MEME

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use MEME in your research, please cite the following paper:
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.

Discovered Motifs   |   Block diagrams of Motifs   |   Program information   |   Explanation

Discovered Motifs

Motif Overview

Motif 1
  • 1.1e-252
  • 40 sites
Motif 1 Logo
Motif 2
  • 8.8e-196
  • 40 sites
Motif 2 Logo
Motif 3
  • 4.3e-195
  • 37 sites
Motif 3 Logo
Motif 4
  • 5.5e-138
  • 40 sites
Motif 4 Logo
Motif 5
  • 7.2e-184
  • 40 sites
Motif 5 Logo
Motif 6
  • 4.2e-172
  • 40 sites
Motif 6 Logo
Motif 7
  • 6.2e-159
  • 40 sites
Motif 7 Logo
Motif 8
  • 9.7e-150
  • 39 sites
Motif 8 Logo
Motif 9
  • 3.3e-138
  • 40 sites
Motif 9 Logo
Motif 10
  • 1.0e-134
  • 39 sites
Motif 10 Logo
Motif 11
  • 7.2e-123
  • 40 sites
Motif 11 Logo
Motif 12
  • 8.6e-129
  • 40 sites
Motif 12 Logo
Motif 13
  • 4.4e-120
  • 21 sites
Motif 13 Logo
Motif 14
  • 1.9e-111
  • 40 sites
Motif 14 Logo
Motif 15
  • 2.5e-115
  • 39 sites
Motif 15 Logo
Motif 16
  • 3.5e-093
  • 32 sites
Motif 16 Logo
Motif 17
  • 2.7e-095
  • 40 sites
Motif 17 Logo
Motif 18
  • 3.6e-091
  • 26 sites
Motif 18 Logo
Motif 19
  • 2.9e-085
  • 40 sites
Motif 19 Logo
Motif 20
  • 5.4e-085
  • 39 sites
Motif 20 Logo

Further Analysis

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Motif 1

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Summary

Sequence Logo

E-value 1.1e-252
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GAKCS[RK]LMYD

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1022 9 1.57e-13 GLPVCKGK GAKCSRLMYD CCTGSCRSGK
408 5 1.57e-13 CKYK GAKCSRLMYD CCSGSCSGTV
397 5 1.57e-13 CKSK GAKCSRLMYD CCSGSCSGTV
371 5 1.57e-13 CKGK GAKCSRLMYD CCTGSCRSGK
370 5 1.57e-13 CKGK GAKCSRLMYD CCTGSCRSGK
369 5 1.57e-13 CKGK GAKCSRLMYD CCTGSCRSGK
368 5 1.57e-13 CKGK GAKCSRLMYD CCTGSCRSGK
367 5 1.57e-13 CKGK GAKCSRLMYD CCTGSCRSGA
366 5 1.57e-13 CKGK GAKCSRLMYD CCTGSCASGK
365 5 1.57e-13 CKGK GAKCSRLMYD CC
349 5 1.57e-13 CKGA GAKCSRLMYD CCTGSCRSGK
348 5 1.57e-13 CKGA GAKCSRLMYD CCTGSCRSGK
180 5 1.57e-13 CAGK GAKCSRLMYD CCTGSCRSGK
179 5 1.57e-13 CAGA GAKCSRLMYD CCTGSCRSGK
1729 6 3.20e-13 YCKSK GAKCSKLMYD CCSGSCSGTV
470 5 3.20e-13 CRSK GAKCSKLMYD CCSGSCSGTV
395 5 3.20e-13 CKSK GAKCSKLMYD CCTGSCSGTV
394 5 3.20e-13 CKSK GAKCSKLMYD CCSGSCSGTV
393 5 3.20e-13 CKSK GAKCSKLMYD CCSGSCSGTV
392 5 3.20e-13 CKSK GAKCSKLMYD CCSGSCSGAV
389 5 4.23e-13 CKSK GAKCDRLMYD CCSGSCSGTV
359 5 8.25e-13 CKGK GAKCSLLMYD CCTGSCRSGK
388 5 1.26e-12 CKSK GAKCDKLMYD CCSGSCSGTV
363 5 1.26e-12 CKGK GAKCSRLMFD CCTGSCRSGK
358 5 1.26e-12 CKGK GAKCSALMYD CCTGSCRSGK
355 5 1.41e-12 CKGK GAKASRLMYD AC
361 5 1.74e-12 CKGK GAKCSRAMYD CCTGSCRSGK
399 5 2.43e-12 CKSK GARCSKLMYD CCSGSCSGTV
364 5 2.43e-12 CKGK GAKCSRLMYA CCTGSCRSGK
351 5 2.43e-12 CKGK GAACSRLMYD CCTGSCRSGK
346 5 2.43e-12 CKGA GAACSRLMYD CCTGSCRSGK
407 5 2.99e-12 CKYK GAKCSRLLYD CCSGSCSGTV
396 5 2.99e-12 CKSK GAKCSRLLYD CCSGSCSGTV
347 5 2.99e-12 CKGA GAKCSRLLYD CCTGSCRSGK
398 5 4.14e-12 CKSK GAQCSKLMYD CCSGSCSGTV
391 5 5.83e-12 CKSK GAKCSKLLYD CCSGSCSGTV
362 5 7.30e-12 CKGK GAKCSRLAYD CCTGSCRSGK
390 5 1.64e-11 CKSK GAKCSKLAYD CCSGSCSGTV
350 5 1.64e-11 CKGA GAKCSRLPYD CCTGSCRSGA
373 5 4.88e-11 CKGK GAPCTRLMYD CCHGSCSSSK

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
179 1.57e-13
180 1.57e-13
346 2.43e-12
347 2.99e-12
348 1.57e-13
349 1.57e-13
350 1.64e-11
351 2.43e-12
355 1.41e-12
358 1.26e-12
359 8.25e-13
361 1.74e-12
362 7.30e-12
363 1.26e-12
364 2.43e-12
365 1.57e-13
366 1.57e-13
367 1.57e-13
368 1.57e-13
369 1.57e-13
370 1.57e-13
371 1.57e-13
373 4.88e-11
388 1.26e-12
389 4.23e-13
390 1.64e-11
391 5.83e-12
392 3.20e-13
393 3.20e-13
394 3.20e-13
395 3.20e-13
396 2.99e-12
397 1.57e-13
398 4.14e-12
399 2.43e-12
407 2.99e-12
408 1.57e-13
470 3.20e-13
1022 1.57e-13
1729 3.20e-13
 
0
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Time 96.9 secs.

Motif 2

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Summary

Sequence Logo

E-value 8.8e-196
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[NH]PAC[RN]VNNP[HD]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1115 8 1.94e-13 IRDECCS NPACRVNNPH VCRRR
1114 8 1.94e-13 IRDECCS NPACRVNNPH VC
1113 8 1.94e-13 IRDECCS NPACRVNNPH AC
1104 8 1.94e-13 IRDECCA NPACRVNNPH VC
1103 8 1.94e-13 IRDACCS NPACRVNNPH VC
1101 8 1.94e-13 IRAECCS NPACRVNNPH VC
1078 8 1.94e-13 IADECCS NPACRVNNPH VC
689 5 1.94e-13 ECCS NPACRVNNPH VC
629 6 1.94e-13 DECCS NPACRVNNPH VCRRR
276 4 1.94e-13 CCS NPACRVNNPH VC
155 8 1.94e-13 ARDECCS NPACRVNNPH VC
107 6 1.94e-13 AECCS NPACRVNNPH VC
97 7 1.94e-13 ADECCS NPACRVNNPH VC
78 5 1.94e-13 ACCS NPACRVNNPH VC
851 5 6.33e-13 GCCS HPACNVNNPH ICG
850 5 6.33e-13 GCCS HPACNVNNPH IC
1107 8 1.42e-12 IRDECCS NPACAVNNPH VC
628 6 1.87e-12 DECCS NPACRLNNPH VCRRR
627 6 1.87e-12 DECCS NPACRLNNPH DCRRR
626 6 1.87e-12 DECCS NPACRLNNPH ACRRR
1460 7 3.31e-12 RDPCCS NPACNVNNPQ
653 6 3.31e-12 DPCCS NPACNVNNPQ IC
866 5 4.32e-12 GCCS NPACMVNNPQ IC
1108 8 4.82e-12 IRDECCS NPACRANNPH VC
1111 8 5.78e-12 IRDECCS NPACRVNNAH VC
1106 8 5.78e-12 IRDECCS NAACRVNNPH VC
1105 8 7.38e-12 IRDECCS APACRVNNPH VC
1112 8 1.33e-11 IRDECCS NPACRVNNPA VC
1109 8 1.99e-11 IRDECCS NPACRVANPH VC
1253 9 4.11e-10 MTIKGCCS DPSCNVNNPD YCG
1222 9 4.11e-10 LTIKGCCS DPSCNVNNPD YCG
1463 6 6.37e-10 RGCCS HPVCNLNNPQ MCR
846 5 8.30e-10 GCCS HPACAGNNPD IC
856 5 1.78e-09 GCCS HPPCAMNNPD YC
858 5 2.10e-09 GCCS HPPCFLNNPD YC
1473 7 2.49e-09 RPECCT HPACHVSNPE LC
1372 6 2.70e-09 QGCCS YPACAVSNPD ICGG
837 5 3.47e-09 GCCS DPRCNMNNPD YC
984 6 5.19e-09 GGCCS HPACFASNPD YC
1261 21 5.63e-09 TPTVRKGCCS NPACMLKNPN LC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
78 1.94e-13
97 1.94e-13
107 1.94e-13
155 1.94e-13
276 1.94e-13
626 1.87e-12
627 1.87e-12
628 1.87e-12
629 1.94e-13
653 3.31e-12
689 1.94e-13
837 3.47e-09
846 8.30e-10
850 6.33e-13
851 6.33e-13
856 1.78e-09
858 2.10e-09
866 4.32e-12
984 5.19e-09
1078 1.94e-13
1101 1.94e-13
1103 1.94e-13
1104 1.94e-13
1105 7.38e-12
1106 5.78e-12
1107 1.42e-12
1108 4.82e-12
1109 1.99e-11
1111 5.78e-12
1112 1.33e-11
1113 1.94e-13
1114 1.94e-13
1115 1.94e-13
1222 4.11e-10
1253 4.11e-10
1261 5.63e-09
1372 2.70e-09
1460 3.31e-12
1463 6.37e-10
1473 2.49e-09
 
0
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Time 274 secs.

Motif 3

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Summary

Sequence Logo

E-value 4.3e-195
Width 10
Sites 37
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

N[DN]KA[ST]DL[MI]AL

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
54 3 3.43e-14 AA NDKASDLMAL TVRGCCVYPP
53 3 3.43e-14 AA NDKASDLMAL RGGCCSRPPC
52 3 3.43e-14 AA NDKASDLMAL RGGCCSRPPC
51 3 3.43e-14 AA NDKASDLMAL RDGCCSDPAC
50 3 3.43e-14 AA NDKASDLMAL RDGCCSDPAC
130 3 5.57e-14 AG NDKATDLMAL TVRGCCSHPA
129 3 5.57e-14 AG NDKATDLMAL TVRGCCSHPA
1567 3 2.93e-13 TA NNKATDLMAL TVRGCCGNPS
162 3 2.93e-13 AT NNKATDLMAL TVRGCCDDPS
68 3 2.93e-13 AA NNKATDLMAL TVRGCCGNPS
67 3 2.93e-13 AA NNKATDLMAL TVRGCCDDPS
66 3 2.93e-13 AA NNKATDLMAL TVRGCCDDPP
65 3 2.93e-13 AA NNKATDLMAL TVRGCCAHLP
64 3 2.93e-13 AA NNKATDLMAL TVRGCCADPS
63 3 2.93e-13 AA NNKATDLMAL RYHECCKHPP
55 3 1.25e-12 AA NDKASNLMAL RDECCPNPPC
74 3 1.78e-12 AA SDKASELMAL AVRGCCSNPA
73 3 1.78e-12 AA SDKASELMAL AVRGCCSNLA
72 3 1.78e-12 AA SDKASELMAL AVRGCCSHPA
71 3 1.78e-12 AA SDKASELMAL AVRGCCSHPA
70 3 1.78e-12 AA SDKASELMAL AVRGCCSHPA
62 3 2.24e-12 AA NKKASDLMAL TVRGCCVYPP
59 3 2.41e-12 AA NDKASVQIAL TVQECCADSA
58 3 2.41e-12 AA NDKASVQIAL TVQECCADSA
57 3 2.41e-12 AA NDKASVQIAL TVQECCADAA
56 3 2.41e-12 AA NDKASVQIAL TVQECCADAA
69 3 8.80e-12 AA NNKATDLMAR TVRGFCSDPS
774 9 8.25e-11 FDGRNAPA DDKASDLIAQ IVRRACCSDR
48 3 1.09e-10 AA NDKASAWIAR TVRQSCCAAP
128 3 1.19e-10 AG NAKMSALMAL TIRGCCSHPV
1262 5 2.04e-10 NAAA NDKASDVIPL ALQGCCSNPV
47 3 2.89e-10 AA NDKAPVQIVL TVQECCADSA
46 3 2.89e-10 AA NDKAPVQIVL TVQECCADSA
1539 9 3.43e-10 SNGRNAAA DDKPSDWIAL AIKQCCANPP
61 3 4.06e-10 AA NDKTSAWIAW AGSQSCCATP
60 3 4.06e-10 AA NDKTSAWIAW AGSQSCCATP
1093 7 8.56e-10 IKNTAA SNKASSLVAL VVRGCCYNPV

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
46 2.89e-10
47 2.89e-10
48 1.09e-10
50 3.43e-14
51 3.43e-14
52 3.43e-14
53 3.43e-14
54 3.43e-14
55 1.25e-12
56 2.41e-12
57 2.41e-12
58 2.41e-12
59 2.41e-12
60 4.06e-10
61 4.06e-10
62 2.24e-12
63 2.93e-13
64 2.93e-13
65 2.93e-13
66 2.93e-13
67 2.93e-13
68 2.93e-13
69 8.80e-12
70 1.78e-12
71 1.78e-12
72 1.78e-12
73 1.78e-12
74 1.78e-12
128 1.19e-10
129 5.57e-14
130 5.57e-14
162 2.93e-13
774 8.25e-11
1093 8.56e-10
1262 2.04e-10
1539 3.43e-10
1567 2.93e-13
 
0
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35

Time 457.3 secs.

Motif 4

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Summary

Sequence Logo

E-value 5.5e-138
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[NH]P[PA]C[FA][AV][NT]H[PS][ED]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
983 6 1.13e-11 GGCCS HPACAVNHPE LC
742 6 1.45e-11 EECCP NPPCFATHSE ICG
31 16 1.45e-11 YSNTREECCP NPPCFATHSE ICGGRR
30 16 1.45e-11 YSNTPEECCS NPPCFATHSE ICGGRR
29 16 1.45e-11 YSNTPEECCS NPPCFATHSE ICG
28 16 1.45e-11 YSNTPEECCP NPPCFATHSE ICGVRR
27 16 1.45e-11 YSNTPEECCP NPPCFATHSE ICGV
16 16 1.45e-11 YSKTPEECCP NPPCFATHSE ICGGRR
15 16 1.45e-11 YSKTPEECCP NPPCFATHSE ICG
26 16 5.75e-11 YSLTPAECCT NPPCFAQHSD LCGARR
25 16 5.75e-11 YSLTPAECCT NPPCFAQHSD LCGA
22 16 5.75e-11 YSLTPAECCP NPPCFAQHSD LCGARR
21 16 5.75e-11 YSLTPAECCP NPPCFAQHSD LCGA
901 5 6.88e-11 GCCV YPPCAVNHPD ICRG
900 5 6.88e-11 GCCV YPPCAVNHPD IC
62 20 6.88e-11 MALTVRGCCV YPPCAVNHPD ICG
54 20 6.88e-11 MALTVRGCCV YPPCAVNHPD ICRGGR
1472 7 1.28e-10 RPECCT HPACHVSHPE LC
1141 6 1.28e-10 KECCT HPACHVSHPE LCG
855 5 1.28e-10 GCCS HPACSVNHPE LC
690 5 1.28e-10 ECCT HPACHVSHPE LC
640 6 1.48e-10 DGCCS DPACAVNHPD ICGG
1339 6 1.94e-10 PQCCS HPACNVDHPE ICD
1338 6 1.94e-10 PQCCS HPACNVDHPE IC
688 5 1.94e-10 ECCS HPACNVDHPE ICR
1262 22 2.52e-10 IPLALQGCCS NPVCHVDHPE LCL
604 6 2.84e-10 DDCCP DPACRQNHPE LCST
603 6 2.84e-10 DDCCP DPACRQNHPE ICPS
159 12 3.62e-10 SDAAHQGCCS NPVCHVEHPE LC
654 6 5.10e-10 DPCCS YPACGANHPE ICG
630 6 5.68e-10 DECCS NPPCAQAHPE VC
641 6 7.00e-10 DGCCS DPACSVNHPD ICGG
1258 9 1.05e-09 MTVRECCS QPPCRWKHPE LCS
1224 9 1.05e-09 LTVRECCS QPPCRWKHPE LCS
1758 7 1.28e-09 YHECCK NPPCRNKHPD LC
1340 6 2.93e-09 PRCCS NPACGAGHPE ICA
832 5 2.93e-09 GCCS DPPCRNKHPD LCG
831 5 6.44e-09 GCCS DPPCIANNPD LC
988 6 1.50e-08 GGCCS RPPCILEHPE IC
877 4 1.63e-08 GCC SPPCAANNPD YC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
15 1.45e-11
16 1.45e-11
21 5.75e-11
22 5.75e-11
25 5.75e-11
26 5.75e-11
27 1.45e-11
28 1.45e-11
29 1.45e-11
30 1.45e-11
31 1.45e-11
54 6.88e-11
62 6.88e-11
159 3.62e-10
603 2.84e-10
604 2.84e-10
630 5.68e-10
640 1.48e-10
641 7.00e-10
654 5.10e-10
688 1.94e-10
690 1.28e-10
742 1.45e-11
831 6.44e-09
832 2.93e-09
855 1.28e-10
877 1.63e-08
900 6.88e-11
901 6.88e-11
983 1.13e-11
988 1.50e-08
1141 1.28e-10
1224 1.05e-09
1258 1.05e-09
1262 2.52e-10
1338 1.94e-10
1339 1.94e-10
1340 2.93e-09
1472 1.28e-10
1758 1.28e-09
 
0
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35

Time 581.8 secs.

Motif 5

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Summary

Sequence Logo

E-value 7.2e-184
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

T[HRP][PS]GGAC[GN][SG]H

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1592 1 8.39e-13 THSGGACNSH DQCCNAFCST
725 3 8.39e-13 EC THSGGACNSH TQCCDDFCST
724 3 8.39e-13 EC THSGGACNSH NQCCNAFCDT
723 3 8.39e-13 EC THSGGACNSH DQCCNTFCDT
722 3 8.39e-13 EC THSGGACNSH DQCCNAFCDT
721 3 8.39e-13 EC THSGGACNSH DQCCNAFCDT
1614 1 7.10e-12 TRSGGACNSH NQCCDDFCST
1613 1 7.10e-12 TRSGGACNSH NQCCDDFCST
1612 1 7.10e-12 TRSGGACNSH DQCCINFCRK
1257 6 7.10e-12 MTMGC THPGGACGGH YHCCSQSCNT
924 3 7.10e-12 GC THPGGACGGH HHCCSLFCNT
736 3 7.10e-12 EC TRSGGACNSH TQCCNAFCDT
735 3 7.10e-12 EC TRSGGACNSH TQCCDHFCST
734 3 7.10e-12 EC TRSGGACNSH TQCCDDFCST
733 3 7.10e-12 EC TRSGGACNSH TQCCDDFCST
732 3 7.10e-12 EC TRSGGACNSH TQCCDDFCDT
731 3 7.10e-12 EC TRSGGACNSH DQCCNAFCDT
730 3 7.10e-12 EC TRSGGACNSH DQCCANFCRK
498 2 7.10e-12 C THPGGACGGH SHCCSLSCNT
497 2 7.10e-12 C THPGGACGGH HHCCSQSCNT
496 2 7.10e-12 C THPGGACGGH HHCCSQSCNT
495 2 7.10e-12 C THPGGACGGH HHCCSQFCNT
494 2 7.10e-12 C THPGGACGGH HHCCSLSCNT
493 2 7.10e-12 C THPGGACGGH HHCCSLFCNT
927 3 3.96e-11 GC TPPGGACGGH AHCCSQSCNI
926 3 3.96e-11 GC TPPGGACGGH AHCCSQSCDI
738 3 3.96e-11 EC TRSGGACYSH NQCCDDFCST
737 3 3.96e-11 EC TRSGGACYSH NQCCDDFCST
492 2 5.24e-11 C THPGGACGFY YHCCSNYCIT
727 3 6.37e-11 EC TPPGGACNIH PHCCEEFCDM
720 3 6.94e-11 EC TDSGGACNSH DQCCNEFCST
1256 6 7.49e-11 MTMGC THPGGACAGH HHCCSQSCNT
596 3 1.34e-10 DC TPPGGACGFY YHCCSNYCVT
595 3 1.34e-10 DC TPPGGACGFY YHCCSNYCIT
594 3 1.34e-10 DC TPPGGACGFY YHCCSNYCIT
728 3 1.55e-10 EC TPPGGACYYH SQCCGDFCQR
593 3 1.78e-10 DC TPPDGACGFH YHCCSKFCIT
506 2 1.78e-10 C TPPDGACGFH YHCCSKFCIT
509 2 4.57e-10 C TPPGGSCGGH AHCCSKSCNI
508 2 4.57e-10 C TPPGGACGVY YHCCSNYCIT

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
492 5.24e-11
493 7.10e-12
494 7.10e-12
495 7.10e-12
496 7.10e-12
497 7.10e-12
498 7.10e-12
506 1.78e-10
508 4.57e-10
509 4.57e-10
593 1.78e-10
594 1.34e-10
595 1.34e-10
596 1.34e-10
720 6.94e-11
721 8.39e-13
722 8.39e-13
723 8.39e-13
724 8.39e-13
725 8.39e-13
727 6.37e-11
728 1.55e-10
730 7.10e-12
731 7.10e-12
732 7.10e-12
733 7.10e-12
734 7.10e-12
735 7.10e-12
736 7.10e-12
737 3.96e-11
738 3.96e-11
924 7.10e-12
926 3.96e-11
927 3.96e-11
1256 7.49e-11
1257 7.10e-12
1592 8.39e-13
1612 7.10e-12
1613 7.10e-12
1614 7.10e-12
 
0
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Time 704.8 secs.

Motif 6

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Summary

Sequence Logo

E-value 4.2e-172
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[YN]PPC[FA]A[TS]NPD

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1254 9 2.43e-13 MTIKGCCS YPPCFATNPD CGRRR
1223 9 2.43e-13 LTIKGCCS YPPCFATNPD CGRRR
892 5 2.43e-13 GCCS YPPCFATNPD CGGAGGAG
891 5 2.43e-13 GCCS YPPCFATNPD CGGAAGG
890 5 2.43e-13 GCCS YPPCFATNPD CGGAAG
889 5 2.43e-13 GCCS YPPCFATNPD CGGAAAGG
888 5 2.43e-13 GCCS YPPCFATNPD CGGAA
887 5 2.43e-13 GCCS YPPCFATNPD CGAGAAG
886 5 2.43e-13 GCCS YPPCFATNPD CAGGG
885 5 2.43e-13 GCCS YPPCFATNPD CAGG
884 5 2.43e-13 GCCS YPPCFATNPD CAGAGA
883 5 2.43e-13 GCCS YPPCFATNPD CAG
882 5 2.43e-13 GCCS YPPCFATNPD CA
881 5 2.43e-13 GCCS YPPCFATNPD C
1752 6 1.80e-12 YGCCS YPPCFATNSD YC
894 5 1.80e-12 GCCS YPPCFATNSD YC
893 5 1.80e-12 GCCS YPPCFATNSD C
743 6 7.47e-12 EECCP NPPCFATNSD ICG
32 16 7.47e-12 YSNTREECCP NPPCFATNSD ICGGRR
20 16 7.47e-12 YSKTPEECCP NPPCFATNSD ICGGRR
19 16 7.47e-12 YSKTPEECCP NPPCFATNSD ICG
861 5 8.44e-11 GCCS LPPCAASNPD YC
605 6 8.44e-11 DDCCP NPPCKASNPD LCDWRS
55 19 8.44e-11 LMALRDECCP NPPCKASNPD LCDWRS
624 6 1.14e-10 DECCP DPPCKASNPD LCDWRS
860 5 1.27e-10 GCCS LPPCAANNPD YC
1276 6 4.82e-10 NECCD NPPCKSSNPD LCDWRS
863 5 7.72e-10 GCCS LPPCALSNPD YC
157 16 8.46e-10 AQAILRDCCS NPPCAHNNPD C
1177 7 1.01e-09 LDPCCR DPPCASTHID RC
42 16 1.01e-09 LSERLDPCCR DPPCASTHID RCG
862 5 1.11e-09 GCCS LPPCALNNPD YC
1178 7 1.21e-09 LDPCCR DPPCASTHTD ICT
880 5 1.21e-09 GCCS RPPCIANNPD LC
43 16 1.21e-09 LSERLDPCCR DPPCASTHTD ICTRRR
879 5 1.32e-09 GCCS RPPCALSNPD YC
1179 7 2.04e-09 LDPCCR EPPCASTHID RC
1180 7 2.42e-09 LDPCCR EPPCASTHTD ICT
770 4 2.78e-08 FCS DPPCRISNPE SCGWEP
1757 7 3.73e-08 YHECCK HPPCRNTRPD LCG

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
19 7.47e-12
20 7.47e-12
32 7.47e-12
42 1.01e-09
43 1.21e-09
55 8.44e-11
157 8.46e-10
605 8.44e-11
624 1.14e-10
743 7.47e-12
770 2.78e-08
860 1.27e-10
861 8.44e-11
862 1.11e-09
863 7.72e-10
879 1.32e-09
880 1.21e-09
881 2.43e-13
882 2.43e-13
883 2.43e-13
884 2.43e-13
885 2.43e-13
886 2.43e-13
887 2.43e-13
888 2.43e-13
889 2.43e-13
890 2.43e-13
891 2.43e-13
892 2.43e-13
893 1.80e-12
894 1.80e-12
1177 1.01e-09
1178 1.21e-09
1179 2.04e-09
1180 2.42e-09
1223 2.43e-13
1254 2.43e-13
1276 4.82e-10
1752 1.80e-12
1757 3.73e-08
 
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Time 862.9 secs.

Motif 7

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Summary

Sequence Logo

E-value 6.2e-159
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[HN]PACG[KQ][NH][YFT]SC

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
221 3 6.46e-13 CC HPACGQNYSC
1046 5 1.62e-12 GRCC HPACGQNFSC
1049 5 4.30e-12 GRCC HPACGQNTSC
1042 5 4.30e-12 GRCC HPACGKNYSC
953 5 4.30e-12 GECC HPACGQNTSC
681 4 4.30e-12 ECC HPACGQNTSC
220 3 4.30e-12 CC HPACGQNTSC
1287 6 9.34e-12 NGRCC HPACGKHFSC
680 4 9.34e-12 ECC HPACGKHFSC
650 6 9.34e-12 DGRCC HPACGKHFSC
1056 7 2.41e-11 GRGRCC HPACGPNYSC
1045 5 2.41e-11 GRCC HPACGPNYSC
174 5 2.41e-11 AYCC HPACGPNYSC GTSCS
1043 5 2.85e-11 GRCC HPACGKYYSC
1431 4 4.34e-11 RCC HPACGQQTSC
1288 6 4.34e-11 NGRCC HPACGKYFSC
1050 5 4.34e-11 GRCC HPACGQQTSC
1047 5 4.73e-11 GRCC HPACGQNTDC
219 3 4.73e-11 CC HPACGKHFNC
1727 4 6.70e-11 YCC HPACGKNFDC
173 5 6.70e-11 AYCC HPACGKNFDC
1051 5 7.83e-11 GRCC NPACGQNTSC
683 4 8.91e-11 ECC NPACGQHTSC
686 4 1.50e-10 ECC NPACGRHYSC KG
685 4 1.50e-10 ECC NPACGRHYSC GK
684 4 1.50e-10 ECC NPACGRHYSC
223 3 1.50e-10 CC HPACGRKYNC GR
222 3 1.50e-10 CC HPACGRKYNC
1041 5 1.66e-10 GRCC HPACGENTSC
1048 5 1.98e-10 GRCC HPACGQNTKC
1044 5 1.98e-10 GRCC HPACGNNTSC
1283 6 2.76e-10 NGRCC HPACAKYFSC GR
1282 6 2.76e-10 NGRCC HPACAKYFSC
649 6 2.98e-10 DGRCC HPACAKHFNC
1080 4 4.13e-10 ICC NPACGPKYSC
797 5 4.13e-10 GCCC NPACGPKYSC
748 5 4.13e-10 EICC NPACGPKYSC
1284 6 6.70e-10 NGRCC HPACARKYNC
175 5 8.60e-10 AYCC HPVCGKNFDC
224 3 2.28e-09 CC HPSCGRKYNC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
173 6.70e-11
174 2.41e-11
175 8.60e-10
219 4.73e-11
220 4.30e-12
221 6.46e-13
222 1.50e-10
223 1.50e-10
224 2.28e-09
649 2.98e-10
650 9.34e-12
680 9.34e-12
681 4.30e-12
683 8.91e-11
684 1.50e-10
685 1.50e-10
686 1.50e-10
748 4.13e-10
797 4.13e-10
953 4.30e-12
1041 1.66e-10
1042 4.30e-12
1043 2.85e-11
1044 1.98e-10
1045 2.41e-11
1046 1.62e-12
1047 4.73e-11
1048 1.98e-10
1049 4.30e-12
1050 4.34e-11
1051 7.83e-11
1056 2.41e-11
1080 4.13e-10
1282 2.76e-10
1283 2.76e-10
1284 6.70e-10
1287 9.34e-12
1288 4.34e-11
1431 4.34e-11
1727 6.70e-11
 
0
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14
16
18

Time 995.1 secs.

Motif 8

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Summary

Sequence Logo

E-value 9.7e-150
Width 10
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CCTGSCRSGK

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1022 19 2.73e-11 GAKCSRLMYD CCTGSCRSGK CTRG
371 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK CTRNGLPG
370 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK CTRNG
369 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK CG
368 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK C
364 15 2.73e-11 GAKCSRLMYA CCTGSCRSGK C
363 15 2.73e-11 GAKCSRLMFD CCTGSCRSGK C
362 15 2.73e-11 GAKCSRLAYD CCTGSCRSGK C
361 15 2.73e-11 GAKCSRAMYD CCTGSCRSGK C
359 15 2.73e-11 GAKCSLLMYD CCTGSCRSGK C
358 15 2.73e-11 GAKCSALMYD CCTGSCRSGK C
357 15 2.73e-11 GAKCRKTSYD CCTGSCRSGK C
351 15 2.73e-11 GAACSRLMYD CCTGSCRSGK C
349 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK CG
348 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK C
347 15 2.73e-11 GAKCSRLLYD CCTGSCRSGK C
346 15 2.73e-11 GAACSRLMYD CCTGSCRSGK C
343 15 2.73e-11 GKSCSRIAYN CCTGSCRSGK C
307 1 2.73e-11 CCTGSCRSGK C
180 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK C
179 15 2.73e-11 GAKCSRLMYD CCTGSCRSGK C
459 15 5.34e-11 GASCRRTSYD CCTGSCRSGR C
458 15 5.34e-11 GASCRKTSYD CCTGSCRSGR C
404 15 5.34e-11 GASCRRTPYD CCTGSCRSGR C
376 15 5.34e-11 GASCRRTSYG CCTGSCRSGR C
1314 17 1.03e-10 GAKCSRLPYD CCTGSCRSGA C
1270 16 1.03e-10 GAKCSRLPYD CCTGSCRSGA CG
367 15 1.03e-10 GAKCSRLMYD CCTGSCRSGA C
350 15 1.03e-10 GAKCSRLPYD CCTGSCRSGA C
457 15 6.73e-10 GASCRKTMYN CCSGSCRSGR C
366 15 6.73e-10 GAKCSRLMYD CCTGSCASGK C
375 15 1.15e-09 GASCRKTMYD CCRGSCRSGR C
377 15 2.32e-09 GASCSRTMYN CCTGSCNRGK C
374 15 2.32e-09 GASCHRTSYD CCTGSCNRGK C
1623 11 3.87e-09 TVKCGGCNRK CCAGGCRSGK CINGKCQCY
1624 11 5.13e-09 TVKCGGCNRK CCPGGCRSGK CINGKCQCY
405 15 9.58e-09 GASCRRTSYD CCTGSCDRGR C
380 15 4.18e-08 GASCIRIAYN CCKYSCRNGK CS
1158 11 5.91e-08 KPKCGLCRYR CCSGGCSSGK CVNGACDCS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
179 2.73e-11
180 2.73e-11
307 2.73e-11
343 2.73e-11
346 2.73e-11
347 2.73e-11
348 2.73e-11
349 2.73e-11
350 1.03e-10
351 2.73e-11
357 2.73e-11
358 2.73e-11
359 2.73e-11
361 2.73e-11
362 2.73e-11
363 2.73e-11
364 2.73e-11
366 6.73e-10
367 1.03e-10
368 2.73e-11
369 2.73e-11
370 2.73e-11
371 2.73e-11
374 2.32e-09
375 1.15e-09
376 5.34e-11
377 2.32e-09
380 4.18e-08
404 5.34e-11
405 9.58e-09
457 6.73e-10
458 5.34e-11
459 5.34e-11
1022 2.73e-11
1158 5.91e-08
1270 1.03e-10
1314 1.03e-10
1623 3.87e-09
1624 5.13e-09
 
0
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Time 1056.4 secs.

Motif 9

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Summary

Sequence Logo

E-value 3.3e-138
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CCSGWC[FIL]F[VA]C

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
923 17 5.02e-12 EFCGTLYEER CCSGWCFFVC V
739 19 5.02e-12 FCGFPKIGEP CCSGWCFFVC A
599 18 5.02e-12 FCGFPKIGGP CCSGWCFFVC A
1639 18 1.05e-11 FCGFPKIGGP CCSGWCIFVC L
541 14 1.05e-11 SGTSCNTGNQ CCSGWCIFVC L
539 14 1.05e-11 GGTSCDSGIQ CCSGWCIFVC L
538 14 1.05e-11 GGTSCDSGIQ CCSGWCIFVC F
537 14 1.05e-11 GGTGCDSGNQ CCSGWCIFVC L
1637 19 1.86e-11 CGFGLFGGPL CCSGWCLFVC L
585 18 1.86e-11 VCGFPKPEPH CCSGWCLFVC A
1746 19 3.24e-11 FCGMIKVGPP CCSGWCFFAC A
1745 19 3.24e-11 FCGMIKIGPP CCSGWCFFAC A
1325 2 3.24e-11 P CCSGWCFFAC A
1200 24 3.24e-11 FCGMIKIGPP CCSGWCFFAC A
669 20 3.24e-11 FCGMIKIGPP CCSGWCFFAC A
617 20 3.24e-11 FCGMIKIGPP CCSGWCFFAC A
606 19 3.24e-11 FCGMIKIGPP CCSGWCFFAC A
536 14 4.39e-11 GGTGCDSGNQ CCSGWCIFAC L
1360 17 1.03e-10 EICGMLFEAQ CCDGWCFFVC M
466 17 1.37e-10 ICGFPKPGPY CCSGWCFVVC L
600 18 1.79e-10 ACGFPKPEPA CCSSWCIFVC T
540 14 1.79e-10 GGTSCNTGNQ CCSGWCIFLC L
1198 22 2.23e-10 FCAWPILGPL CCSGWCLYVC M
1191 24 3.34e-10 NCGFPKLGGP CCSGLCFFVC A
542 14 3.34e-10 SGTSCNTGNQ CCSGWCIFVS CL
467 17 4.34e-10 VCGFPKPGPY CCSGWCFAVC LPV
1683 23 7.45e-10 EVCRRYEFVG CCSGKCFFVC S
1176 23 1.05e-09 CGFVVMLNYL CCSGRCIFVC V
1367 19 1.27e-09 FCGFPKIGGP CCSGWCLGVC A
1174 23 1.27e-09 CGISVFASFL CCSGLCVFVC I
1173 23 2.07e-09 CGISVFGSYL CCSGRCVFVC I
917 19 2.07e-09 CGIPFVNNGL CCSGNCVFVC TPQ
916 19 2.07e-09 CGIPFANNGL CCSGNCVFVC TPQ
700 19 2.29e-09 CVLPFVGNGM CCSGICVFVC IAQKY
1214 19 8.38e-09 DLCFPSDRIQ CCSGKCTFVC M
530 15 9.00e-09 GDFCGPGYEE CCSGFCLYVC I
1128 19 1.18e-08 CVIPIIGNVF CCKGYCLFVC IS
918 19 1.18e-08 CGFSMIGALL CCSGWCLGIC MT
1197 23 1.47e-08 CGFNIIGAFL CCSGYCLVVC M
529 15 5.87e-08 GEFCGPGFGD CCTGFCLLVC I

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
466 1.37e-10
467 4.34e-10
529 5.87e-08
530 9.00e-09
536 4.39e-11
537 1.05e-11
538 1.05e-11
539 1.05e-11
540 1.79e-10
541 1.05e-11
542 3.34e-10
585 1.86e-11
599 5.02e-12
600 1.79e-10
606 3.24e-11
617 3.24e-11
669 3.24e-11
700 2.29e-09
739 5.02e-12
916 2.07e-09
917 2.07e-09
918 1.18e-08
923 5.02e-12
1128 1.18e-08
1173 2.07e-09
1174 1.27e-09
1176 1.05e-09
1191 3.34e-10
1197 1.47e-08
1198 2.23e-10
1200 3.24e-11
1214 8.38e-09
1325 3.24e-11
1360 1.03e-10
1367 1.27e-09
1637 1.86e-11
1639 1.05e-11
1683 7.45e-10
1745 3.24e-11
1746 3.24e-11
 
0
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Time 1149.2 secs.

Motif 10

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Summary

Sequence Logo

E-value 1.0e-134
Width 10
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AA[KN][VA]K[YA]SK[TL]P

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
20 1 1.98e-13 AAKVKYSKTP EECCPNPPCF
19 1 1.98e-13 AAKVKYSKTP EECCPNPPCF
18 1 1.98e-13 AAKVKYSKTP EECCPNPPCF
17 1 1.98e-13 AAKVKYSKTP EECCPNPPCF
16 1 1.98e-13 AAKVKYSKTP EECCPNPPCF
15 1 1.98e-13 AAKVKYSKTP EECCPNPPCF
30 1 3.21e-13 AAKVKYSNTP EECCSNPPCF
29 1 3.21e-13 AAKVKYSNTP EECCSNPPCF
28 1 3.21e-13 AAKVKYSNTP EECCPNPPCF
27 1 3.21e-13 AAKVKYSNTP EECCPNPPCF
26 1 5.67e-13 AAKVKYSLTP AECCTNPPCF
25 1 5.67e-13 AAKVKYSLTP AECCTNPPCF
24 1 5.67e-13 AAKVKYSLTP AECCPNPPCF
23 1 5.67e-13 AAKVKYSLTP AECCPNPPCF
22 1 5.67e-13 AAKVKYSLTP AECCPNPPCF
21 1 5.67e-13 AAKVKYSLTP AECCPNPPCF
32 1 1.04e-11 AAKVKYSNTR EECCPNPPCF
31 1 1.04e-11 AAKVKYSNTR EECCPNPPCF
14 1 2.64e-10 AAKFKAPALM KRTVSQECCL
13 1 2.64e-10 AAKFKAPALM KRTVREACCS
12 1 2.64e-10 AAKFKAPALM KRTVRDACCS
11 1 2.64e-10 AAKFKAPALM KRTDSEECCL
10 1 2.64e-10 AAKFKAPALM ERNVWEKCCL
9 1 2.64e-10 AAKFKAPALM ELTVREGCCS
8 1 2.64e-10 AAKFKAPALM ELTVRDECCS
45 1 3.10e-09 AANAKLSERL DPCCREPPCA
44 1 3.10e-09 AANAKLSERL DPCCREPPCA
43 1 3.10e-09 AANAKLSERL DPCCRDPPCA
42 1 3.10e-09 AANAKLSERL DPCCRDPPCA
1538 7 3.93e-09 SNGRNA AADAKASQRI APFLRDYCCR
1537 7 3.93e-09 SNGRNA AADAKASQRI APFLRDYCCR
150 1 1.07e-08 APNVKDSKAS GSCCDNPSCA
149 1 1.07e-08 APNVKDSKAS GSCCDNPSCA
148 1 1.07e-08 APNVKDSKAS GSCCDNPSCA
147 1 1.07e-08 APNVKDSKAS GSCCDNPSCA
1515 7 2.21e-08 SDGKSA AAKAKPSHLT APFIRDECCS
773 7 2.94e-08 FDGRNA AADAKVINTV ARIAWDICCS
1261 3 3.54e-07 NA AAKAFGLITP TVRKGCCSNP
925 10 6.46e-07 GCTPEYCSM WCKVKVSQNY CVKNCKCPGR

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 2.64e-10
9 2.64e-10
10 2.64e-10
11 2.64e-10
12 2.64e-10
13 2.64e-10
14 2.64e-10
15 1.98e-13
16 1.98e-13
17 1.98e-13
18 1.98e-13
19 1.98e-13
20 1.98e-13
21 5.67e-13
22 5.67e-13
23 5.67e-13
24 5.67e-13
25 5.67e-13
26 5.67e-13
27 3.21e-13
28 3.21e-13
29 3.21e-13
30 3.21e-13
31 1.04e-11
32 1.04e-11
42 3.10e-09
43 3.10e-09
44 3.10e-09
45 3.10e-09
147 1.07e-08
148 1.07e-08
149 1.07e-08
150 1.07e-08
773 2.94e-08
925 6.46e-07
1261 3.54e-07
1515 2.21e-08
1537 3.93e-09
1538 3.93e-09
 
0
5
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Time 1209.3 secs.

Motif 11

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Summary

Sequence Logo

E-value 7.2e-123
Width 10
Sites 40
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PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

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   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GKC[IM][GN]DKC[EK]C

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1619 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
169 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKA
168 19 2.26e-11 QLSCASLGLL GKCIGDKCEC VKH
167 19 2.26e-11 PLSCRSLGLL GKCIGDKCEC VKH
166 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
165 19 2.26e-11 QLSCASLGLL GKCIGDKCEC VKH
121 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
117 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
116 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
115 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
114 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
113 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
112 19 2.26e-11 QLSCRSLGLL GKCIGDKCEC VKH
1681 22 9.82e-11 PCRKQTGCPY GKCMNRKCKC NRC
1394 22 9.82e-11 NFCRKNKCTH GKCMNRKCKC FNCK
158 22 9.82e-11 PCRKETGCPY GKCMNRKCKC NRC
1620 19 1.30e-10 QLSCRSLGLL GKCIGVKCEC VKH
1618 19 1.30e-10 QLSCRSLGLL GKCIGVKCEC VKH
1589 19 1.30e-10 QLSCRSLGLL GKCIGVKCEC VKH
171 19 1.30e-10 QLSCRSLGLL GKCIGVKCEC VKH
170 19 1.30e-10 QLSCRSLGLL GKCMNGKCEC VKH
1604 24 4.13e-10 VCQRLHNTSR GKCMNKKCRC YS
1320 23 4.13e-10 VCQRLHNTSR GKCMNKKCRC YS
528 20 4.13e-10 VCQRLHNTSR GKCMNKKCRC YS
3 20 4.96e-10 VKCVAMGFSS GKCINSKCKC YK
118 19 6.15e-10 QLSCRSLGLL GKCMGKKCRC VKH
1319 22 7.16e-10 KPCKDAGMRF GKCMNRKCHC TPK
1756 7 1.21e-09 YGSSAG AKCMNGKCKC YNN
526 21 1.21e-09 CKAQFGQSAG AKCMNGKCKC
83 13 1.66e-09 GSCRKKCKGS GKCINGRCKC Y
82 13 1.66e-09 GSCRKKCKGP GKCINGRCKC Y
120 19 4.10e-09 ELSCRSLGLL GKCIGEECKC VPY
119 19 4.10e-09 ELSCRSLGLL GKCIGEECKC VPH
1630 20 4.42e-09 KDCTSRKYRS GKCINNACKC YPY
172 20 4.42e-09 KDCKRRGYRS GKCINNACKC YPYGK
1415 26 1.23e-08 VCRKAIGVAA GKCINGRCVC
1090 22 1.70e-08 PCKKETGCPR AKCINRNCKC YGCS
1226 23 2.15e-08 PCQQQTGCPN SKCINRMCKC YGC
1102 22 2.45e-08 PCMKQTGCPN AKCINKSCKC YGC
326 23 5.57e-07 SKCATCCGGR GKCVGPQCLC NRI

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
3 4.96e-10
82 1.66e-09
83 1.66e-09
112 2.26e-11
113 2.26e-11
114 2.26e-11
115 2.26e-11
116 2.26e-11
117 2.26e-11
118 6.15e-10
119 4.10e-09
120 4.10e-09
121 2.26e-11
158 9.82e-11
165 2.26e-11
166 2.26e-11
167 2.26e-11
168 2.26e-11
169 2.26e-11
170 1.30e-10
171 1.30e-10
172 4.42e-09
326 5.57e-07
526 1.21e-09
528 4.13e-10
1090 1.70e-08
1102 2.45e-08
1226 2.15e-08
1319 7.16e-10
1320 4.13e-10
1394 9.82e-11
1415 1.23e-08
1589 1.30e-10
1604 4.13e-10
1618 1.30e-10
1619 2.26e-11
1620 1.30e-10
1630 4.42e-09
1681 9.82e-11
1756 1.21e-09
 
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Time 1268.2 secs.

Motif 12

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Summary

Sequence Logo

E-value 8.6e-129
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CS[HN]PACAGNN

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1232 7 3.35e-12 MAVRGC CSHPACAGNN PHICGRRR
1166 7 3.35e-12 LAVRGC CSHPACAGNN PHICGRRR
848 3 3.35e-12 GC CSHPACAGNN PHICS
847 3 3.35e-12 GC CSHPACAGNN PHIC
130 18 3.35e-12 DLMALTVRGC CSHPACAGNN PHICS
129 18 3.35e-12 DLMALTVRGC CSHPACAGNN PHICG
71 18 3.35e-12 ELMALAVRGC CSHPACAGNN PHICGRRR
70 18 3.35e-12 ELMALAVRGC CSHPACAGNN PDICG
1146 4 1.59e-11 KGC CSNPACAGNN PHVCRQ
982 4 3.95e-11 GGC CSHPACAANN QDYC
857 3 6.26e-11 GC CSHPPCAQNN QDYC
1260 8 6.58e-11 MVVRGGC CSHPVCYFNN PQMCRGRR
1228 8 6.58e-11 LVVRGGC CSHPVCYFNN PQMCRGRR
986 4 6.58e-11 GGC CSHPVCYFNN PQMCR
1233 8 9.91e-11 MAVRGGC CSHPVCNLNN PQMCRGRR
1167 8 9.91e-11 LAVRGGC CSHPVCNLNN PQMCRGRR
985 4 9.91e-11 GGC CSHPVCNLNN PQMCR
854 3 9.91e-11 GC CSHPACSGNN REYCRES
853 3 9.91e-11 GC CSHPACSGNN PEFCRQ
849 3 2.13e-10 GC CSHPACAGSN AHIC
72 18 2.13e-10 ELMALAVRGC CSHPACAGSN AHICGRRR
865 3 5.06e-10 GC CSNPACAGSN AHIC
150 14 5.06e-10 VKDSKASGSC CDNPSCAVNN SHCGRRR
149 14 5.06e-10 VKDSKASGSC CDNPSCAVNN SHC
148 14 5.06e-10 VKDSKASGSC CDNPSCAVNN RHCGRRR
147 14 5.06e-10 VKDSKASGSC CDNPSCAVNN RHC
74 18 5.06e-10 ELMALAVRGC CSNPACAGSN AHICGRRR
876 3 5.61e-10 GC CSNPVCWQNN AEYCRES
864 3 6.93e-10 GC CSNLACAGNN LHIC
50 17 6.93e-10 SDLMALRDGC CSDPACAVNH PDICGGGR
868 3 1.48e-09 GC CSNPPCYANN QAYCN
51 17 4.54e-09 SDLMALRDGC CSDPACSVNH PDICGGGR
1132 3 4.95e-09 KC CSNPACNRYN PAICD
1131 3 4.95e-09 KC CSNPACNRYN KLC
5 18 5.83e-09 DWISLVTPEC CSNPPCNLQN CR
4 18 5.83e-09 DWISLVTPEC CSNPPCNLQN C
990 4 1.33e-08 GGC CSYPPCAVSN PQHC
631 4 2.26e-08 DEC CSNPSCAQTH PEVC
1627 6 7.37e-08 TVRGF CSDPSCRFRN PELCDW
771 2 1.03e-07 F CSDPSCRFGN PELCDWRR

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
4 5.83e-09
5 5.83e-09
50 6.93e-10
51 4.54e-09
70 3.35e-12
71 3.35e-12
72 2.13e-10
74 5.06e-10
129 3.35e-12
130 3.35e-12
147 5.06e-10
148 5.06e-10
149 5.06e-10
150 5.06e-10
631 2.26e-08
771 1.03e-07
847 3.35e-12
848 3.35e-12
849 2.13e-10
853 9.91e-11
854 9.91e-11
857 6.26e-11
864 6.93e-10
865 5.06e-10
868 1.48e-09
876 5.61e-10
982 3.95e-11
985 9.91e-11
986 6.58e-11
990 1.33e-08
1131 4.95e-09
1132 4.95e-09
1146 1.59e-11
1166 3.35e-12
1167 9.91e-11
1228 6.58e-11
1232 3.35e-12
1233 9.91e-11
1260 6.58e-11
1627 7.37e-08
 
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Time 1359.5 secs.

Motif 13

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Summary

Sequence Logo

E-value 4.4e-120
Width 10
Sites 21
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

QLSCRSLGLL

Further Analysis

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Data Formats

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     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1620 9 4.72e-13 TVCNLRRC QLSCRSLGLL GKCIGVKCEC
1619 9 4.72e-13 TVCNLRRC QLSCRSLGLL GKCIGDKCEC
1618 9 4.72e-13 TVCNLRMC QLSCRSLGLL GKCIGVKCEC
1589 9 4.72e-13 TFCNLRRC QLSCRSLGLL GKCIGVKCEC
171 9 4.72e-13 AVCNLRRC QLSCRSLGLL GKCIGVKCEC
170 9 4.72e-13 AVCNLKRC QLSCRSLGLL GKCMNGKCEC
169 9 4.72e-13 AVCNLKRC QLSCRSLGLL GKCIGDKCEC
166 9 4.72e-13 AVCNLARC QLSCRSLGLL GKCIGDKCEC
121 9 4.72e-13 AFCNLRRC QLSCRSLGLL GKCIGDKCEC
118 9 4.72e-13 AFCNLRMC QLSCRSLGLL GKCMGKKCRC
117 9 4.72e-13 AFCNLRMC QLSCRSLGLL GKCIGDKCEC
116 9 4.72e-13 AFCNLRLC QLSCRSLGLL GKCIGDKCEC
115 9 4.72e-13 AFCNLRKC QLSCRSLGLL GKCIGDKCEC
114 9 4.72e-13 AFCNLMRC QLSCRSLGLL GKCIGDKCEC
113 9 4.72e-13 AFCNLLMC QLSCRSLGLL GKCIGDKCEC
112 9 4.72e-13 AFCNLKMC QLSCRSLGLL GKCIGDKCEC
168 9 1.01e-12 AVCNLKRC QLSCASLGLL GKCIGDKCEC
165 9 1.01e-12 AVCNLARC QLSCASLGLL GKCIGDKCEC
120 9 1.80e-12 AFCNLRRC ELSCRSLGLL GKCIGEECKC
119 9 1.80e-12 AFCNLRRC ELSCRSLGLL GKCIGEECKC
167 9 1.02e-11 AVCNLKRC PLSCRSLGLL GKCIGDKCEC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
112 4.72e-13
113 4.72e-13
114 4.72e-13
115 4.72e-13
116 4.72e-13
117 4.72e-13
118 4.72e-13
119 1.80e-12
120 1.80e-12
121 4.72e-13
165 1.01e-12
166 4.72e-13
167 1.02e-11
168 1.01e-12
169 4.72e-13
170 4.72e-13
171 4.72e-13
1589 4.72e-13
1618 4.72e-13
1619 4.72e-13
1620 4.72e-13
 
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Time 1417.5 secs.

Motif 14

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Summary

Sequence Logo

E-value 1.9e-111
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

FC[SND]TAT[SRN]TC[VNQ]

Further Analysis

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Data Formats

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     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
736 19 3.87e-12 CNSHTQCCNA FCDTATRTCV
732 19 3.87e-12 CNSHTQCCDD FCDTATRTCV
731 19 3.87e-12 CNSHDQCCNA FCDTATRTCV
724 19 3.87e-12 CNSHNQCCNA FCDTATRTCV
723 19 3.87e-12 CNSHDQCCNT FCDTATRTCV
722 19 3.87e-12 CNSHDQCCNA FCDTATRTCV
674 19 3.87e-12 CNSHDQCCNA FCDTATRTCV
1592 17 6.34e-12 CNSHDQCCNA FCSTATRTCV
1614 17 8.67e-12 CNSHNQCCDD FCSTATSTCV
738 19 8.67e-12 CYSHNQCCDD FCSTATSTCV
720 19 1.66e-11 CNSHDQCCNE FCSTATRTCI
1613 17 2.13e-11 CNSHNQCCDD FCSTATSTCI
737 19 2.13e-11 CYSHNQCCDD FCSTATSTCI
735 19 2.13e-11 CNSHTQCCDH FCSTATSTCI
733 19 2.13e-11 CNSHTQCCDD FCSTATSTCI
725 19 2.13e-11 CNSHTQCCDD FCSTATSTCI
721 19 1.38e-10 CNSHDQCCNA FCDTATRACV
734 19 2.15e-10 CNSHTQCCDD FCSTATSTCT
503 18 1.06e-09 CDATTECCIL FCNLATKKCQ VPTFP
501 18 1.06e-09 CDATTKCCIP FCNLATKKCQ VPTFP
500 18 1.06e-09 CDATTECCIL FCNLATKKCQ VPTFP
924 19 1.31e-09 CGGHHHCCSL FCNTAANACN
495 18 1.31e-09 CGGHHHCCSQ FCNTAANACN
493 18 1.31e-09 CGGHHHCCSL FCNTAANACN
1612 17 3.65e-09 CNSHDQCCIN FCRKATSTCM
730 19 3.65e-09 CNSHDQCCAN FCRKATSTCM
499 18 3.65e-09 CDATTECCIL FCNLATKECQ VPAFP
506 18 5.79e-09 CGFHYHCCSK FCITVSSTCN
504 18 6.35e-09 CDATATCCVL FCNLVTNKCQ VPRFP
593 19 1.06e-08 CGFHYHCCSK FCITISSTCN
502 18 1.15e-08 CDATTNCCIL FCNLATKKCE VPTFP
489 18 1.15e-08 CGNPGHCCSK FCITTSSTCN
763 24 1.36e-08 CTGHSDCCSD FCSTMSDVCQ
483 18 1.36e-08 CFGPAACCSN FCSTMSDVCQ ENWSG
497 18 2.25e-08 CGGHHHCCSQ SCNTAATTCN
498 18 4.31e-08 CGGHSHCCSL SCNTAANSCN
496 18 4.31e-08 CGGHHHCCSQ SCNTAANSCN
482 18 4.66e-08 CFGPAACCSN FCSTLSDVCQ ESWSG
928 19 1.56e-07 CGYHSHCCSN FCHTWANVCL
727 19 3.41e-07 CNIHPHCCEE FCDMANNRCL EM

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
482 4.66e-08
483 1.36e-08
489 1.15e-08
493 1.31e-09
495 1.31e-09
496 4.31e-08
497 2.25e-08
498 4.31e-08
499 3.65e-09
500 1.06e-09
501 1.06e-09
502 1.15e-08
503 1.06e-09
504 6.35e-09
506 5.79e-09
593 1.06e-08
674 3.87e-12
720 1.66e-11
721 1.38e-10
722 3.87e-12
723 3.87e-12
724 3.87e-12
725 2.13e-11
727 3.41e-07
730 3.65e-09
731 3.87e-12
732 3.87e-12
733 2.13e-11
734 2.15e-10
735 2.13e-11
736 3.87e-12
737 2.13e-11
738 8.67e-12
763 1.36e-08
924 1.31e-09
928 1.56e-07
1592 6.34e-12
1612 3.65e-09
1613 2.13e-11
1614 8.67e-12
 
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30

Time 1505.8 secs.

Motif 15

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Summary

Sequence Logo

E-value 2.5e-115
Width 10
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

SG[HY]CI[IV][FLW]VC[AL]

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
698 19 1.01e-12 CEVFRPYTCC SGHCIIFVCA
1020 26 2.67e-12 CEFHKRSTCC SGHCIIWWCA
410 18 2.67e-12 CEFHKRSTCC SGHCIIWWCA
1192 21 5.23e-12 ICDIFFPNCC SGWCIILVCA
417 17 5.23e-12 MCDLFNSKCC SGWCIILVCA
330 17 5.23e-12 ICDIFFPNCC SGWCIILVCA
1026 26 7.05e-12 CEFHRGYTCC SEHCIIWVCA
1024 26 7.05e-12 CEFHRGYTCC SEHCIIWVCA
1019 26 7.05e-12 CEFHRPYTCC SGYCIVFVCA
334 18 7.05e-12 CEFHRPYTCC SGYCIVFVCA
333 18 7.05e-12 CEFHRGYTCC SEHCIIWVCA
1025 26 1.17e-11 CEFHRGYMCC SEHCIIFVCA
329 18 1.17e-11 CEFHRGYMCC SEHCIIFVCA
1193 21 1.94e-11 ICGILFPSCC SGWCIVLVCA
1021 26 1.94e-11 CEFHKPSTCC SGHCIFWWCA
419 17 1.94e-11 ICGILFPSCC SGWCIVLVCA
413 18 1.94e-11 CEFHKPSTCC SGHCIFWWCA
412 18 1.94e-11 CEFHKPSSCC SGHCIFWWCA
1027 26 3.05e-11 CEFHRGYTCC SGHCLIWVCA
411 18 3.05e-11 CEFHRGYTCC SGHCLIWVCA
416 17 4.61e-11 MCDLFNSKCC SGWCIILFCA
1707 18 4.52e-10 MCNVLDQNCC DGYCIVFVCT
1704 18 4.52e-10 MCNLLDQNCC DGYCIVFVCT
1705 18 7.44e-10 MCNLLDQNCC DGYCIVLVCT
573 19 1.18e-09 CDVFRPYRCC SGYCILLLCA
1706 18 1.67e-09 MCNLLDQNCC EGYCIVLVCT
418 16 3.62e-09 EVCDIFFPTC CGYCILLFCA
415 16 3.62e-09 EICDFFFPTC CGYCILLFCA
1194 20 1.27e-08 EVCNFFFPTC CGYCVLLVCL
420 16 1.27e-08 ELCNFFFPTC CGYCVLLVCL
1750 19 1.37e-08 FCGVNGGLCC SNLCLFFVCL FS
1749 19 1.37e-08 FCGINGGLCC SNLCLFFVCL TFS
1748 19 1.37e-08 FCGINGGLCC SNLCLFFVCL TFS
1744 19 1.85e-08 CTIFQPGKCC SGWCLIYRCT
183 17 2.86e-08 LCDALDSDCC SGVCMVFFCL
520 17 4.74e-08 LCDVIDPDCC NNFCIIFFCI
181 17 9.42e-08 LCTFFFPNCC NGYCVQFICL
543 16 1.01e-07 EACLVLYTDC CGYCVLAVCL
84 19 2.36e-07 CAITEMAECC SGFCLIYRCS

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
84 2.36e-07
181 9.42e-08
183 2.86e-08
329 1.17e-11
330 5.23e-12
333 7.05e-12
334 7.05e-12
410 2.67e-12
411 3.05e-11
412 1.94e-11
413 1.94e-11
415 3.62e-09
416 4.61e-11
417 5.23e-12
418 3.62e-09
419 1.94e-11
420 1.27e-08
520 4.74e-08
543 1.01e-07
573 1.18e-09
698 1.01e-12
1019 7.05e-12
1020 2.67e-12
1021 1.94e-11
1024 7.05e-12
1025 1.17e-11
1026 7.05e-12
1027 3.05e-11
1192 5.23e-12
1193 1.94e-11
1194 1.27e-08
1704 4.52e-10
1705 7.44e-10
1706 1.67e-09
1707 4.52e-10
1744 1.85e-08
1748 1.37e-08
1749 1.37e-08
1750 1.37e-08
 
0
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35

Time 1563.2 secs.

Motif 16

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Summary

Sequence Logo

E-value 3.5e-093
Width 10
Sites 32
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CCSGSC[ST][GN][TN][VI]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
435 14 8.07e-11 SREQSVRDTS CCSMSCTNNI CF
434 14 8.07e-11 SREQCVRDTS CCSMSCTNNI CF
433 14 8.07e-11 SREQCVRDTS CCSMSCTNNI CC
432 14 8.07e-11 SRELCVRDTS CCSMSCTNNI CF
430 14 8.07e-11 SGEQCVRDTS CCSMSCTNNI CF
429 14 8.07e-11 SGELCVRDTS CCSMSCTNNI CF
443 14 8.97e-11 TGETCWLASS CCSFSCTNNV CF
431 14 8.97e-11 SGETCWLDSS CCSFSCTNNV CF
414 14 8.97e-11 SGETCWRDTS CCSFSCTNNV CF
1729 16 1.70e-10 GAKCSKLMYD CCSGSCSGTV GRC
470 15 1.70e-10 GAKCSKLMYD CCSGSCSGTV GRC
446 14 1.70e-10 TGEYCWLASS CCSYSCTNNV CF
408 15 1.70e-10 GAKCSRLMYD CCSGSCSGTV GRC
407 15 1.70e-10 GAKCSRLLYD CCSGSCSGTV GRC
399 15 1.70e-10 GARCSKLMYD CCSGSCSGTV GRC
398 15 1.70e-10 GAQCSKLMYD CCSGSCSGTV GRC
397 15 1.70e-10 GAKCSRLMYD CCSGSCSGTV GRC
396 15 1.70e-10 GAKCSRLLYD CCSGSCSGTV GRC
394 15 1.70e-10 GAKCSKLMYD CCSGSCSGTV GRCY
393 15 1.70e-10 GAKCSKLMYD CCSGSCSGTV GRC
391 15 1.70e-10 GAKCSKLLYD CCSGSCSGTV GRC
390 15 1.70e-10 GAKCSKLAYD CCSGSCSGTV GRC
389 15 1.70e-10 GAKCDRLMYD CCSGSCSGTV GRC
388 15 1.70e-10 GAKCDKLMYD CCSGSCSGTV GRC
442 14 3.32e-10 TGETCWLASS CCSFSCTNNI CF
423 14 4.59e-10 SGEYCWLDTS CCSKSCTNNV CF
445 14 1.11e-09 TGEYCWLASS CCSYSCTDNV CF
395 15 1.35e-09 GAKCSKLMYD CCTGSCSGTV GRC
392 15 1.77e-09 GAKCSKLMYD CCSGSCSGAV GRC
444 14 3.27e-09 TGEYCWLASS CCGYSCTNNV CF
521 14 3.66e-08 TNGACYHRDT CCSKSCNLTI NRCLAS
453 14 2.54e-07 RGGGCSQHPH CCSGTCNKTF GVCL

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
388 1.70e-10
389 1.70e-10
390 1.70e-10
391 1.70e-10
392 1.77e-09
393 1.70e-10
394 1.70e-10
395 1.35e-09
396 1.70e-10
397 1.70e-10
398 1.70e-10
399 1.70e-10
407 1.70e-10
408 1.70e-10
414 8.97e-11
423 4.59e-10
429 8.07e-11
430 8.07e-11
431 8.97e-11
432 8.07e-11
433 8.07e-11
434 8.07e-11
435 8.07e-11
442 3.32e-10
443 8.97e-11
444 3.27e-09
445 1.11e-09
446 1.70e-10
453 2.54e-07
470 1.70e-10
521 3.66e-08
1729 1.70e-10
 
0
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25

Time 1620 secs.

Motif 17

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Summary

Sequence Logo

E-value 2.7e-095
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CS[DN]P[PRV]C[HNS][LV][EK]H

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1751 4 1.13e-12 YGC CSNPVCHLEH SNLC
875 3 1.13e-12 GC CSNPVCHVEH SYMC
874 3 1.13e-12 GC CSNPVCHLEH SNMC
873 3 1.13e-12 GC CSNPVCHLEH SNLCTNG
872 3 1.13e-12 GC CSNPVCHLEH SNLCGGAAGG
871 3 1.13e-12 GC CSNPVCHLEH SNLCGAGGAA
870 3 1.13e-12 GC CSNPVCHLEH SNLC
277 2 1.13e-12 C CSNPVCHLEH SNLCTNGG
625 4 1.00e-10 DEC CSDPRCAVKH QDLC
8 19 1.00e-10 LMELTVRDEC CSDPRCAVKH QDLCG
1263 15 8.10e-10 NDKASGVNGC CSNPACHVDH AELC
1625 7 1.09e-09 TVRDAC CSDPRCSGKH QDLC
745 4 1.09e-09 EGC CSDPRCSGKH QDLCS
12 19 1.09e-09 LMKRTVRDAC CSDPRCSGKH QDLCG
9 19 1.09e-09 LMELTVREGC CSDPRCSGKH QDLCS
52 17 1.22e-09 SDLMALRGGC CSRPPCILEH PEICGRRR
1259 8 1.74e-09 MTVREEC CSDPRCSVGH QDMCR
1225 8 1.74e-09 LTVREEC CSDPRCSVGH QDMCR
989 4 1.74e-09 GGC CSRPPCILKH PEIC
53 17 1.74e-09 SDLMALRGGC CSRPPCILKH PEICGRRR
1626 7 1.94e-09 TVREAC CSDPRCSGQH QEKC
13 19 1.94e-09 LMKRTVREAC CSDPRCSGQH QEKCG
1655 6 3.44e-09 VIDSC CSNPPCAHVH CH
7 18 3.44e-09 DWIARVIDSC CSNPPCAHVH CHRRR
1368 4 3.85e-09 QEC CSYPACNLDH PELC
838 3 3.85e-09 GC CSDPRCNYDH PEICGGAAGG
34 14 4.74e-09 AKLFAVMQSC CSTPPCALRH MDMCG
33 14 4.74e-09 AKLFAVMQSC CSTPPCALRH MDMC
79 3 7.01e-09 AC CSYPPCNVNY PEICGGR
869 3 7.69e-09 GC CSNPVCFATH SNLC
1329 4 8.46e-09 PEC CSDPRCNSTH PELCG
896 3 2.18e-08 GC CSYPPCNVSY PEICG
304 2 2.18e-08 C CSYPPCNVSY PEICG
867 3 3.79e-08 GC CSNPPCIAKN PHMCGGRR
1499 3 4.18e-08 SC CSDSDCNANH PDMCS
273 2 4.18e-08 C CSDSDCNANH PDMCS
1389 8 5.49e-08 QIDRDPC CSYPDCGANH PEICGGKR
987 4 6.56e-08 GGC CSHPVCYVNY PQICR
1411 4 7.16e-08 QSC CSTPPCALLY MEMC
1110 6 2.80e-07 IRDEC CSNPACRVNA PHVC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
7 3.44e-09
8 1.00e-10
9 1.09e-09
12 1.09e-09
13 1.94e-09
33 4.74e-09
34 4.74e-09
52 1.22e-09
53 1.74e-09
79 7.01e-09
273 4.18e-08
277 1.13e-12
304 2.18e-08
625 1.00e-10
745 1.09e-09
838 3.85e-09
867 3.79e-08
869 7.69e-09
870 1.13e-12
871 1.13e-12
872 1.13e-12
873 1.13e-12
874 1.13e-12
875 1.13e-12
896 2.18e-08
987 6.56e-08
989 1.74e-09
1110 2.80e-07
1225 1.74e-09
1259 1.74e-09
1263 8.10e-10
1329 8.46e-09
1368 3.85e-09
1389 5.49e-08
1411 7.16e-08
1499 4.18e-08
1625 1.09e-09
1626 1.94e-09
1655 3.44e-09
1751 1.13e-12
 
0
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30

Time 1707.4 secs.

Motif 18

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Summary

Sequence Logo

E-value 3.6e-091
Width 10
Sites 26
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

GASC[RS][RK]T[MS]Y[DN]

Further Analysis

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 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
375 5 2.71e-13 CKGK GASCRKTMYD CCRGSCRSGR
1552 8 5.44e-13 STRCQGR GASCRKTMYN CCSGSCNRGR
457 5 5.44e-13 CQGR GASCRKTMYN CCSGSCRSGR
456 5 5.44e-13 CQGR GASCRKTMYN CCSGSCNRGR
377 5 1.11e-12 CKGK GASCSRTMYN CCTGSCNRGK
459 5 2.60e-12 CQGR GASCRRTSYD CCTGSCRSGR
405 5 2.60e-12 CKST GASCRRTSYD CCTGSCDRGR
458 5 3.90e-12 CQGR GASCRKTSYD CCTGSCRSGR
1607 7 1.09e-11 TRCKGK GAPCRKTMYD CCSGSCGRRG
372 5 1.09e-11 CKGK GAPCRKTMYD CCSGSCGRRG
404 5 1.59e-11 CKST GASCRRTPYD CCTGSCRSGR
381 5 2.10e-11 CKLK GQSCRKTSYD CCSGSCGRSG
357 5 2.32e-11 CKGK GAKCRKTSYD CCTGSCRSGK
382 5 2.50e-11 CKLK GQSCSRLMYD CCSGSCGRSG
378 5 2.78e-11 CKGK GQSCSKLMYD CCTGSCSRRG
374 5 3.31e-11 CKGK GASCHRTSYD CCTGSCNRGK
379 5 5.38e-11 CKGP GAKCLKTMYD CCKYSCSRGR
441 5 8.60e-11 CLSP GSSCSRLMYN CCRSCNPYSR
376 5 1.52e-10 CKGK GASCRRTSYG CCTGSCRSGR
1314 7 4.64e-10 NSCKGA GAKCSRLPYD CCTGSCRSGA
1270 6 4.64e-10 NCKGA GAKCSRLPYD CCTGSCRSGA
440 5 5.57e-10 CLSP GSSCSPTSYN CCRSCNPYSR
439 5 5.57e-10 CLSP GSSCSPTSYN CCRSCNPYSR
401 5 5.57e-10 CKSP GSSCSPTSYN CCRSCNPYTK
380 5 1.14e-09 CKGP GASCIRIAYN CCKYSCRNGK
343 5 3.78e-09 CKAA GKSCSRIAYN CCTGSCRSGK

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
343 3.78e-09
357 2.32e-11
372 1.09e-11
374 3.31e-11
375 2.71e-13
376 1.52e-10
377 1.11e-12
378 2.78e-11
379 5.38e-11
380 1.14e-09
381 2.10e-11
382 2.50e-11
401 5.57e-10
404 1.59e-11
405 2.60e-12
439 5.57e-10
440 5.57e-10
441 8.60e-11
456 5.44e-13
457 5.44e-13
458 3.90e-12
459 2.60e-12
1270 4.64e-10
1314 4.64e-10
1552 5.44e-13
1607 1.09e-11
 
0
5
10
15
20
25

Time 1755.3 secs.

Motif 19

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Summary

Sequence Logo

E-value 2.9e-085
Width 10
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

ELC[DN][IV][FLI]F[QP][ND]C

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
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     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1192 10 1.21e-11 LNKRCIDGG EICDIFFPNC CSGWCIILVC
330 6 1.21e-11 CIDGG EICDIFFPNC CSGWCIILVC
1707 7 3.38e-11 WCKQSG EMCNVLDQNC CDGYCIVFVC
427 6 6.26e-11 CLGFG EVCNFFFPNC CSYCVALVCL
1706 7 7.44e-11 WCKQSG EMCNLLDQNC CEGYCIVLVC
1705 7 7.44e-11 WCKQSG EMCNLLDQNC CDGYCIVLVC
1704 7 7.44e-11 WCKQSG EMCNLLDQNC CDGYCIVFVC
418 6 1.07e-10 CLDAG EVCDIFFPTC CGYCILLFCA
344 6 2.15e-10 CKAEN ELCNIFIQNC CDGTCLLICI
1417 10 2.53e-10 QVKPCRKEH QLCDLIFQNC CRGWYCVVLS
1416 10 2.53e-10 QVKPCRKEH QLCDLIFQNC CRGWYCLLRP
1195 10 2.53e-10 LNKRCQEFG EVCNFFFPDC CGYCVLLLCI
420 6 2.53e-10 CLEFG ELCNFFFPTC CGYCVLLVCL
415 6 2.53e-10 CLDAG EICDFFFPTC CGYCILLFCA
1194 10 3.47e-10 LNKRCLEFG EVCNFFFPTC CGYCVLLVCL
409 6 4.78e-10 CLAEH ETCNIFTQNC CEGVCIFICV
428 6 5.56e-10 CLGGG EVCDIFFPQC CGYCILLFCT
345 6 5.56e-10 CKAES EACNIITQNC CDGKCLFFCI
387 6 6.40e-10 CKQAG ESCDIFSQNC CVGTCAFICI
438 6 1.70e-09 CLSGG EVCDFLFPKC CNYCILLFCS
1662 9 2.21e-09 VKPCRKEG QLCDPIFQNC CRGWNCVLFC
1527 10 2.21e-09 SIRMCRREA QLCDPIFQNC CHGLFCVLVC
520 6 2.21e-09 CTQSG ELCDVIDPDC CNNFCIIFFC
455 6 2.51e-09 CPNTG ELCDVVEQNC CYTYCFIVVC
454 6 2.51e-09 CPNTG ELCDVVEQNC CYTYCFIVVC
465 6 2.85e-09 CRLGA ESCDVISQNC CQGTCVFFCL
328 6 4.63e-09 CIAES EPCNIITQNC CDGKCLFFCI
417 6 1.73e-08 CLDAG EMCDLFNSKC CSGWCIILVC
416 6 1.73e-08 CLDAG EMCDLFNSKC CSGWCIILFC
1193 10 1.92e-08 LNKRCLDGG EICGILFPSC CSGWCIVLVC
419 6 1.92e-08 CLDGG EICGILFPSC CSGWCIVLVC
424 6 2.86e-08 CLGFG EACLILYSDC CGYCVGAICL
183 6 3.82e-08 CAQSS ELCDALDSDC CSGVCMVFFC
426 6 5.06e-08 CLGFG EACLMLYSDC CSYCVGAVCL
425 6 5.06e-08 CLGFG EACLMLYSDC CSYCVALVCL
386 6 9.57e-08 CKQAD ESCNVFSLDC CTGLCLGFCV
543 6 1.24e-07 CYGFG EACLVLYTDC CGYCVLAVCL
1703 9 1.61e-07 WATIDECE ETCNVTFKTC CGPPGDWQCV
927 18 1.76e-07 ACGGHAHCCS QSCNILASTC NA
1360 7 1.98e-06 QCRVEG EICGMLFEAQ CCDGWCFFVC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
183 3.82e-08
328 4.63e-09
330 1.21e-11
344 2.15e-10
345 5.56e-10
386 9.57e-08
387 6.40e-10
409 4.78e-10
415 2.53e-10
416 1.73e-08
417 1.73e-08
418 1.07e-10
419 1.92e-08