGRC
387 1 1.01e-15 CKQAGESCDIFSQNCCVGTC AFICIE
386 1 5.44e-15 CKQADESCNVFSLDCCTGLC LGFCVS
384 1 1.19e-14 CKQADEPCDVFSLDCCTGIC LGVCMW
343 1 1.48e-14 CKAAGKSCSRIAYNCCTGSC RSGKC
643 3 5.72e-14 DG CSNAGAFCGIHPGLCCSEIC IVWCT
1754 3 6.99e-14 YG CSNAGAFCGIHPGLCCSELC LVWCT
1753 3 6.99e-14 YG CSNAGAFCGIHPGLCCSELC LGWCT
385 1 2.22e-13 CKQADEPCDVFSLECCTGIC LGFCTW
671 3 3.22e-13 EA CYNAGTFCGIKPGLCCSAIC LSFVCISFDF
672 3 1.88e-12 EA CYPPGTFCGIKPGLCCSELC LPAVCVG
635 3 3.37e-12 DE CYPPGTFCGIKPGLCCSAIC LSFVCISFDF
1749 3 3.65e-12 YE CYSTGTFCGINGGLCCSNLC LFFVCLTFS
344 1 4.30e-12 CKAENELCNIFIQNCCDGTC LLICIQNPQ
1750 3 6.97e-12 YE CYSTGTFCGVNGGLCCSNLC LFFVCLFS
529 1 2.23e-11 CVDPGEFCGPGFGDCCTGFC LLVCI
465 1 2.79e-11 CRLGAESCDVISQNCCQGTC VFFCLP
345 1 3.49e-11 CKAESEACNIITQNCCDGKC LFFCIQIPE
409 1 5.03e-11 CLAEHETCNIFTQNCCEGVC IFICVQAPE
421 1 7.75e-11 CLEKGVLCDPSAGNCCSGEC VLVCL
183 1 8.94e-11 CAQSSELCDALDSDCCSGVC MVFFCL
520 1 1.27e-10 CTQSGELCDVIDPDCCNNFC IIFFCI
709 2 7.79e-10 E CRQPGEFCFPVVAKCCGGTC LVICI
478 1 9.44e-10 CSNFGSDCIPATHDCCSGEC FGFEDMGLCT

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
179 2.38e-16
180 1.80e-16
183 8.94e-11
343 1.48e-14
344 4.30e-12
345 3.49e-11
357 1.59e-18
372 1.67e-19
374 6.82e-18
376 1.35e-16
381 8.11e-18
382 4.13e-17
384 1.19e-14
385 2.22e-13
386 5.44e-15
387 1.01e-15
390 7.87e-16
404 8.11e-18
405 3.35e-18
409 5.03e-11
421 7.75e-11
456 3.19e-19
457 3.19e-19
458 1.59e-18
459 1.59e-18
465 2.79e-11
478 9.44e-10
520 1.27e-10
529 2.23e-11
635 3.37e-12
643 5.72e-14
671 3.22e-13
672 1.88e-12
709 7.79e-10
1552 3.19e-19
1607 1.67e-19
1749 3.65e-12
1750 6.97e-12
1753 6.99e-14
1754 6.99e-14
 
0
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Time 351.4 secs.

Motif 12

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Summary

Sequence Logo

E-value 1.8e-199
Width 19
Sites 39
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PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

TPPGG[AY]CY[YA][HP]YxCCS[NL][FA]CN

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
511 2 8.13e-17 C TPPGGYCYHPDPCCSQYCN FPRKHCL
486 2 8.13e-17 C TAPGGACYAAYTCCSNACN LNTKKCVLS
510 2 2.29e-16 C TPPGGYCYHPDPCCSQVCN FPRKHCL
503 2 2.29e-16 C TPAGGACDATTECCILFCN LATKKCQVPT
519 2 3.77e-16 C TPSGGACYYDYFCCSMTCN FNSKSCV
487 2 3.77e-16 C TAPGGACYADNTCCSNACN LNTKKCVLS
516 2 4.82e-16 C TPRNGYCYYRYFCCSRACN LTIKRCL
518 2 1.11e-15 C TPSGGACYVASTCCSNACN LNSNKCV
512 2 1.11e-15 C TPPSGYCYHPYYCCSRACN LTRKRCL
1366 3 1.40e-15 QC TPVGGYCSRHYHCCSNHCI KSIGRCVAH
1364 3 3.07e-15 QC TPVGGYCFDHHHCCSNHCI KSIGRCVAH
500 2 3.07e-15 C TPAGDACDATTECCILFCN LATKKCQVPT
499 2 3.07e-15 C TPAGDACDATTECCILFCN LATKECQVPA
738 3 3.43e-15 EC TRSGGACYSHNQCCDDFCS TATSTCV
737 3 3.43e-15 EC TRSGGACYSHNQCCDDFCS TATSTCI
525 2 3.83e-15 C TSPGGACYSASTCCSKACN LTTKRCVLS
514 2 4.27e-15 C TPRHGVCFYSYFCCSKACN PSSKRCL
513 2 4.27e-15 C TPRHGVCFYSYFCCSKACN PSSKRCH
1638 3 7.32e-15 VC TPPEGYCTYHRDCCDLYCN KTTNVCLET
1365 3 7.32e-15 QC TPVGGYCSRHHHCCSNHCI KSIGRCVAH
515 2 7.32e-15 C TPRNGVCFYSYFCCSRACN PSTKRCL
502 2 1.86e-14 C TPAGDACDATTNCCILFCN LATKKCEVPT
1613 1 4.14e-14 TRSGGACNSHNQCCDDFCS TATSTCI
726 3 5.03e-14 EC TPPEGACNHPSHCCEDFCD RGRNRCM
729 3 1.30e-13 EC TRPGGACYYDSHCCRHVCH EVFNTCM
504 2 1.72e-13 C TPAGKACDATATCCVLFCN LVTNKCQVPR
929 3 2.06e-13 GC TPRNGFCRYHSDCCSNFCH TWAIMCL
501 2 2.06e-13 C TPAGDACDATTKCCIPFCN LATKKCQVPT
763 8 4.23e-13 FAVIFTC TPPGSHCTGHSDCCSDFCS TMSDVCQ
730 3 5.50e-13 EC TRSGGACNSHDQCCANFCR KATSTCM
1361 3 7.14e-13 QC SPNGGSCSRHYHCCSLWCN KDSGVCVATS
521 2 1.10e-12 C TQTNGACYHRDTCCSKSCN LTINRCLAS
780 8 1.30e-12 FKVTLSC TPPGTYCVGPSTCCSDVCS MSNVCQ
483 2 1.41e-12 C SPPGSYCFGPAACCSNFCS TMSDVCQENW
482 2 1.41e-12 C SPPGSYCFGPAACCSNFCS TLSDVCQESW
449 2 2.14e-12 C NDPGGSCTRHYHCCQLYCN KQESVCLENE
507 2 1.14e-11 C TPPEGGCLSSYECCSKICW RPRCYPS
524 2 1.43e-11 C TSPDGACNTPPQCCSKYCI SISTTCN
719 3 1.68e-10 EC TAPSGYCDYPEECCEVECG RHYCDWWY

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
449 2.14e-12
482 1.41e-12
483 1.41e-12
486 8.13e-17
487 3.77e-16
499 3.07e-15
500 3.07e-15
501 2.06e-13
502 1.86e-14
503 2.29e-16
504 1.72e-13
507 1.14e-11
510 2.29e-16
511 8.13e-17
512 1.11e-15
513 4.27e-15
514 4.27e-15
515 7.32e-15
516 4.82e-16
518 1.11e-15
519 3.77e-16
521 1.10e-12
524 1.43e-11
525 3.83e-15
719 1.68e-10
726 5.03e-14
729 1.30e-13
730 5.50e-13
737 3.43e-15
738 3.43e-15
763 4.23e-13
780 1.30e-12
929 2.06e-13
1361 7.14e-13
1364 3.07e-15
1365 7.32e-15
1366 1.40e-15
1613 4.14e-14
1638 7.32e-15
 
0
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30

Time 404.6 secs.

Motif 13

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Summary

Sequence Logo

E-value 1.6e-190
Width 20
Sites 26
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

C[QR]K[WL][MFL][WG][GT]C[DK][ST][ET]R[DK]CC[EK][GHD][LM]VC

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1738 2 7.38e-24 Y CQKWMWTCDSERKCCEGMVC RLWCKKKLW
1736 2 6.38e-23 Y CQKWMWTCDEERKCCEGLVC RLWCKRIINM
1735 2 6.38e-23 Y CQKWMWTCDEERKCCEGLVC RLWCKKKIEW
1734 2 6.38e-23 Y CQKWMWTCDEERKCCEGLVC RLWCKKKIEE
1739 2 1.34e-22 Y CQKWMWTCDSERKCCEGYVC ELWCKYNL
1733 2 2.14e-22 Y CQKWLWTCDSERKCCEDMVC RLWCKKRL
1740 2 8.06e-22 Y CQKWMWTCDSKRKCCEDMVC QLWCKKRL
1732 2 1.23e-21 Y CQKFLWTCDTERKCCEDMVC ELWCKYKE
1731 2 1.23e-21 Y CQKFLWTCDTERKCCEDMVC ELWCKLEK
1737 2 2.74e-21 Y CQKWMWTCDSARKCCEGLVC RLWCKKII
1730 2 1.23e-19 Y CQFKMWTCDSERKCCEDMVC RLWCKLNL
1522 3 2.97e-17 SE CRWFMGGCDSTLDCCKHLSC KMGLYYCAWD
788 3 4.15e-17 GA CRWFLGGCKSTSDCCEHLSC KMGLDYCAWD
608 3 6.45e-17 DD CGKLFSGCDTNADCCEGYVC RLWCKLDW
713 2 8.91e-17 E CRYLFGGCKTTADCCKHLGC KFRDKYCAWD
1581 2 1.10e-16 T CRYLFGGCKTTADCCKHLAC RSDGKYCAWD
714 2 1.10e-16 E CRYLFGGCKTTSDCCKHLGC KFRDKYCAWD
715 2 1.68e-16 E CRYLFGGCSSTSDCCKHLSC RSDWKYCAWD
711 2 1.02e-15 E CRWYLGGCKEDSECCEHLQC HSYWEWCLWD
609 3 1.23e-15 DD CGTLFSGCDTSKDCCEGYVC HLWCKYK
607 3 1.49e-15 DD CGGLFSGCDSNADCCEGYVC RLWCKYKL
696 2 2.17e-15 E CGKFMWKCKNSNDCCKDLVC SSRWKWCVLA
716 2 5.96e-15 E CRYWLGGCSAGQTCCKHLVC SRRHGWCVWD
712 2 7.79e-15 E CRWYLGGCSQDGDCCKHLQC HSNYEWCVWD
708 2 2.22e-14 E CRKMFGGCSVDSDCCAHLGC KPTLKYCAWD
697 2 4.01e-14 E CGTLFSGCSTHADCCEGFIC KLWCRYERTW

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
607 1.49e-15
608 6.45e-17
609 1.23e-15
696 2.17e-15
697 4.01e-14
708 2.22e-14
711 1.02e-15
712 7.79e-15
713 8.91e-17
714 1.10e-16
715 1.68e-16
716 5.96e-15
788 4.15e-17
1522 2.97e-17
1581 1.10e-16
1730 1.23e-19
1731 1.23e-21
1732 1.23e-21
1733 2.14e-22
1734 6.38e-23
1735 6.38e-23
1736 6.38e-23
1737 2.74e-21
1738 7.38e-24
1739 1.34e-22
1740 8.06e-22
 
0
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25
30
35

Time 455.7 secs.

Motif 14

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Summary

Sequence Logo

E-value 5.1e-180
Width 20
Sites 24
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[KP][DE]CY[SA][PA]C[RK]K[QL]TG[CK][PA]N[GA]KC[IM]N

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1680 7 3.37e-23 VSCTGS KDCYAPCRKQTGCPNAKCIN KSCKCYGC
1679 7 3.37e-23 VSCTGS KDCYAPCRKQTGCPNAKCIN KSCKCYAC
1678 7 3.37e-23 VSCTGS KDCYAPCRKQTGCPNAKCIN KSCKCAGC
1677 7 3.37e-23 VSCTGS KDCYAPCRKQTGCPNAKCIN KSC
1682 7 7.35e-22 VSCTGS KDCYAPCRQQTGCPNAKCIN KSCKCYGC
1681 7 7.35e-22 VSCTGS KDCYAPCRKQTGCPYGKCMN RKCKCNRC
1675 7 1.18e-21 VSCTGS KDCYAACRKQTGCANAKCIN KSCKCYGC
1090 7 1.32e-20 IKCTLS KDCYSPCKKETGCPRAKCIN RNCKCYGCS
1102 7 4.64e-20 IRCSGS RDCYSPCMKQTGCPNAKCIN KSCKCYGC
1676 7 1.90e-19 VSCTGS KDCYAPCRKQTGCPNAACIN KSCKCYGC
1697 11 2.42e-18 VVIGQRCYAS PDCYSACKKLVGKATGKCTN GRCDC
1696 11 2.42e-18 VVIGQACYRS PDCYSACKKLVGKATGKCTN GRCDC
1596 8 3.38e-18 TISCTNE KQCYPHCKKETGYPNAKCMN RKCKCFGR
158 7 4.69e-18 ASCRTP KDCADPCRKETGCPYGKCMN RKCKCNRC
1698 11 2.50e-17 VVIGQRCYRS PDCYSACAKLVGKATGKCTN GRCDC
1699 11 4.54e-17 VVIGQRCYRS PDCYSACKALVGKATGKCTN GRCDC
1604 9 1.73e-16 TNVSCTTS KECWSVCQRLHNTSRGKCMN KKCRCYS
1320 8 1.73e-16 NVSCTTS KECWSVCQRLHNTSRGKCMN KKCRCYS
528 5 1.73e-16 CTTS KECWSVCQRLHNTSRGKCMN KKCRCYS
1646 11 3.00e-16 VFINVKCRGS PECLPKCKEAIGKAAGKCMN
1226 8 1.04e-15 LVKCRGT SDCGRPCQQQTGCPNSKCIN RMCKCYGC
1647 11 1.60e-15 VFINVKCRGS PECLPKCKEAIGKAAGKCVN
1645 11 4.04e-15 VFINVKCRGS PECLPKCKEAFGKAAGKCVN
1415 11 9.13e-15 QVETNVKCQG GSCASVCRKAIGVAAGKCIN GRCVC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
158 4.69e-18
528 1.73e-16
1090 1.32e-20
1102 4.64e-20
1226 1.04e-15
1320 1.73e-16
1415 9.13e-15
1596 3.38e-18
1604 1.73e-16
1645 4.04e-15
1646 3.00e-16
1647 1.60e-15
1675 1.18e-21
1676 1.90e-19
1677 3.37e-23
1678 3.37e-23
1679 3.37e-23
1680 3.37e-23
1681 7.35e-22
1682 7.35e-22
1696 2.42e-18
1697 2.42e-18
1698 2.50e-17
1699 4.54e-17
 
0
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25
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35

Time 473.2 secs.

Motif 15

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Summary

Sequence Logo

E-value 2.6e-151
Width 20
Sites 19
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

E[EA]C[EN]E[YS]CE[DE][ER][EN]K[TH]CCG[LE][ENT][ND]G

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1569 4 1.51e-23 TAT EECEEYCEDEEKTCCGEEDG EPVCARFCL
1 4 1.85e-23 AAA EECEEYCEEEEKTCCGEEDG EPVCAEFCL
1570 4 2.34e-23 TAT EECEEYCEDEEKTCCGLEDG EPVCATTCL
75 4 2.34e-23 AAT EECEEYCEDEEKTCCGLEDG EPVCATTCL
1668 3 1.22e-22 VP EECEESCEEEEKTCCGLENG QPFCSRICW
1631 3 4.65e-21 VA EECEESCEDEEKHCCNTNNG PSCAPQCF
761 5 1.09e-20 EVVT EECEEYCKEQNKTCCGLTNG RPRCVGVCF
1629 4 1.26e-20 TVT EECEEDCEDEEKHCCNTNNG PSCARLCF
1689 3 1.45e-20 VT EECEENCEEEEKHCCNTNNG PSCAPQCF
1684 3 1.91e-20 VS EACEESCEDEEKHCCHENNG VYTCLRYCW
1685 3 2.18e-20 VS EACEESCEEEEKHCCHENNG VYTCLRYCW
1640 3 1.50e-19 VD EECNEYCDDRNKECCGRTNG HPRCANVCF
946 3 1.50e-19 GD EECNEYCDDRNKECCGRTNG HPRCANVCF
945 3 1.69e-19 GD EECNEHCEDRNKECCGRTNG HPRCANVCF
1701 4 3.10e-19 VVT ETCKEYCEDRDKTCCGLENG QPDCANLCL
1528 6 2.01e-17 SITRT EACYEYCKEQNKTCCGISNG RPICVGGCI
1616 4 2.80e-16 TTD EKCNEYCEERDRNCCGKANG EPRCARMCF
1700 4 2.22e-13 VVT EACEEYCEDRDKKTCCGLEN GEPFCATLCF
1703 5 3.95e-12 WATI DECEETCNVTFKTCCGPPGD WQCVEACPV

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
1 1.85e-23
75 2.34e-23
761 1.09e-20
945 1.69e-19
946 1.50e-19
1528 2.01e-17
1569 1.51e-23
1570 2.34e-23
1616 2.80e-16
1629 1.26e-20
1631 4.65e-21
1640 1.50e-19
1668 1.22e-22
1684 1.91e-20
1685 2.18e-20
1689 1.45e-20
1700 2.22e-13
1701 3.10e-19
1703 3.95e-12
 
0
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30

Time 521.8 secs.

Motif 16

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Summary

Sequence Logo

E-value 9.0e-147
Width 20
Sites 35
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

SGEQC[TW][RLS]D[ST]SCCS[GM]SC[TC]NN[IV]

Further Analysis

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Data Formats

View the motif in PSPM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
430 4 6.92e-23 CLG SGEQCVRDTSCCSMSCTNNI CF
431 4 4.51e-21 CLG SGETCWLDSSCCSFSCTNNV CF
429 4 4.51e-21 CLG SGELCVRDTSCCSMSCTNNI CF
414 4 7.33e-21 CLA SGETCWRDTSCCSFSCTNNV CF
434 4 1.18e-20 CLG SREQCVRDTSCCSMSCTNNI CF