MEME

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use MEME in your research, please cite the following paper:
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.

Discovered Motifs   |   Block diagrams of Motifs   |   Program information   |   Explanation

Discovered Motifs

Motif Overview

Motif 1
  • 3.8e-397
  • 40 sites
 Motif 1 Logo
Motif 2
  • 4.9e-362
  • 40 sites
 Motif 2 Logo
Motif 3
  • 4.0e-301
  • 40 sites
 Motif 3 Logo
Motif 4
  • 2.2e-241
  • 40 sites
 Motif 4 Logo
Motif 5
  • 1.6e-264
  • 40 sites
 Motif 5 Logo
Motif 6
  • 2.1e-271
  • 40 sites
 Motif 6 Logo
Motif 7
  • 3.2e-202
  • 40 sites
 Motif 7 Logo
Motif 8
  • 8.7e-228
  • 40 sites
 Motif 8 Logo
Motif 9
  • 1.9e-216
  • 39 sites
 Motif 9 Logo
Motif 10
  • 6.5e-188
  • 40 sites
 Motif 10 Logo
Motif 11
  • 2.9e-178
  • 38 sites
 Motif 11 Logo
Motif 12
  • 3.1e-165
  • 34 sites
 Motif 12 Logo
Motif 13
  • 1.3e-158
  • 21 sites
 Motif 13 Logo
Motif 14
  • 3.4e-147
  • 40 sites
 Motif 14 Logo
Motif 15
  • 1.3e-123
  • 35 sites
 Motif 15 Logo
Motif 16
  • 7.3e-116
  • 34 sites
 Motif 16 Logo
Motif 17
  • 2.8e-114
  • 19 sites
 Motif 17 Logo
Motif 18
  • 2.3e-117
  • 20 sites
 Motif 18 Logo
Motif 19
  • 1.7e-122
  • 35 sites
 Motif 19 Logo
Motif 20
  • 3.1e-106
  • 40 sites
 Motif 20 Logo

Further Analysis

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Motif 1

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Summary

Sequence Logo

E-value 3.8e-397
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GAKCS[RK]LMYDCC[TS]GS

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1022 9 1.49e-18 GLPVCKGK GAKCSRLMYDCCTGS CRSGKCTRG
371 5 1.49e-18 CKGK GAKCSRLMYDCCTGS CRSGKCTRNG
370 5 1.49e-18 CKGK GAKCSRLMYDCCTGS CRSGKCTRNG
369 5 1.49e-18 CKGK GAKCSRLMYDCCTGS CRSGKCG
368 5 1.49e-18 CKGK GAKCSRLMYDCCTGS CRSGKC
367 5 1.49e-18 CKGK GAKCSRLMYDCCTGS CRSGAC
366 5 1.49e-18 CKGK GAKCSRLMYDCCTGS CASGKC
349 5 1.49e-18 CKGA GAKCSRLMYDCCTGS CRSGKCG
348 5 1.49e-18 CKGA GAKCSRLMYDCCTGS CRSGKC
180 5 1.49e-18 CAGK GAKCSRLMYDCCTGS CRSGKC
179 5 1.49e-18 CAGA GAKCSRLMYDCCTGS CRSGKC
395 5 3.05e-18 CKSK GAKCSKLMYDCCTGS CSGTVGRC
408 5 5.45e-18 CKYK GAKCSRLMYDCCSGS CSGTVGRC
397 5 5.45e-18 CKSK GAKCSRLMYDCCSGS CSGTVGRC
1729 6 7.95e-18 YCKSK GAKCSKLMYDCCSGS CSGTVGRC
470 5 7.95e-18 CRSK GAKCSKLMYDCCSGS CSGTVGRC
394 5 7.95e-18 CKSK GAKCSKLMYDCCSGS CSGTVGRCY
393 5 7.95e-18 CKSK GAKCSKLMYDCCSGS CSGTVGRC
392 5 7.95e-18 CKSK GAKCSKLMYDCCSGS CSGAVGRC
359 5 1.40e-17 CKGK GAKCSLLMYDCCTGS CRSGKC
363 5 1.82e-17 CKGK GAKCSRLMFDCCTGS CRSGKC
358 5 1.82e-17 CKGK GAKCSALMYDCCTGS CRSGKC
389 5 2.54e-17 CKSK GAKCDRLMYDCCSGS CSGTVGRC
347 5 2.54e-17 CKGA GAKCSRLLYDCCTGS CRSGKC
351 5 2.70e-17 CKGK GAACSRLMYDCCTGS CRSGKC
346 5 2.70e-17 CKGA GAACSRLMYDCCTGS CRSGKC
361 5 2.95e-17 CKGK GAKCSRAMYDCCTGS CRSGKC
364 5 3.97e-17 CKGK GAKCSRLMYACCTGS CRSGKC
1314 7 6.78e-17 NSCKGA GAKCSRLPYDCCTGS CRSGAC
1270 6 6.78e-17 NCKGA GAKCSRLPYDCCTGS CRSGACG
388 5 6.78e-17 CKSK GAKCDKLMYDCCSGS CSGTVGRC
350 5 6.78e-17 CKGA GAKCSRLPYDCCTGS CRSGAC
407 5 7.73e-17 CKYK GAKCSRLLYDCCSGS CSGTVGRC
396 5 7.73e-17 CKSK GAKCSRLLYDCCSGS CSGTVGRC
399 5 1.06e-16 CKSK GARCSKLMYDCCSGS CSGTVGRC
362 5 1.33e-16 CKGK GAKCSRLAYDCCTGS CRSGKC
398 5 1.84e-16 CKSK GAQCSKLMYDCCSGS CSGTVGRC
391 5 1.84e-16 CKSK GAKCSKLLYDCCSGS CSGTVGRC
378 5 6.22e-16 CKGK GQSCSKLMYDCCTGS CSRRGKC
382 5 6.85e-16 CKLK GQSCSRLMYDCCSGS CGRSGKC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
179 1.49e-18
180 1.49e-18
346 2.70e-17
347 2.54e-17
348 1.49e-18
349 1.49e-18
350 6.78e-17
351 2.70e-17
358 1.82e-17
359 1.40e-17
361 2.95e-17
362 1.33e-16
363 1.82e-17
364 3.97e-17
366 1.49e-18
367 1.49e-18
368 1.49e-18
369 1.49e-18
370 1.49e-18
371 1.49e-18
378 6.22e-16
382 6.85e-16
388 6.78e-17
389 2.54e-17
391 1.84e-16
392 7.95e-18
393 7.95e-18
394 7.95e-18
395 3.05e-18
396 7.73e-17
397 5.45e-18
398 1.84e-16
399 1.06e-16
407 7.73e-17
408 5.45e-18
470 7.95e-18
1022 1.49e-18
1270 6.78e-17
1314 6.78e-17
1729 7.95e-18
 
0
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25
30

Time 54 secs.

Motif 2

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Summary

Sequence Logo

E-value 4.9e-362
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AAN[DN]KA[STP]DL[MI]ALTVR

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
54 1 8.43e-21 AANDKASDLMALTVR GCCVYPPCAV
68 1 5.59e-20 AANNKATDLMALTVR GCCGNPSCSI
67 1 5.59e-20 AANNKATDLMALTVR GCCDDPSCSI
66 1 5.59e-20 AANNKATDLMALTVR GCCDDPPCRA
65 1 5.59e-20 AANNKATDLMALTVR GCCAHLPCAL
64 1 5.59e-20 AANNKATDLMALTVR GCCADPSCSI
130 1 1.29e-18 AGNDKATDLMALTVR GCCSHPACAG
129 1 1.29e-18 AGNDKATDLMALTVR GCCSHPACAG
69 1 1.45e-18 AANNKATDLMARTVR GFCSDPSCRF
62 1 1.45e-18 AANKKASDLMALTVR GCCVYPPCAV
162 1 4.92e-18 ATNNKATDLMALTVR GCCDDPSCRA
1567 1 5.58e-18 TANNKATDLMALTVR GCCGNPSCSI
74 1 7.27e-18 AASDKASELMALAVR GCCSNPACAG
73 1 7.27e-18 AASDKASELMALAVR GCCSNLACAG
72 1 7.27e-18 AASDKASELMALAVR GCCSHPACAG
71 1 7.27e-18 AASDKASELMALAVR GCCSHPACAG
70 1 7.27e-18 AASDKASELMALAVR GCCSHPACAG
59 1 8.38e-18 AANDKASVQIALTVQ ECCADSACSL
58 1 8.38e-18 AANDKASVQIALTVQ ECCADSACSL
57 1 8.38e-18 AANDKASVQIALTVQ ECCADAACSL
56 1 8.38e-18 AANDKASVQIALTVQ ECCADAACSL
51 1 2.19e-16 AANDKASDLMALRDG CCSDPACSVN
50 1 2.19e-16 AANDKASDLMALRDG CCSDPACAVN
9 1 3.02e-16 AAKFKAPALMELTVR EGCCSDPRCS
8 1 3.02e-16 AAKFKAPALMELTVR DECCSDPRCA
48 1 3.36e-16 AANDKASAWIARTVR QSCCAAPSCF
47 1 3.36e-16 AANDKAPVQIVLTVQ ECCADSACSL
46 1 3.36e-16 AANDKAPVQIVLTVQ ECCADSACSL
53 1 5.70e-16 AANDKASDLMALRGG CCSRPPCILK
52 1 5.70e-16 AANDKASDLMALRGG CCSRPPCILE
63 1 1.05e-15 AANNKATDLMALRYH ECCKHPPCRN
13 1 2.58e-15 AAKFKAPALMKRTVR EACCSDPRCS
12 1 2.58e-15 AAKFKAPALMKRTVR DACCSDPRCS
55 1 4.60e-15 AANDKASNLMALRDE CCPNPPCKAS
1093 5 8.11e-15 IKNT AASNKASSLVALVVR GCCYNPVCKK
128 1 1.70e-14 AGNAKMSALMALTIR GCCSHPVCSA
14 1 4.94e-14 AAKFKAPALMKRTVS QECCLDTRCA
1092 5 7.00e-14 IKNT AASNKAPSLVAIAVR GCCYNPSCWP
774 7 1.27e-13 FDGRNA PADDKASDLIAQIVR RACCSDRRCR
1262 3 1.39e-13 NA AANDKASDVIPLALQ GCCSNPVCHV

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 3.02e-16
9 3.02e-16
12 2.58e-15
13 2.58e-15
14 4.94e-14
46 3.36e-16
47 3.36e-16
48 3.36e-16
50 2.19e-16
51 2.19e-16
52 5.70e-16
53 5.70e-16
54 8.43e-21
55 4.60e-15
56 8.38e-18
57 8.38e-18
58 8.38e-18
59 8.38e-18
62 1.45e-18
63 1.05e-15
64 5.59e-20
65 5.59e-20
66 5.59e-20
67 5.59e-20
68 5.59e-20
69 1.45e-18
70 7.27e-18
71 7.27e-18
72 7.27e-18
73 7.27e-18
74 7.27e-18
128 1.70e-14
129 1.29e-18
130 1.29e-18
162 4.92e-18
774 1.27e-13
1092 7.00e-14
1093 8.11e-15
1262 1.39e-13
1567 5.58e-18
 
0
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25
30
35

Time 108.7 secs.

Motif 3

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Summary

Sequence Logo

E-value 4.0e-301
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[GE]CCSNP[AP]C[RA]VNNP[HD][VY]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1115 4 7.25e-19 IRD ECCSNPACRVNNPHV CRRR
1114 4 7.25e-19 IRD ECCSNPACRVNNPHV C
1101 4 7.25e-19 IRA ECCSNPACRVNNPHV C
1078 4 7.25e-19 IAD ECCSNPACRVNNPHV C
689 1 7.25e-19 ECCSNPACRVNNPHV C
629 2 7.25e-19 D ECCSNPACRVNNPHV CRRR
155 4 7.25e-19 ARD ECCSNPACRVNNPHV C
107 2 7.25e-19 A ECCSNPACRVNNPHV C
97 3 7.25e-19 AD ECCSNPACRVNNPHV C
1107 4 5.66e-18 IRD ECCSNPACAVNNPHV C
628 2 1.56e-17 D ECCSNPACRLNNPHV CRRR
1108 4 3.07e-17 IRD ECCSNPACRANNPHV C
1113 4 9.56e-17 IRD ECCSNPACRVNNPHA C
1103 4 9.56e-17 IRD ACCSNPACRVNNPHV C
78 1 9.56e-17 ACCSNPACRVNNPHV C
632 2 1.80e-16 D ECCSRPPCRVNNPHV CRRR
1105 4 2.77e-16 IRD ECCSAPACRVNNPHV C
851 1 3.15e-16 GCCSHPACNVNNPHI CG
850 1 3.15e-16 GCCSHPACNVNNPHI C
1112 4 6.24e-16 IRD ECCSNPACRVNNPAV C
626 2 7.06e-16 D ECCSNPACRLNNPHA CRRR
1109 4 1.14e-15 IRD ECCSNPACRVANPHV C
866 1 2.04e-15 GCCSNPACMVNNPQI C
856 1 7.25e-15 GCCSHPPCAMNNPDY C
653 2 1.47e-14 D PCCSNPACNVNNPQI C
1253 5 2.19e-14 MTIK GCCSDPSCNVNNPDY CG
1222 5 2.19e-14 LTIK GCCSDPSCNVNNPDY CG
862 1 2.19e-14 GCCSLPPCALNNPDY C
858 1 2.66e-14 GCCSHPPCFLNNPDY C
860 1 2.93e-14 GCCSLPPCAANNPDY C
846 1 5.69e-14 GCCSHPACAGNNPDI C
1463 2 1.08e-13 R GCCSHPVCNLNNPQM CR
837 1 1.18e-13 GCCSDPRCNMNNPDY C
831 1 1.55e-13 GCCSDPPCIANNPDL C
880 1 2.19e-13 GCCSRPPCIANNPDL C
867 1 2.38e-13 GCCSNPPCIAKNPHM CGGRR
863 1 3.35e-13 GCCSLPPCALSNPDY C
879 1 3.96e-13 GCCSRPPCALSNPDY C
861 1 4.30e-13 GCCSLPPCAASNPDY C
990 2 1.34e-12 G GCCSYPPCAVSNPQH C

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
78 9.56e-17
97 7.25e-19
107 7.25e-19
155 7.25e-19
626 7.06e-16
628 1.56e-17
629 7.25e-19
632 1.80e-16
653 1.47e-14
689 7.25e-19
831 1.55e-13
837 1.18e-13
846 5.69e-14
850 3.15e-16
851 3.15e-16
856 7.25e-15
858 2.66e-14
860 2.93e-14
861 4.30e-13
862 2.19e-14
863 3.35e-13
866 2.04e-15
867 2.38e-13
879 3.96e-13
880 2.19e-13
990 1.34e-12
1078 7.25e-19
1101 7.25e-19
1103 9.56e-17
1105 2.77e-16
1107 5.66e-18
1108 3.07e-17
1109 1.14e-15
1112 6.24e-16
1113 9.56e-17
1114 7.25e-19
1115 7.25e-19
1222 2.19e-14
1253 2.19e-14
1463 1.08e-13
 
0
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15
20

Time 160.9 secs.

Motif 4

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Summary

Sequence Logo

E-value 2.2e-241
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[EG]CCS[NHY]P[PA]C[AN]VNHP[ED][IL]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
688 1 3.03e-17 ECCSHPACNVDHPEI CR
983 2 2.03e-16 G GCCSHPACAVNHPEL C
1472 3 8.71e-16 RP ECCTHPACHVSHPEL C
1339 2 8.71e-16 P QCCSHPACNVDHPEI CD
1338 2 8.71e-16 P QCCSHPACNVDHPEI C
1141 2 8.71e-16 K ECCTHPACHVSHPEL CG
690 1 8.71e-16 ECCTHPACHVSHPEL C
855 1 2.55e-15 GCCSHPACSVNHPEL C
640 2 3.01e-15 D GCCSDPACAVNHPDI CGG
1368 2 3.54e-15 Q ECCSYPACNLDHPEL C
1262 18 5.65e-15 ASDVIPLALQ GCCSNPVCHVDHPEL CL
901 1 1.36e-14 GCCVYPPCAVNHPDI CRG
900 1 1.36e-14 GCCVYPPCAVNHPDI C
62 16 1.36e-14 ASDLMALTVR GCCVYPPCAVNHPDI CG
54 16 1.36e-14 ASDLMALTVR GCCVYPPCAVNHPDI CRGGR
159 8 1.56e-14 ASDAAHQ GCCSNPVCHVEHPEL C
1258 5 1.79e-14 MTVR ECCSQPPCRWKHPEL CS
1224 5 1.79e-14 LTVR ECCSQPPCRWKHPEL CS
641 2 2.06e-14 D GCCSDPACSVNHPDI CGG
1263 13 3.46e-14 AANDKASGVN GCCSNPACHVDHAEL C
30 12 4.46e-14 AKVKYSNTPE ECCSNPPCFATHSEI CGGRR
29 12 4.46e-14 AKVKYSNTPE ECCSNPPCFATHSEI CG
896 1 5.72e-14 GCCSYPPCNVSYPEI CG
654 2 1.18e-13 D PCCSYPACGANHPEI CG
1473 3 1.33e-13 RP ECCTHPACHVSNPEL C
630 2 1.33e-13 D ECCSNPPCAQAHPEV C
79 1 1.49e-13 ACCSYPPCNVNYPEI CGGR
989 2 2.11e-13 G GCCSRPPCILKHPEI C
838 1 2.11e-13 GCCSDPRCNYDHPEI CGGAAGG
832 1 2.37e-13 GCCSDPPCRNKHPDL CG
1329 2 3.71e-13 P ECCSDPRCNSTHPEL CG
988 2 3.71e-13 G GCCSRPPCILEHPEI C
625 2 4.15e-13 D ECCSDPRCAVKHQDL C
26 12 5.77e-13 AKVKYSLTPA ECCTNPPCFAQHSDL CGARR
25 12 5.77e-13 AKVKYSLTPA ECCTNPPCFAQHSDL CGA
631 2 6.43e-13 D ECCSNPSCAQTHPEV C
1389 6 1.35e-12 QIDRD PCCSYPDCGANHPEI CGGKR
1758 3 1.50e-12 YH ECCKNPPCRNKHPDL C
604 2 2.51e-12 D DCCPDPACRQNHPEL CST
1340 2 3.08e-12 P RCCSNPACGAGHPEI CA

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
25 5.77e-13
26 5.77e-13
29 4.46e-14
30 4.46e-14
54 1.36e-14
62 1.36e-14
79 1.49e-13
159 1.56e-14
604 2.51e-12
625 4.15e-13
630 1.33e-13
631 6.43e-13
640 3.01e-15
641 2.06e-14
654 1.18e-13
688 3.03e-17
690 8.71e-16
832 2.37e-13
838 2.11e-13
855 2.55e-15
896 5.72e-14
900 1.36e-14
901 1.36e-14
983 2.03e-16
988 3.71e-13
989 2.11e-13
1141 8.71e-16
1224 1.79e-14
1258 1.79e-14
1262 5.65e-15
1263 3.46e-14
1329 3.71e-13
1338 8.71e-16
1339 8.71e-16
1340 3.08e-12
1368 3.54e-15
1389 1.35e-12
1472 8.71e-16
1473 1.33e-13
1758 1.50e-12
 
0
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35

Time 213.5 secs.

Motif 5

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Summary

Sequence Logo

E-value 1.6e-264
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GCCS[YHN]P[PA]C[FA][AG][NT]NP[DH][CI]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1254 5 1.82e-16 MTIK GCCSYPPCFATNPDC GRRR
1223 5 1.82e-16 LTIK GCCSYPPCFATNPDC GRRR
892 1 1.82e-16 GCCSYPPCFATNPDC GGAGGAG
891 1 1.82e-16 GCCSYPPCFATNPDC GGAAGG
890 1 1.82e-16 GCCSYPPCFATNPDC GGAAG
889 1 1.82e-16 GCCSYPPCFATNPDC GGAAAGG
888 1 1.82e-16 GCCSYPPCFATNPDC GGAA
887 1 1.82e-16 GCCSYPPCFATNPDC GAGAAG
886 1 1.82e-16 GCCSYPPCFATNPDC AGGG
885 1 1.82e-16 GCCSYPPCFATNPDC AGG
884 1 1.82e-16 GCCSYPPCFATNPDC AGAGA
883 1 1.82e-16 GCCSYPPCFATNPDC AG
882 1 1.82e-16 GCCSYPPCFATNPDC A
881 1 1.82e-16 GCCSYPPCFATNPDC
984 2 5.04e-16 G GCCSHPACFASNPDY C
70 16 1.28e-15 ASELMALAVR GCCSHPACAGNNPDI CG
1232 5 1.57e-15 MAVR GCCSHPACAGNNPHI CGRRR
1166 5 1.57e-15 LAVR GCCSHPACAGNNPHI CGRRR
848 1 1.57e-15 GCCSHPACAGNNPHI CS
847 1 1.57e-15 GCCSHPACAGNNPHI C
130 16 1.57e-15 ATDLMALTVR GCCSHPACAGNNPHI CS
129 16 1.57e-15 ATDLMALTVR GCCSHPACAGNNPHI CG
71 16 1.57e-15 ASELMALAVR GCCSHPACAGNNPHI CGRRR
982 2 2.02e-15 G GCCSHPACAANNQDY C
1752 2 3.52e-15 Y GCCSYPPCFATNSDY C
894 1 3.52e-15 GCCSYPPCFATNSDY C
1372 2 9.14e-15 Q GCCSYPACAVSNPDI CGG
1146 2 2.14e-14 K GCCSNPACAGNNPHV CRQ
857 1 3.02e-14 GCCSHPPCAQNNQDY C
865 1 3.53e-13 GCCSNPACAGSNAHI C
868 1 4.71e-13 GCCSNPPCYANNQAY CN
157 12 6.18e-13 SALIAQAILR DCCSNPPCAHNNPDC
986 2 9.64e-13 G GCCSHPVCYFNNPQM CR
853 1 1.51e-12 GCCSHPACSGNNPEF CRQ
985 2 2.51e-12 G GCCSHPVCNLNNPQM CR
1111 4 5.78e-12 IRD ECCSNPACRVNNAHV C
605 2 5.78e-12 D DCCPNPPCKASNPDL CDWRS
1106 4 9.40e-12 IRD ECCSNAACRVNNPHV C
624 2 1.30e-11 D ECCPDPPCKASNPDL CDWRS
1276 2 3.55e-11 N ECCDNPPCKSSNPDL CDWRS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
70 1.28e-15
71 1.57e-15
129 1.57e-15
130 1.57e-15
157 6.18e-13
605 5.78e-12
624 1.30e-11
847 1.57e-15
848 1.57e-15
853 1.51e-12
857 3.02e-14
865 3.53e-13
868 4.71e-13
881 1.82e-16
882 1.82e-16
883 1.82e-16
884 1.82e-16
885 1.82e-16
886 1.82e-16
887 1.82e-16
888 1.82e-16
889 1.82e-16
890 1.82e-16
891 1.82e-16
892 1.82e-16
894 3.52e-15
982 2.02e-15
984 5.04e-16
985 2.51e-12
986 9.64e-13
1106 9.40e-12
1111 5.78e-12
1146 2.14e-14
1166 1.57e-15
1223 1.82e-16
1232 1.57e-15
1254 1.82e-16
1276 3.55e-11
1372 9.14e-15
1752 3.52e-15
 
0
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25
30
35

Time 268.2 secs.

Motif 6

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Summary

Sequence Logo

E-value 2.1e-271
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

T[PH][PS]GGAC[GN][GS]H[YHD][HQ]CC[SN]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1257 6 8.01e-18 MTMGC THPGGACGGHYHCCS QSCNTAANSC
924 3 8.01e-18 GC THPGGACGGHHHCCS LFCNTAANAC
497 2 8.01e-18 C THPGGACGGHHHCCS QSCNTAATTC
496 2 8.01e-18 C THPGGACGGHHHCCS QSCNTAANSC
495 2 8.01e-18 C THPGGACGGHHHCCS QFCNTAANAC
494 2 8.01e-18 C THPGGACGGHHHCCS LSCNTAANAC
493 2 8.01e-18 C THPGGACGGHHHCCS LFCNTAANAC
492 2 2.19e-16 C THPGGACGFYYHCCS NYCITISSTC
498 2 3.09e-16 C THPGGACGGHSHCCS LSCNTAANSC
596 3 5.82e-16 DC TPPGGACGFYYHCCS NYCVTISSTC
595 3 5.82e-16 DC TPPGGACGFYYHCCS NYCITISSTC
594 3 5.82e-16 DC TPPGGACGFYYHCCS NYCITISSTC
1256 6 9.31e-16 MTMGC THPGGACAGHHHCCS QSCNTAANSC
927 3 9.31e-16 GC TPPGGACGGHAHCCS QSCNILASTC
926 3 9.31e-16 GC TPPGGACGGHAHCCS QSCDILASTC
593 3 1.42e-15 DC TPPDGACGFHYHCCS KFCITISSTC
506 2 1.42e-15 C TPPDGACGFHYHCCS KFCITVSSTC
517 2 2.13e-15 C TPSGGACGFYYHCCS NYCITISSTC
1592 1 3.27e-15 THSGGACNSHDQCCN AFCSTATRTC
723 3 3.27e-15 EC THSGGACNSHDQCCN TFCDTATRTC
722 3 3.27e-15 EC THSGGACNSHDQCCN AFCDTATRTC
721 3 3.27e-15 EC THSGGACNSHDQCCN AFCDTATRAC
508 2 5.27e-15 C TPPGGACGVYYHCCS NYCITISSTC
509 2 1.72e-14 C TPPGGSCGGHAHCCS KSCNIMASTC
724 3 2.17e-14 EC THSGGACNSHNQCCN AFCDTATRTC
731 3 2.71e-14 EC TRSGGACNSHDQCCN AFCDTATRTC
720 3 4.19e-14 EC TDSGGACNSHDQCCN EFCSTATRTC
1366 3 4.68e-14 QC TPVGGYCSRHYHCCS NHCIKSIGRC
1365 3 4.68e-14 QC TPVGGYCSRHHHCCS NHCIKSIGRC
1363 3 8.80e-14 QC TPVGGSCSRHYHCCS LYCNKNIGQC
1612 1 1.47e-13 TRSGGACNSHDQCCI NFCRKATSTC
736 3 1.80e-13 EC TRSGGACNSHTQCCN AFCDTATRTC
730 3 1.99e-13 EC TRSGGACNSHDQCCA NFCRKATSTC
928 3 2.20e-13 GC TPRNGACGYHSHCCS NFCHTWANVC
727 3 2.20e-13 EC TPPGGACNIHPHCCE EFCDMANNRC
1364 3 2.43e-13 QC TPVGGYCFDHHHCCS NHCIKSIGRC
728 3 8.46e-13 EC TPPGGACYYHSQCCG DFCQRYINSC
1361 3 7.11e-12 QC SPNGGSCSRHYHCCS LWCNKDSGVC
489 2 7.11e-12 C TDPGGACGNPGHCCS KFCITTSSTC
930 3 1.77e-11 GC TPRNGFCRYHSHCCS NFCHTWAIMC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
489 7.11e-12
492 2.19e-16
493 8.01e-18
494 8.01e-18
495 8.01e-18
496 8.01e-18
497 8.01e-18
498 3.09e-16
506 1.42e-15
508 5.27e-15
509 1.72e-14
517 2.13e-15
593 1.42e-15
594 5.82e-16
595 5.82e-16
596 5.82e-16
720 4.19e-14
721 3.27e-15
722 3.27e-15
723 3.27e-15
724 2.17e-14
727 2.20e-13
728 8.46e-13
730 1.99e-13
731 2.71e-14
736 1.80e-13
924 8.01e-18
926 9.31e-16
927 9.31e-16
928 2.20e-13
930 1.77e-11
1256 9.31e-16
1257 8.01e-18
1361 7.11e-12
1363 8.80e-14
1364 2.43e-13
1365 4.68e-14
1366 4.68e-14
1592 3.27e-15
1612 1.47e-13
 
0
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30

Time 322.4 secs.

Motif 7

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Summary

Sequence Logo

E-value 3.2e-202
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[EG]CC[SP][ND]P[PV]CF[AL]TH[SP][DNE][LIM]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
18 12 6.45e-18 AKVKYSKTPE ECCPNPPCFATHSNI CGGRR
17 12 6.45e-18 AKVKYSKTPE ECCPNPPCFATHSNI CG
742 2 1.33e-17 E ECCPNPPCFATHSEI CG
31 12 1.33e-17 AKVKYSNTRE ECCPNPPCFATHSEI CGGRR
28 12 1.33e-17 AKVKYSNTPE ECCPNPPCFATHSEI CGVRR
27 12 1.33e-17 AKVKYSNTPE ECCPNPPCFATHSEI CGV
16 12 1.33e-17 AKVKYSKTPE ECCPNPPCFATHSEI CGGRR
15 12 1.33e-17 AKVKYSKTPE ECCPNPPCFATHSEI CG
22 12 7.54e-17 AKVKYSLTPA ECCPNPPCFAQHSDL CGARR
21 12 7.54e-17 AKVKYSLTPA ECCPNPPCFAQHSDL CGA
24 12 1.01e-16 AKVKYSLTPA ECCPNPPCFAQHSNL CGARR
23 12 1.01e-16 AKVKYSLTPA ECCPNPPCFAQHSNL CGA
869 1 2.37e-15 GCCSNPVCFATHSNL C
743 2 3.97e-15 E ECCPNPPCFATNSDI CG
874 1 6.51e-15 GCCSNPVCHLEHSNM C
1751 2 1.40e-14 Y GCCSNPVCHLEHSNL C
873 1 1.40e-14 GCCSNPVCHLEHSNL CTNG
872 1 1.40e-14 GCCSNPVCHLEHSNL CGGAAGG
871 1 1.40e-14 GCCSNPVCHLEHSNL CGAGGAAG
870 1 1.40e-14 GCCSNPVCHLEHSNL C
875 1 4.92e-14 GCCSNPVCHVEHSYM C
8 17 7.49e-13 PALMELTVRD ECCSDPRCAVKHQDL CG
34 12 1.28e-12 ANAKLFAVMQ SCCSTPPCALRHMDM CG
33 12 1.28e-12 ANAKLFAVMQ SCCSTPPCALRHMDM C
1259 6 3.54e-12 MTVRE ECCSDPRCSVGHQDM CR
1225 6 3.54e-12 LTVRE ECCSDPRCSVGHQDM CR
1178 3 8.49e-12 LD PCCRDPPCASTHTDI CT
43 12 8.49e-12 ANAKLSERLD PCCRDPPCASTHTDI CTRRR
1261 17 2.82e-11 FGLITPTVRK GCCSNPACMLKNPNL C
603 2 3.08e-11 D DCCPDPACRQNHPEI CPS
1180 3 4.38e-11 LD PCCREPPCASTHTDI CT
1411 2 5.69e-11 Q SCCSTPPCALLYMEM C
745 2 6.20e-11 E GCCSDPRCSGKHQDL CS
1229 6 1.57e-10 MALRD ECCASPPCRLNNPYV CH
1165 6 1.57e-10 LALRD ECCASPPCRLNNPYV CH
987 2 1.84e-10 G GCCSHPVCYVNYPQI CR
1757 3 2.00e-10 YH ECCKHPPCRNTRPDL CG
1104 4 2.55e-10 IRD ECCANPACRVNNPHV C
801 1 2.55e-10 GCCDDPPCRARYPFL CI
1499 1 4.45e-10 SCCSDSDCNANHPDM CS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 7.49e-13
15 1.33e-17
16 1.33e-17
17 6.45e-18
18 6.45e-18
21 7.54e-17
22 7.54e-17
23 1.01e-16
24 1.01e-16
27 1.33e-17
28 1.33e-17
31 1.33e-17
33 1.28e-12
34 1.28e-12
43 8.49e-12
603 3.08e-11
742 1.33e-17
743 3.97e-15
745 6.20e-11
801 2.55e-10
869 2.37e-15
870 1.40e-14
871 1.40e-14
872 1.40e-14
873 1.40e-14
874 6.51e-15
875 4.92e-14
987 1.84e-10
1104 2.55e-10
1165 1.57e-10
1178 8.49e-12
1180 4.38e-11
1225 3.54e-12
1229 1.57e-10
1259 3.54e-12
1261 2.82e-11
1411 5.69e-11
1499 4.45e-10
1751 1.40e-14
1757 2.00e-10
 
0
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25
30

Time 372.9 secs.

Motif 8

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Summary

Sequence Logo

E-value 8.7e-228
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[LG][GC]LL[GA]KC[IM][GN][DK]KC[EK]C[VY]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1619 15 1.60e-17 LRRCQLSCRS LGLLGKCIGDKCECV KH
169 15 1.60e-17 LKRCQLSCRS LGLLGKCIGDKCECV KA
168 15 1.60e-17 LKRCQLSCAS LGLLGKCIGDKCECV KH
167 15 1.60e-17 LKRCPLSCRS LGLLGKCIGDKCECV KH
166 15 1.60e-17 LARCQLSCRS LGLLGKCIGDKCECV KH
165 15 1.60e-17 LARCQLSCAS LGLLGKCIGDKCECV KH
121 15 1.60e-17 LRRCQLSCRS LGLLGKCIGDKCECV KH
117 15 1.60e-17 LRMCQLSCRS LGLLGKCIGDKCECV KH
116 15 1.60e-17 LRLCQLSCRS LGLLGKCIGDKCECV KH
115 15 1.60e-17 LRKCQLSCRS LGLLGKCIGDKCECV KH
114 15 1.60e-17 LMRCQLSCRS LGLLGKCIGDKCECV KH
113 15 1.60e-17 LLMCQLSCRS LGLLGKCIGDKCECV KH
112 15 1.60e-17 LKMCQLSCRS LGLLGKCIGDKCECV KH
1620 15 1.29e-16 LRRCQLSCRS LGLLGKCIGVKCECV KH
1618 15 1.29e-16 LRMCQLSCRS LGLLGKCIGVKCECV KH
1589 15 1.29e-16 LRRCQLSCRS LGLLGKCIGVKCECV KH
171 15 1.29e-16 LRRCQLSCRS LGLLGKCIGVKCECV KH
170 15 2.64e-16 LKRCQLSCRS LGLLGKCMNGKCECV KH
118 15 2.75e-15 LRMCQLSCRS LGLLGKCMGKKCRCV KH
120 15 2.00e-14 LRRCELSCRS LGLLGKCIGEECKCV PY
119 15 2.00e-14 LRRCELSCRS LGLLGKCIGEECKCV PH
1624 15 2.03e-12 GGCNRKCCPG GCRSGKCINGKCQCY
1623 15 2.03e-12 GGCNRKCCAG GCRSGKCINGKCQCY
1604 20 2.43e-12 ECWSVCQRLH NTSRGKCMNKKCRCY S
1320 19 2.43e-12 ECWSVCQRLH NTSRGKCMNKKCRCY S
528 16 2.43e-12 ECWSVCQRLH NTSRGKCMNKKCRCY S
1682 18 2.66e-12 DCYAPCRQQT GCPNAKCINKSCKCY GC
1680 18 2.66e-12 DCYAPCRKQT GCPNAKCINKSCKCY GC
1679 18 2.66e-12 DCYAPCRKQT GCPNAKCINKSCKCY AC
1102 18 2.66e-12 DCYSPCMKQT GCPNAKCINKSCKCY GC
3 16 3.17e-12 SDCRVKCVAM GFSSGKCINSKCKCY K
1675 18 4.89e-12 DCYAACRKQT GCANAKCINKSCKCY GC
172 16 4.89e-12 RTCDKDCKRR GYRSGKCINNACKCY PYGK
1596 19 5.80e-12 QCYPHCKKET GYPNAKCMNRKCKCF GR
1630 16 1.23e-11 RTCDKDCTSR KYRSGKCINNACKCY PY
1090 18 2.33e-11 DCYSPCKKET GCPRAKCINRNCKCY GCS
1394 18 6.82e-11 QHCTNFCRKN KCTHGKCMNRKCKCF NCK
83 9 9.89e-11 ACGSCRKK CKGSGKCINGRCKCY
1756 3 1.77e-10 YG SSAGAKCMNGKCKCY NN
82 9 3.33e-10 ACGSCRKK CKGPGKCINGRCKCY

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
3 3.17e-12
82 3.33e-10
83 9.89e-11
112 1.60e-17
113 1.60e-17
114 1.60e-17
115 1.60e-17
116 1.60e-17
117 1.60e-17
118 2.75e-15
119 2.00e-14
120 2.00e-14
121 1.60e-17
165 1.60e-17
166 1.60e-17
167 1.60e-17
168 1.60e-17
169 1.60e-17
170 2.64e-16
171 1.29e-16
172 4.89e-12
528 2.43e-12
1090 2.33e-11
1102 2.66e-12
1320 2.43e-12
1394 6.82e-11
1589 1.29e-16
1596 5.80e-12
1604 2.43e-12
1618 1.29e-16
1619 1.60e-17
1620 1.29e-16
1623 2.03e-12
1624 2.03e-12
1630 1.23e-11
1675 4.89e-12
1679 2.66e-12
1680 2.66e-12
1682 2.66e-12
1756 1.77e-10
 
0
5
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15
20
25
30
35

Time 428 secs.

Motif 9

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Summary

Sequence Logo

E-value 1.9e-216
Width 14
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GRCC[HN]PACG[KPQ][NK][YTF]S[CK]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1046 1 5.52e-16 GRCCHPACGQNFSC
1042 1 5.52e-16 GRCCHPACGKNYSC
1049 1 7.32e-16 GRCCHPACGQNTSC
1056 3 1.25e-15 GR GRCCHPACGPNYSC
1045 1 1.25e-15 GRCCHPACGPNYSC
1043 1 6.26e-15 GRCCHPACGKYYSC
1047 1 8.67e-15 GRCCHPACGQNTDC
1044 1 1.18e-14 GRCCHPACGNNTSC
1288 2 1.43e-14 N GRCCHPACGKYFSC
1287 2 1.43e-14 N GRCCHPACGKHFSC
650 2 1.43e-14 D GRCCHPACGKHFSC
1051 1 1.76e-14 GRCCNPACGQNTSC
1050 1 2.35e-14 GRCCHPACGQQTSC
1041 1 2.90e-14 GRCCHPACGENTSC
1048 1 4.13e-14 GRCCHPACGQNTKC
1055 1 7.03e-14 GRCEHPACGQNTSK
1283 2 7.80e-14 N GRCCHPACAKYFSC GR
1282 2 7.80e-14 N GRCCHPACAKYFSC
1053 1 9.54e-14 GRCDHPACGQNTSK
953 1 1.51e-13 GECCHPACGQNTSC
649 2 2.53e-13 D GRCCHPACAKHFNC
1284 2 2.80e-13 N GRCCHPACARKYNC
757 6 2.80e-13 ESDRN GRCCHPACARKYNC GR
1286 2 3.41e-13 N GRCCHPACGGKYVK C
1054 1 3.81e-13 GRCEHPACGNNTSK
1052 1 5.24e-13 GRCDHPACGNNTSK
1285 2 5.82e-13 N GRCCHPACGAKYFK CG
174 1 5.82e-13 AYCCHPACGPNYSC GTSCS
759 6 1.92e-12 ESERN ERCCHPACARKYNC GR
173 1 3.12e-12 AYCCHPACGKNFDC
797 1 4.14e-12 GCCCNPACGPKYSC
1281 2 7.15e-12 N GHCCHPACGGKYVK C
800 1 9.34e-12 GCCCNPACGPNYGC GTSCSRTL
799 1 9.34e-12 GCCCNPACGPNYGC GTSCSRPSEP
798 1 9.34e-12 GCCCNPACGPNYGC GTSCS
748 1 1.44e-11 EICCNPACGPKYSC
1661 4 2.20e-11 VKK KQCCNPACGPKYSC GH
175 1 3.62e-11 AYCCHPVCGKNFDC
548 16 3.75e-10 STESDVIVTC EPCMNPACGPNYGK C

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
173 3.12e-12
174 5.82e-13
175 3.62e-11
548 3.75e-10
649 2.53e-13
650 1.43e-14
748 1.44e-11
757 2.80e-13
759 1.92e-12
797 4.14e-12
798 9.34e-12
799 9.34e-12
800 9.34e-12
953 1.51e-13
1041 2.90e-14
1042 5.52e-16
1043 6.26e-15
1044 1.18e-14
1045 1.25e-15
1046 5.52e-16
1047 8.67e-15
1048 4.13e-14
1049 7.32e-16
1050 2.35e-14
1051 1.76e-14
1052 5.24e-13
1053 9.54e-14
1054 3.81e-13
1055 7.03e-14
1056 1.25e-15
1281 7.15e-12
1282 7.80e-14
1283 7.80e-14
1284 2.80e-13
1285 5.82e-13
1286 3.41e-13
1287 1.43e-14
1288 1.43e-14
1661 2.20e-11
 
0
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30

Time 480.9 secs.

Motif 10

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Summary

Sequence Logo

E-value 6.5e-188
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

IG[PI][PQL]CCSGWC[FI]FVC[LA]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
539 10 3.09e-16 CYDGGTSCD SGIQCCSGWCIFVCL
739 15 1.17e-15 AGGRFCGFPK IGEPCCSGWCFFVCA
599 14 1.17e-15 AGGHFCGFPK IGGPCCSGWCFFVCA
1639 14 2.14e-15 DGGTFCGFPK IGGPCCSGWCIFVCL
537 10 2.59e-15 CYDGGTGCD SGNQCCSGWCIFVCL
541 10 3.09e-15 CYDSGTSCN TGNQCCSGWCIFVCL
1637 15 9.03e-15 DDMPCGFGLF GGPLCCSGWCLFVCL
538 10 9.03e-15 CYDGGTSCD SGIQCCSGWCIFVCF
1745 15 1.26e-14 PPGNFCGMIK IGPPCCSGWCFFACA
1200 20 1.26e-14 PPGNFCGMIK IGPPCCSGWCFFACA
669 16 1.26e-14 PPGNFCGMIK IGPPCCSGWCFFACA
617 16 1.26e-14 PPGNFCGMIK IGPPCCSGWCFFACA
606 15 1.26e-14 PPGNFCGMIK IGPPCCSGWCFFACA
1312 17 2.02e-14 IPTGDLCFPS DHIQCCSGKCTFVCM
536 10 5.80e-14 CYDGGTGCD SGNQCCSGWCIFACL
1216 15 6.68e-14 IPSGDLCFRS DHIQCCSGKCAFVCL
1746 15 1.75e-13 PPGNFCGMIK VGPPCCSGWCFFACA
1214 15 2.94e-13 IPRGDLCFPS DRIQCCSGKCTFVCM
1213 15 3.80e-13 VPSGEICYFM DHIGCCSGKCTFVCM
1198 18 4.30e-13 SKNAFCAWPI LGPLCCSGWCLYVCM
540 10 4.89e-13 CYDGGTSCN TGNQCCSGWCIFLCL
1191 20 7.97e-13 AVKKNCGFPK LGGPCCSGLCFFVCA
585 14 7.97e-13 DSGVVCGFPK PEPHCCSGWCLFVCA
1217 15 1.01e-12 IPSGELCFRS DHIGCCSGKCAFVCL
1215 15 1.01e-12 IPSGDLCFRS DHIGCCSGKCAFVCL
1360 13 1.81e-12 RVEGEICGML FEAQCCDGWCFFVCM
923 13 1.81e-12 REGGEFCGTL YEERCCSGWCFFVCV
466 13 2.54e-12 PGGMICGFPK PGPYCCSGWCFVVCL
700 15 7.45e-12 ADYYCVLPFV GNGMCCSGICVFVCI AQKY
1176 19 1.01e-11 KNHFCGFVVM LNYLCCSGRCIFVCV
1173 19 1.01e-11 NGEFCGISVF GSYLCCSGRCVFVCI
1174 19 2.48e-11 NGEFCGISVF ASFLCCSGLCVFVCI
917 15 2.48e-11 VDYFCGIPFV NNGLCCSGNCVFVCT PQ
916 15 2.48e-11 VDYFCGIPFA NNGLCCSGNCVFVCT PQ
1683 19 5.28e-11 VPSGEVCRRY EFVGCCSGKCFFVCS
1197 19 1.86e-10 LDWFCGFNII GAFLCCSGYCLVVCM
1128 15 2.42e-10 AGEACVIPII GNVFCCKGYCLFVCI S
530 11 4.04e-10 CVEDGDFCGP GYEECCSGFCLYVCI
336 13 7.22e-10 PDHHGCGLLH HSRYCCNGTCFFVCI P
529 11 2.20e-09 CVDPGEFCGP GFGDCCTGFCLLVCI

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
336 7.22e-10
466 2.54e-12
529 2.20e-09
530 4.04e-10
536 5.80e-14
537 2.59e-15
538 9.03e-15
539 3.09e-16
540 4.89e-13
541 3.09e-15
585 7.97e-13
599 1.17e-15
606 1.26e-14
617 1.26e-14
669 1.26e-14
700 7.45e-12
739 1.17e-15
916 2.48e-11
917 2.48e-11
923 1.81e-12
1128 2.42e-10
1173 1.01e-11
1174 2.48e-11
1176 1.01e-11
1191 7.97e-13
1197 1.86e-10
1198 4.30e-13
1200 1.26e-14
1213 3.80e-13
1214 2.94e-13
1215 1.01e-12
1216 6.68e-14
1217 1.01e-12
1312 2.02e-14
1360 1.81e-12
1637 9.03e-15
1639 2.14e-15
1683 5.28e-11
1745 1.26e-14
1746 1.75e-13
 
0
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Time 534.5 secs.

Motif 11

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Summary

Sequence Logo

E-value 2.9e-178
Width 15
Sites 38
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[GP][YS][TN]CCSG[HYW]C[IL][IV][FWL]VCA

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
698 14 3.95e-18 EGSEPCEVFR PYTCCSGHCIIFVCA
1019 21 2.18e-16 GGGDPCEFHR PYTCCSGYCIVFVCA
334 13 2.18e-16 GGGDPCEFHR PYTCCSGYCIVFVCA
1026 21 2.73e-16 GGGDPCEFHR GYTCCSEHCIIWVCA
1024 21 2.73e-16 GGGDPCEFHR GYTCCSEHCIIWVCA
333 13 2.73e-16 GGGDPCEFHR GYTCCSEHCIIWVCA
1027 21 4.13e-16 AGSAPCEFHR GYTCCSGHCLIWVCA
411 13 4.13e-16 AGSAPCEFHR GYTCCSGHCLIWVCA
1025 21 1.63e-15 AGGQPCEFHR GYMCCSEHCIIFVCA
329 13 1.63e-15 AGGQPCEFHR GYMCCSEHCIIFVCA
1192 16 3.27e-15 IDGGEICDIF FPNCCSGWCIILVCA
330 12 3.27e-15 IDGGEICDIF FPNCCSGWCIILVCA
1021 21 3.86e-15 AGSARCEFHK PSTCCSGHCIFWWCA
413 13 3.86e-15 AGSARCEFHK PSTCCSGHCIFWWCA
1020 21 8.57e-15 AGSAPCEFHK RSTCCSGHCIIWWCA
410 13 8.57e-15 AGSAPCEFHK RSTCCSGHCIIWWCA
412 13 5.96e-14 AGSARCEFHK PSSCCSGHCIFWWCA
1193 16 7.65e-14 LDGGEICGIL FPSCCSGWCIVLVCA
419 12 7.65e-14 LDGGEICGIL FPSCCSGWCIVLVCA
417 12 8.64e-14 LDAGEMCDLF NSKCCSGWCIILVCA
1707 13 2.47e-13 KQSGEMCNVL DQNCCDGYCIVFVCT
1704 13 2.47e-13 KQSGEMCNLL DQNCCDGYCIVFVCT
1705 13 7.96e-13 KQSGEMCNLL DQNCCDGYCIVLVCT
416 12 7.96e-13 LDAGEMCDLF NSKCCSGWCIILFCA
1706 13 1.92e-12 KQSGEMCNLL DQNCCEGYCIVLVCT
573 14 1.26e-11 PGGENCDVFR PYRCCSGYCILLLCA
1750 14 1.91e-11 YSTGTFCGVN GGLCCSNLCLFFVCL FS
1749 14 1.91e-11 YSTGTFCGIN GGLCCSNLCLFFVCL TFS
1748 14 1.91e-11 YLLVHFCGIN GGLCCSNLCLFFVCL TFS
1744 14 3.38e-11 PKSGLCTIFQ PGKCCSGWCLIYRCT
181 12 4.29e-11 APFLHLCTFF FPNCCNGYCVQFICL
520 12 8.63e-11 TQSGELCDVI DPDCCNNFCIIFFCI
183 12 1.00e-10 AQSSELCDAL DSDCCSGVCMVFFCL
542 11 1.96e-10 CYDSGTSCNT GNQCCSGWCIFVSCL
671 14 2.27e-10 YNAGTFCGIK PGLCCSAICLSFVCI SFDF
635 14 2.27e-10 YPPGTFCGIK PGLCCSAICLSFVCI SFDF
182 12 5.31e-10 APFLHPCTFF FPNCCNSYCVQFICL
84 14 3.63e-09 PKNNLCAITE MAECCSGFCLIYRCS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
84 3.63e-09
181 4.29e-11
182 5.31e-10
183 1.00e-10
329 1.63e-15
330 3.27e-15
333 2.73e-16
334 2.18e-16
410 8.57e-15
411 4.13e-16
412 5.96e-14
413 3.86e-15
416 7.96e-13
417 8.64e-14
419 7.65e-14
520 8.63e-11
542 1.96e-10
573 1.26e-11
635 2.27e-10
671 2.27e-10
698 3.95e-18
1019 2.18e-16
1020 8.57e-15
1021 3.86e-15
1024 2.73e-16
1025 1.63e-15
1026 2.73e-16
1027 4.13e-16
1192 3.27e-15
1193 7.65e-14
1704 2.47e-13
1705 7.96e-13
1706 1.92e-12
1707 2.47e-13
1744 3.38e-11
1748 1.91e-11
1749 1.91e-11
1750 1.91e-11
 
0
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35

Time 586.1 secs.

Motif 12

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Summary

Sequence Logo

E-value 3.1e-165
Width 15
Sites 34
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

K[GS][KP]GASC[RS][RK][TL][MS]Y[DN]CC

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
375 2 2.33e-18 C KGKGASCRKTMYDCC RGSCRSGRC
377 2 3.42e-17 C KGKGASCSRTMYNCC TGSCNRGKC
1607 4 4.22e-17 TRC KGKGAPCRKTMYDCC SGSCGRRGKC
372 2 4.22e-17 C KGKGAPCRKTMYDCC SGSCGRRGKC
1552 5 3.58e-16 STRC QGRGASCRKTMYNCC SGSCNRGRCG
457 2 3.58e-16 C QGRGASCRKTMYNCC SGSCRSGRC
456 2 3.58e-16 C QGRGASCRKTMYNCC SGSCNRGRC
365 2 6.03e-16 C KGKGAKCSRLMYDCC
379 2 8.21e-16 C KGPGAKCLKTMYDCC KYSCSRGRC
357 2 1.33e-15 C KGKGAKCRKTSYDCC TGSCRSGKC
459 2 1.52e-15 C QGRGASCRRTSYDCC TGSCRSGRC
458 2 2.40e-15 C QGRGASCRKTSYDCC TGSCRSGRC
374 2 2.77e-15 C KGKGASCHRTSYDCC TGSCNRGKC
405 2 6.41e-15 C KSTGASCRRTSYDCC TGSCDRGRC
373 2 8.36e-15 C KGKGAPCTRLMYDCC HGSCSSSKGR
376 2 2.91e-14 C KGKGASCRRTSYGCC TGSCRSGRC
441 2 9.10e-14 C LSPGSSCSRLMYNCC RSCNPYSRKC
404 2 1.26e-13 C KSTGASCRRTPYDCC TGSCRSGRC
390 2 1.26e-13 C KSKGAKCSKLAYDCC SGSCSGTVGR
381 2 1.56e-13 C KLKGQSCRKTSYDCC SGSCGRSGKC
401 2 4.85e-13 C KSPGSSCSPTSYNCC RSCNPYTKRC
380 2 7.93e-13 C KGPGASCIRIAYNCC KYSCRNGKCS
440 2 1.55e-12 C LSPGSSCSPTSYNCC RSCNPYSRKC
439 2 1.55e-12 C LSPGSSCSPTSYNCC RSCNPYSRKC
355 2 3.25e-12 C KGKGAKASRLMYDAC
403 2 1.33e-11 C KSPGTPCSRGMRDCC TSCLSYSNKC
402 2 1.33e-11 C KSPGTPCSRGMRDCC TSCLLYSNKC
426 2 2.81e-11 C LGFGEACLMLYSDCC SYCVGAVCL
425 2 2.81e-11 C LGFGEACLMLYSDCC SYCVALVCL
383 2 7.36e-11 C KPPGSPCRVSSYNCC SSCKSYNKKC
424 2 1.01e-10 C LGFGEACLILYSDCC GYCVGAICL
343 2 1.27e-10 C KAAGKSCSRIAYNCC TGSCRSGKC
543 2 3.13e-10 C YGFGEACLVLYTDCC GYCVLAVCL
1387 2 1.63e-07 Q HGKISSEQHTMFDPI EGCCQQSCTT

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
343 1.27e-10
355 3.25e-12
357 1.33e-15
365 6.03e-16
372 4.22e-17
373 8.36e-15
374 2.77e-15
375 2.33e-18
376 2.91e-14
377 3.42e-17
379 8.21e-16
380 7.93e-13
381 1.56e-13
383 7.36e-11
390 1.26e-13
401 4.85e-13
402 1.33e-11
403 1.33e-11
404 1.26e-13
405 6.41e-15
424 1.01e-10
425 2.81e-11
426 2.81e-11
439 1.55e-12
440 1.55e-12
441 9.10e-14
456 3.58e-16
457 3.58e-16
458 2.40e-15
459 1.52e-15
543 3.13e-10
1387 1.63e-07
1552 3.58e-16
1607 4.22e-17
 
0
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Time 636.8 secs.

Motif 13

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Summary

Sequence Logo

E-value 1.3e-158
Width 14
Sites 21
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

A[FV]CNL[RK][RM]CQLSCRS

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
118 1 5.12e-18 AFCNLRMCQLSCRS LGLLGKCMGK
117 1 5.12e-18 AFCNLRMCQLSCRS LGLLGKCIGD
121 1 2.25e-17 AFCNLRRCQLSCRS LGLLGKCIGD
171 1 5.02e-17 AVCNLRRCQLSCRS LGLLGKCIGV
112 1 5.55e-17 AFCNLKMCQLSCRS LGLLGKCIGD
1589 1 1.19e-16 TFCNLRRCQLSCRS LGLLGKCIGV
170 1 1.19e-16 AVCNLKRCQLSCRS LGLLGKCMNG
169 1 1.19e-16 AVCNLKRCQLSCRS LGLLGKCIGD
1618 1 1.31e-16 TVCNLRMCQLSCRS LGLLGKCIGV
114 1 1.31e-16 AFCNLMRCQLSCRS LGLLGKCIGD
1620 1 1.47e-16 TVCNLRRCQLSCRS LGLLGKCIGV
1619 1 1.47e-16 TVCNLRRCQLSCRS LGLLGKCIGD
115 1 2.17e-16 AFCNLRKCQLSCRS LGLLGKCIGD
166 1 2.53e-16 AVCNLARCQLSCRS LGLLGKCIGD
113 1 2.97e-16 AFCNLLMCQLSCRS LGLLGKCIGD
116 1 3.36e-16 AFCNLRLCQLSCRS LGLLGKCIGD
120 1 5.56e-16 AFCNLRRCELSCRS LGLLGKCIGE
119 1 5.56e-16 AFCNLRRCELSCRS LGLLGKCIGE
168 1 1.54e-15 AVCNLKRCQLSCAS LGLLGKCIGD
165 1 5.19e-15 AVCNLARCQLSCAS LGLLGKCIGD
167 1 1.05e-14 AVCNLKRCPLSCRS LGLLGKCIGD

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
112 5.55e-17
113 2.97e-16
114 1.31e-16
115 2.17e-16
116 3.36e-16
117 5.12e-18
118 5.12e-18
119 5.56e-16
120 5.56e-16
121 2.25e-17
165 5.19e-15
166 2.53e-16
167 1.05e-14
168 1.54e-15
169 1.19e-16
170 1.19e-16
171 5.02e-17
1589 1.19e-16
1618 1.31e-16
1619 1.47e-16
1620 1.47e-16
 
0
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30

Time 685.5 secs.

Motif 14

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Summary

Sequence Logo

E-value 3.4e-147
Width 15
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CCS[DHN]P[AV]C[RS][GL]N[NH]PE[LMI]C

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1233 7 9.65e-16 MAVRGG CCSHPVCNLNNPQMC RGRR
1167 7 9.65e-16 LAVRGG CCSHPVCNLNNPQMC RGRR
1260 7 3.15e-15 MVVRGG CCSHPVCYFNNPQMC RGRR
1228 7 3.15e-15 LVVRGG CCSHPVCYFNNPQMC RGRR
51 16 3.19e-14 ASDLMALRDG CCSDPACSVNHPDIC GGGR
50 16 3.19e-14 ASDLMALRDG CCSDPACAVNHPDIC GGGR
276 1 2.35e-13 CCSNPACRVNNPHVC
1249 6 3.53e-13 MNVRG CCSHPVCRFNYPKYC GGRR
1201 6 3.53e-13 LNVRG CCSHPVCRFNYPKYC GGRR
1627 5 4.03e-13 TVRG FCSDPSCRFRNPELC DW
69 17 4.03e-13 TDLMARTVRG FCSDPSCRFRNPELC DWRR
627 3 9.65e-13 DE CCSNPACRLNNPHDC RRR
771 1 1.93e-12 FCSDPSCRFGNPELC DWRR
52 16 2.41e-12 ASDLMALRGG CCSRPPCILEHPEIC GRRR
53 16 2.69e-12 ASDLMALRGG CCSRPPCILKHPEIC GRRR
304 1 4.13e-12 CCSYPPCNVSYPEIC G
1625 6 4.58e-12 TVRDA CCSDPRCSGKHQDLC
854 2 4.58e-12 G CCSHPACSGNNREYC RES
12 18 4.58e-12 ALMKRTVRDA CCSDPRCSGKHQDLC G
9 18 4.58e-12 ALMELTVREG CCSDPRCSGKHQDLC S
849 2 6.25e-12 G CCSHPACAGSNAHIC
845 2 6.92e-12 G CCSFPACRKYRPEMC G
1626 6 8.46e-12 TVREA CCSDPRCSGQHQEKC
13 18 8.46e-12 ALMKRTVREA CCSDPRCSGQHQEKC G
770 1 1.03e-11 FCSDPPCRISNPESC GWEP
1110 5 1.14e-11 IRDE CCSNPACRVNAPHVC
74 17 1.38e-11 SELMALAVRG CCSNPACAGSNAHIC GRRR
41 13 1.52e-11 NAKLFDVRQS CCSTPPCALLYMEMC G
37 13 1.52e-11 NAKLFAVRQS CCSTPPCALLYMEMC G
876 2 1.84e-11 G CCSNPVCWQNNAEYC RES
273 1 2.45e-11 CCSDSDCNANHPDMC S
1132 2 3.88e-11 K CCSNPACNRYNPAIC D
1461 4 5.55e-11 RDP CCYHPTCNMSNPQIC
844 2 1.11e-10 G CCSFAACRKYRPEMC G
1464 3 2.37e-10 RG CCSYFDCRMMFPEMC GWR
802 2 3.02e-10 G CCDDPSCRAENPFLC SWM
277 1 3.27e-10 CCSNPVCHLEHSNLC TNGG
55 16 8.37e-10 ASNLMALRDE CCPNPPCKASNPDLC DWRS
795 2 1.77e-09 G CCARAACAGIHQELC GGRR
791 2 6.77e-09 G CCADPSCSILMPYFC I

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
9 4.58e-12
12 4.58e-12
13 8.46e-12
37 1.52e-11
41 1.52e-11
50 3.19e-14
51 3.19e-14
52 2.41e-12
53 2.69e-12
55 8.37e-10
69 4.03e-13
74 1.38e-11
273 2.45e-11
276 2.35e-13
277 3.27e-10
304 4.13e-12
627 9.65e-13
770 1.03e-11
771 1.93e-12
791 6.77e-09
795 1.77e-09
802 3.02e-10
844 1.11e-10
845 6.92e-12
849 6.25e-12
854 4.58e-12
876 1.84e-11
1110 1.14e-11
1132 3.88e-11
1167 9.65e-16
1201 3.53e-13
1228 3.15e-15
1233 9.65e-16
1249 3.53e-13
1260 3.15e-15
1461 5.55e-11
1464 2.37e-10
1625 4.58e-12
1626 8.46e-12
1627 4.03e-13
 
0
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25
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35

Time 735.6 secs.

Motif 15

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Summary

Sequence Logo

E-value 1.3e-123
Width 15
Sites 35
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

QCC[SD][LD][FA]C[NS][LT][AT]T[KSN][KTR]C[LV]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
503 13 3.77e-15 PAGGACDATT ECCILFCNLATKKCQ VPTFP
500 13 3.77e-15 PAGDACDATT ECCILFCNLATKKCQ VPTFP
1614 12 1.65e-14 RSGGACNSHN QCCDDFCSTATSTCV
738 14 1.65e-14 RSGGACYSHN QCCDDFCSTATSTCV
1613 12 2.73e-14 RSGGACNSHN QCCDDFCSTATSTCI
737 14 2.73e-14 RSGGACYSHN QCCDDFCSTATSTCI
733 14 2.73e-14 RSGGACNSHT QCCDDFCSTATSTCI
725 14 2.73e-14 HSGGACNSHT QCCDDFCSTATSTCI
502 13 1.65e-13 PAGDACDATT NCCILFCNLATKKCE VPTFP
499 13 1.65e-13 PAGDACDATT ECCILFCNLATKECQ VPAFP
732 14 1.89e-13 RSGGACNSHT QCCDDFCDTATRTCV
525 13 1.89e-13 SPGGACYSAS TCCSKACNLTTKRCV LS
735 14 2.16e-13 RSGGACNSHT QCCDHFCSTATSTCI
734 14 4.17e-13 RSGGACNSHT QCCDDFCSTATSTCT
501 13 6.08e-13 PAGDACDATT KCCIPFCNLATKKCQ VPTFP
487 13 6.08e-13 APGGACYADN TCCSNACNLNTKKCV LS
486 13 6.08e-13 APGGACYAAY TCCSNACNLNTKKCV LS
504 13 2.21e-12 PAGKACDATA TCCVLFCNLVTNKCQ VPRFP
1069 7 2.47e-12 HCTYHR HCCDLYCNKTTNVCL ET
516 13 5.26e-12 PRNGYCYYRY FCCSRACNLTIKRCL
1638 14 7.95e-12 PPEGYCTYHR DCCDLYCNKTTNVCL ET
515 13 1.08e-11 PRNGVCFYSY FCCSRACNPSTKRCL
512 13 1.94e-11 PPSGYCYHPY YCCSRACNLTRKRCL
1066 8 2.35e-11 GYCYHRY YCCSRACKLTTKRCL
674 14 2.58e-11 HSGGACNSHD QCCNAFCDTATRTCV
518 13 2.83e-11 PSGGACYVAS TCCSNACNLNSNKCV
505 13 2.83e-11 PGGEACDATT NCCFLTCNLATNKCR SPNFP
521 13 1.09e-10 QTNGACYHRD TCCSKSCNLTINRCL AS
514 13 1.30e-10 PRHGVCFYSY FCCSKACNPSSKRCL
449 13 3.25e-10 DPGGSCTRHY HCCQLYCNKQESVCL ENEPAF
718 14 3.82e-10 SPDESCTYHY NCCQLYCNKEENVCL ENSPEV
513 13 6.66e-10 PRHGVCFYSY FCCSKACNPSSKRCH
491 13 1.14e-09 HAYEACDATT NCCYMTCNLPTRKCR GPLF
1418 19 2.40e-09 PEATCGKLYL KCCSGMCNKANWKCL
511 13 8.54e-09 PPGGYCYHPD PCCSQYCNFPRKHCL

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
449 3.25e-10
486 6.08e-13
487 6.08e-13
491 1.14e-09
499 1.65e-13
500 3.77e-15
501 6.08e-13
502 1.65e-13
503 3.77e-15
504 2.21e-12
505 2.83e-11
511 8.54e-09
512 1.94e-11
513 6.66e-10
514 1.30e-10
515 1.08e-11
516 5.26e-12
518 2.83e-11
521 1.09e-10
525 1.89e-13
674 2.58e-11
718 3.82e-10
725 2.73e-14
732 1.89e-13
733 2.73e-14
734 4.17e-13
735 2.16e-13
737 2.73e-14
738 1.65e-14
1066 2.35e-11
1069 2.47e-12
1418 2.40e-09
1613 2.73e-14
1614 1.65e-14
1638 7.95e-12
 
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Time 776.2 secs.

Motif 16

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Summary

Sequence Logo

E-value 7.3e-116
Width 10
Sites 34
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Standard

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AA[KN][VA]KYS[KN]TP

Further Analysis

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Data Formats

View the motif in PSPM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
20 1 9.24e-14 AAKVKYSKTP EECCPNPPCF
19 1 9.24e-14 AAKVKYSKTP EECCPNPPCF
18 1 9.24e-14 AAKVKYSKTP EECCPNPPCF
17 1 9.24e-14 AAKVKYSKTP EECCPNPPCF
16 1 9.24e-14 AAKVKYSKTP EECCPNPPCF
15 1 9.24e-14 AAKVKYSKTP EECCPNPPCF
30 1 2.15e-13 AAKVKYSNTP EECCSNPPCF
29 1 2.15e-13 AAKVKYSNTP EECCSNPPCF
28 1 2.15e-13 AAKVKYSNTP EECCPNPPCF
27 1 2.15e-13 AAKVKYSNTP EECCPNPPCF
26 1 3.02e-13 AAKVKYSLTP AECCTNPPCF
25 1 3.02e-13 AAKVKYSLTP AECCTNPPCF
24 1 3.02e-13 AAKVKYSLTP AECCPNPPCF
23 1 3.02e-13 AAKVKYSLTP AECCPNPPCF
22 1 3.02e-13 AAKVKYSLTP AECCPNPPCF
21 1 3.02e-13 AAKVKYSLTP AECCPNPPCF
32 1 4.76e-12 AAKVKYSNTR EECCPNPPCF
31 1 4.76e-12 AAKVKYSNTR EECCPNPPCF
45 1 1.80e-09 AANAKLSERL DPCCREPPCA
44 1 1.80e-09 AANAKLSERL DPCCREPPCA
43 1 1.80e-09 AANAKLSERL DPCCRDPPCA
42 1 1.80e-09 AANAKLSERL DPCCRDPPCA
1538 7 4.38e-09 SNGRNA AADAKASQRI APFLRDYCCR
1537 7 4.38e-09 SNGRNA AADAKASQRI APFLRDYCCR
150 1 5.56e-09 APNVKDSKAS GSCCDNPSCA
149 1 5.56e-09 APNVKDSKAS GSCCDNPSCA
148 1 5.56e-09 APNVKDSKAS GSCCDNPSCA
147 1 5.56e-09 APNVKDSKAS GSCCDNPSCA
773 7 2.01e-08 FDGRNA AADAKVINTV ARIAWDICCS
1515 7 3.32e-08 SDGKSA AAKAKPSHLT APFIRDECCS
11 1 5.80e-08 AAKFKAPALM KRTDSEECCL
10 1 5.80e-08 AAKFKAPALM ERNVWEKCCL
1261 3 2.82e-07 NA AAKAFGLITP TVRKGCCSNP
925 10 4.94e-07 GCTPEYCSM WCKVKVSQNY CVKNCKCPGR

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
10 5.80e-08
11 5.80e-08
15 9.24e-14
16 9.24e-14
17 9.24e-14
18 9.24e-14
19 9.24e-14
20 9.24e-14
21 3.02e-13
22 3.02e-13
23 3.02e-13
24 3.02e-13
25 3.02e-13
26 3.02e-13
27 2.15e-13
28 2.15e-13
29 2.15e-13
30 2.15e-13
31 4.76e-12
32 4.76e-12
42 1.80e-09
43 1.80e-09
44 1.80e-09
45 1.80e-09
147 5.56e-09
148 5.56e-09
149 5.56e-09
150 5.56e-09
773 2.01e-08
925 4.94e-07
1261 2.82e-07
1515 3.32e-08
1537 4.38e-09
1538 4.38e-09
 
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35

Time 811.4 secs.

Motif 17

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Summary

Sequence Logo

E-value 2.8e-114
Width 15
Sites 19
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[VA][TD]E[EA]C[EN]E[YS]CE[DE][ER][EN]K[TH]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format