MEME

For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.nbcr.net.

If you use MEME in your research, please cite the following paper:
Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.

Discovered Motifs   |   Block diagrams of Motifs   |   Program information   |   Explanation

Discovered Motifs

Motif Overview

Motif 1
  • 6.0e-097
  • 40 sites
 Motif 1 Logo
Motif 2
  • 8.8e-074
  • 40 sites
 Motif 2 Logo
Motif 3
  • 2.1e-066
  • 39 sites
 Motif 3 Logo
Motif 4
  • 2.3e-054
  • 40 sites
 Motif 4 Logo
Motif 5
  • 1.6e-052
  • 40 sites
 Motif 5 Logo
Motif 6
  • 3.2e-052
  • 40 sites
 Motif 6 Logo
Motif 7
  • 1.5e-048
  • 28 sites
 Motif 7 Logo
Motif 8
  • 8.5e-047
  • 39 sites
 Motif 8 Logo
Motif 9
  • 9.8e-042
  • 40 sites
 Motif 9 Logo
Motif 10
  • 2.3e-046
  • 39 sites
 Motif 10 Logo
Motif 11
  • 5.0e-042
  • 36 sites
 Motif 11 Logo
Motif 12
  • 5.3e-039
  • 39 sites
 Motif 12 Logo
Motif 13
  • 1.2e-032
  • 20 sites
 Motif 13 Logo
Motif 14
  • 7.4e-030
  • 37 sites
 Motif 14 Logo
Motif 15
  • 1.7e-026
  • 21 sites
 Motif 15 Logo
Motif 16
  • 3.9e-023
  • 11 sites
 Motif 16 Logo
Motif 17
  • 3.3e-028
  • 24 sites
 Motif 17 Logo
Motif 18
  • 1.3e-022
  • 36 sites
 Motif 18 Logo
Motif 19
  • 1.2e-025
  • 40 sites
 Motif 19 Logo
Motif 20
  • 2.2e-022
  • 37 sites
 Motif 20 Logo

Further Analysis

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Motif 1

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Summary

Sequence Logo

E-value 6.0e-097
Width 5
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

[RK]LMYD

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1022 14 4.77e-08 VCKGKGAKCS RLMYD CCTGSCRSGK
484 3 4.77e-08 CS RLMYD CCTGSC
408 10 4.77e-08 CKYKGAKCS RLMYD CCSGSCSGTV
397 10 4.77e-08 CKSKGAKCS RLMYD CCSGSCSGTV
389 10 4.77e-08 CKSKGAKCD RLMYD CCSGSCSGTV
382 10 4.77e-08 CKLKGQSCS RLMYD CCSGSCGRSG
373 10 4.77e-08 CKGKGAPCT RLMYD CCHGSCSSSK
371 10 4.77e-08 CKGKGAKCS RLMYD CCTGSCRSGK
370 10 4.77e-08 CKGKGAKCS RLMYD CCTGSCRSGK
369 10 4.77e-08 CKGKGAKCS RLMYD CCTGSCRSGK
368 10 4.77e-08 CKGKGAKCS RLMYD CCTGSCRSGK
367 10 4.77e-08 CKGKGAKCS RLMYD CCTGSCRSGA
366 10 4.77e-08 CKGKGAKCS RLMYD CCTGSCASGK
365 10 4.77e-08 CKGKGAKCS RLMYD CC
355 10 4.77e-08 CKGKGAKAS RLMYD AC
351 10 4.77e-08 CKGKGAACS RLMYD CCTGSCRSGK
349 10 4.77e-08 CKGAGAKCS RLMYD CCTGSCRSGK
348 10 4.77e-08 CKGAGAKCS RLMYD CCTGSCRSGK
346 10 4.77e-08 CKGAGAACS RLMYD CCTGSCRSGK
180 10 4.77e-08 CAGKGAKCS RLMYD CCTGSCRSGK
179 10 4.77e-08 CAGAGAKCS RLMYD CCTGSCRSGK
1729 11 9.75e-08 YCKSKGAKCS KLMYD CCSGSCSGTV
470 10 9.75e-08 CRSKGAKCS KLMYD CCSGSCSGTV
399 10 9.75e-08 CKSKGARCS KLMYD CCSGSCSGTV
398 10 9.75e-08 CKSKGAQCS KLMYD CCSGSCSGTV
395 10 9.75e-08 CKSKGAKCS KLMYD CCTGSCSGTV
394 10 9.75e-08 CKSKGAKCS KLMYD CCSGSCSGTV
393 10 9.75e-08 CKSKGAKCS KLMYD CCSGSCSGTV
392 10 9.75e-08 CKSKGAKCS KLMYD CCSGSCSGAV
388 10 9.75e-08 CKSKGAKCD KLMYD CCSGSCSGTV
378 10 9.75e-08 CKGKGQSCS KLMYD CCTGSCSRRG
1607 12 1.83e-07 RCKGKGAPCR KTMYD CCSGSCGRRG
379 10 1.83e-07 CKGPGAKCL KTMYD CCKYSCSRGR
375 10 1.83e-07 CKGKGASCR KTMYD CCRGSCRSGR
372 10 1.83e-07 CKGKGAPCR KTMYD CCSGSCGRRG
359 10 2.30e-07 CKGKGAKCS LLMYD CCTGSCRSGK
358 10 2.85e-07 CKGKGAKCS ALMYD CCTGSCRSGK
363 10 3.31e-07 CKGKGAKCS RLMFD CCTGSCRSGK
441 10 3.79e-07 CLSPGSSCS RLMYN CCRSCNPYSR
361 10 4.76e-07 CKGKGAKCS RAMYD CCTGSCRSGK

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
179 4.77e-08
180 4.77e-08
346 4.77e-08
348 4.77e-08
349 4.77e-08
351 4.77e-08
355 4.77e-08
358 2.85e-07
359 2.30e-07
361 4.76e-07
363 3.31e-07
365 4.77e-08
366 4.77e-08
367 4.77e-08
368 4.77e-08
369 4.77e-08
370 4.77e-08
371 4.77e-08
372 1.83e-07
373 4.77e-08
375 1.83e-07
378 9.75e-08
379 1.83e-07
382 4.77e-08
388 9.75e-08
389 4.77e-08
392 9.75e-08
393 9.75e-08
394 9.75e-08
395 9.75e-08
397 4.77e-08
398 9.75e-08
399 9.75e-08
408 4.77e-08
441 3.79e-07
470 9.75e-08
484 4.77e-08
1022 4.77e-08
1607 1.83e-07
1729 9.75e-08
 
0
5
10
15
20
25
30

Time 48.1 secs.

Motif 2

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Summary

Sequence Logo

E-value 8.8e-074
Width 5
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

NNPH[VI]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1146 12 1.21e-07 GCCSNPACAG NNPHV CRQ
1115 14 1.21e-07 ECCSNPACRV NNPHV CRRR
1114 14 1.21e-07 ECCSNPACRV NNPHV C
1108 14 1.21e-07 ECCSNPACRA NNPHV C
1107 14 1.21e-07 ECCSNPACAV NNPHV C
1106 14 1.21e-07 ECCSNAACRV NNPHV C
1105 14 1.21e-07 ECCSAPACRV NNPHV C
1104 14 1.21e-07 ECCANPACRV NNPHV C
1103 14 1.21e-07 ACCSNPACRV NNPHV C
1101 14 1.21e-07 ECCSNPACRV NNPHV C
1078 14 1.21e-07 ECCSNPACRV NNPHV C
689 11 1.21e-07 ECCSNPACRV NNPHV C
632 12 1.21e-07 ECCSRPPCRV NNPHV CRRR
629 12 1.21e-07 ECCSNPACRV NNPHV CRRR
628 12 1.21e-07 ECCSNPACRL NNPHV CRRR
276 10 1.21e-07 CCSNPACRV NNPHV C
155 14 1.21e-07 ECCSNPACRV NNPHV C
107 12 1.21e-07 ECCSNPACRV NNPHV C
97 13 1.21e-07 ECCSNPACRV NNPHV C
78 11 1.21e-07 ACCSNPACRV NNPHV C
1232 15 2.28e-07 GCCSHPACAG NNPHI CGRRR
1166 15 2.28e-07 GCCSHPACAG NNPHI CGRRR
851 11 2.28e-07 GCCSHPACNV NNPHI CG
850 11 2.28e-07 GCCSHPACNV NNPHI C
848 11 2.28e-07 GCCSHPACAG NNPHI CS
847 11 2.28e-07 GCCSHPACAG NNPHI C
130 26 2.28e-07 GCCSHPACAG NNPHI CS
129 26 2.28e-07 GCCSHPACAG NNPHI CG
71 26 2.28e-07 GCCSHPACAG NNPHI CGRRR
866 11 4.88e-07 GCCSNPACMV NNPQI C
653 12 4.88e-07 PCCSNPACNV NNPQI C
1113 14 6.73e-07 ECCSNPACRV NNPHA C
626 12 6.73e-07 ECCSNPACRL NNPHA CRRR
1229 16 8.25e-07 ECCASPPCRL NNPYV CH
1165 16 8.25e-07 ECCASPPCRL NNPYV CH
1463 12 8.69e-07 GCCSHPVCNL NNPQM CR
986 12 8.69e-07 GCCSHPVCYF NNPQM CR
985 12 8.69e-07 GCCSHPVCNL NNPQM CR
1111 14 9.74e-07 ECCSNPACRV NNAHV C
864 11 1.37e-06 GCCSNLACAG NNLHI C

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
71 2.28e-07
78 1.21e-07
97 1.21e-07
107 1.21e-07
129 2.28e-07
130 2.28e-07
155 1.21e-07
276 1.21e-07
626 6.73e-07
628 1.21e-07
629 1.21e-07
632 1.21e-07
653 4.88e-07
689 1.21e-07
847 2.28e-07
848 2.28e-07
850 2.28e-07
851 2.28e-07
864 1.37e-06
866 4.88e-07
985 8.69e-07
986 8.69e-07
1078 1.21e-07
1101 1.21e-07
1103 1.21e-07
1104 1.21e-07
1105 1.21e-07
1106 1.21e-07
1107 1.21e-07
1108 1.21e-07
1111 9.74e-07
1113 6.73e-07
1114 1.21e-07
1115 1.21e-07
1146 1.21e-07
1165 8.25e-07
1166 2.28e-07
1229 8.25e-07
1232 2.28e-07
1463 8.69e-07
 
0
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25
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35

Time 157 secs.

Motif 3

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Summary

Sequence Logo

E-value 2.1e-066
Width 5
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

FAT[NH][SP]

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
869 9 1.21e-07 GCCSNPVC FATHS NLC
742 10 1.21e-07 EECCPNPPC FATHS EICG
31 20 1.21e-07 REECCPNPPC FATHS EICGGRR
30 20 1.21e-07 PEECCSNPPC FATHS EICGGRR
29 20 1.21e-07 PEECCSNPPC FATHS EICG
28 20 1.21e-07 PEECCPNPPC FATHS EICGVRR
27 20 1.21e-07 PEECCPNPPC FATHS EICGV
18 20 1.21e-07 PEECCPNPPC FATHS NICGGRR
17 20 1.21e-07 PEECCPNPPC FATHS NICG
16 20 1.21e-07 PEECCPNPPC FATHS EICGGRR
15 20 1.21e-07 PEECCPNPPC FATHS EICG
1752 10 3.44e-07 YGCCSYPPC FATNS DYC
895 9 3.44e-07 GCCSYPPC FATNS GYC
894 9 3.44e-07 GCCSYPPC FATNS DYC
893 9 3.44e-07 GCCSYPPC FATNS DC
743 10 3.44e-07 EECCPNPPC FATNS DICG
32 20 3.44e-07 REECCPNPPC FATNS DICGGRR
20 20 3.44e-07 PEECCPNPPC FATNS DICGGRR
19 20 3.44e-07 PEECCPNPPC FATNS DICG
1254 13 6.70e-07 IKGCCSYPPC FATNP DCGRRR
1223 13 6.70e-07 IKGCCSYPPC FATNP DCGRRR
892 9 6.70e-07 GCCSYPPC FATNP DCGGAGGAG
891 9 6.70e-07 GCCSYPPC FATNP DCGGAAGG
890 9 6.70e-07 GCCSYPPC FATNP DCGGAAG
889 9 6.70e-07 GCCSYPPC FATNP DCGGAAAGG
888 9 6.70e-07 GCCSYPPC FATNP DCGGAA
887 9 6.70e-07 GCCSYPPC FATNP DCGAGAAG
886 9 6.70e-07 GCCSYPPC FATNP DCAGGG
885 9 6.70e-07 GCCSYPPC FATNP DCAGG
884 9 6.70e-07 GCCSYPPC FATNP DCAGAGA
883 9 6.70e-07 GCCSYPPC FATNP DCAG
882 9 6.70e-07 GCCSYPPC FATNP DCA
881 9 6.70e-07 GCCSYPPC FATNP DC
26 20 7.35e-07 PAECCTNPPC FAQHS DLCGARR
25 20 7.35e-07 PAECCTNPPC FAQHS DLCGA
24 20 7.35e-07 PAECCPNPPC FAQHS NLCGARR
23 20 7.35e-07 PAECCPNPPC FAQHS NLCGA
22 20 7.35e-07 PAECCPNPPC FAQHS DLCGARR
21 20 7.35e-07 PAECCPNPPC FAQHS DLCGA

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
15 1.21e-07
16 1.21e-07
17 1.21e-07
18 1.21e-07
19 3.44e-07
20 3.44e-07
21 7.35e-07
22 7.35e-07
23 7.35e-07
24 7.35e-07
25 7.35e-07
26 7.35e-07
27 1.21e-07
28 1.21e-07
29 1.21e-07
30 1.21e-07
31 1.21e-07
32 3.44e-07
742 1.21e-07
743 3.44e-07
869 1.21e-07
881 6.70e-07
882 6.70e-07
883 6.70e-07
884 6.70e-07
885 6.70e-07
886 6.70e-07
887 6.70e-07
888 6.70e-07
889 6.70e-07
890 6.70e-07
891 6.70e-07
892 6.70e-07
893 3.44e-07
894 3.44e-07
895 3.44e-07
1223 6.70e-07
1254 6.70e-07
1752 3.44e-07
 
0
5
10
15
20
25
30

Time 302.7 secs.

Motif 4

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Summary

Sequence Logo

E-value 2.3e-054
Width 5
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AAN[DN]K

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1263 3 3.32e-07 NA AANDK ASGVNGCCSN
1262 3 3.32e-07 NA AANDK ASDVIPLALQ
61 1 3.32e-07 AANDK TSAWIAWAGS
60 1 3.32e-07 AANDK TSAWIAWAGS
59 1 3.32e-07 AANDK ASVQIALTVQ
58 1 3.32e-07 AANDK ASVQIALTVQ
57 1 3.32e-07 AANDK ASVQIALTVQ
56 1 3.32e-07 AANDK ASVQIALTVQ
55 1 3.32e-07 AANDK ASNLMALRDE
54 1 3.32e-07 AANDK ASDLMALTVR
53 1 3.32e-07 AANDK ASDLMALRGG
52 1 3.32e-07 AANDK ASDLMALRGG
51 1 3.32e-07 AANDK ASDLMALRDG
50 1 3.32e-07 AANDK ASDLMALRDG
49 1 3.32e-07 AANDK ASAWTTRTIK
48 1 3.32e-07 AANDK ASAWIARTVR
47 1 3.32e-07 AANDK APVQIVLTVQ
46 1 3.32e-07 AANDK APVQIVLTVQ
69 1 6.67e-07 AANNK ATDLMARTVR
68 1 6.67e-07 AANNK ATDLMALTVR
67 1 6.67e-07 AANNK ATDLMALTVR
66 1 6.67e-07 AANNK ATDLMALTVR
65 1 6.67e-07 AANNK ATDLMALTVR
64 1 6.67e-07 AANNK ATDLMALTVR
63 1 6.67e-07 AANNK ATDLMALRYH
41 1 1.08e-06 AANAK LFDVRQSCCS
40 1 1.08e-06 AANAK LFDVRQSCCS
39 1 1.08e-06 AANAK LFDVGQSCCS
38 1 1.08e-06 AANAK LFDVGQSCCS
35 1 1.08e-06 AANAK LFAVMQSCCS
33 1 1.08e-06 AANAK LFAVMQSCCS
74 1 1.58e-06 AASDK ASELMALAVR
73 1 1.58e-06 AASDK ASELMALAVR
72 1 1.58e-06 AASDK ASELMALAVR
71 1 1.58e-06 AASDK ASELMALAVR
70 1 1.58e-06 AASDK ASELMALAVR
1093 5 2.09e-06 IKNT AASNK ASSLVALVVR
1092 5 2.09e-06 IKNT AASNK APSLVAIAVR
1539 7 2.42e-06 SNGRNA AADDK PSDWIALAIK
62 1 2.80e-06 AANKK ASDLMALTVR

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
33 1.08e-06
35 1.08e-06
38 1.08e-06
39 1.08e-06
40 1.08e-06
41 1.08e-06
46 3.32e-07
47 3.32e-07
48 3.32e-07
49 3.32e-07
50 3.32e-07
51 3.32e-07
52 3.32e-07
53 3.32e-07
54 3.32e-07
55 3.32e-07
56 3.32e-07
57 3.32e-07
58 3.32e-07
59 3.32e-07
60 3.32e-07
61 3.32e-07
62 2.80e-06
63 6.67e-07
64 6.67e-07
65 6.67e-07
66 6.67e-07
67 6.67e-07
68 6.67e-07
69 6.67e-07
70 1.58e-06
71 1.58e-06
72 1.58e-06
73 1.58e-06
74 1.58e-06
1092 2.09e-06
1093 2.09e-06
1262 3.32e-07
1263 3.32e-07
1539 2.42e-06
 
0
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25
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35

Time 416.9 secs.

Motif 5

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Summary

Sequence Logo

E-value 1.6e-052
Width 5
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

KGKGA

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1607 4 1.05e-06 TRC KGKGA PCRKTMYDCC
1022 6 1.05e-06 GLPVC KGKGA KCSRLMYDCC
377 2 1.05e-06 C KGKGA SCSRTMYNCC
376 2 1.05e-06 C KGKGA SCRRTSYGCC
375 2 1.05e-06 C KGKGA SCRKTMYDCC
374 2 1.05e-06 C KGKGA SCHRTSYDCC
373 2 1.05e-06 C KGKGA PCTRLMYDCC
372 2 1.05e-06 C KGKGA PCRKTMYDCC
371 2 1.05e-06 C KGKGA KCSRLMYDCC
370 2 1.05e-06 C KGKGA KCSRLMYDCC
369 2 1.05e-06 C KGKGA KCSRLMYDCC
368 2 1.05e-06 C KGKGA KCSRLMYDCC
367 2 1.05e-06 C KGKGA KCSRLMYDCC
366 2 1.05e-06 C KGKGA KCSRLMYDCC
365 2 1.05e-06 C KGKGA KCSRLMYDCC
364 2 1.05e-06 C KGKGA KCSRLMYACC
363 2 1.05e-06 C KGKGA KCSRLMFDCC
362 2 1.05e-06 C KGKGA KCSRLAYDCC
361 2 1.05e-06 C KGKGA KCSRAMYDCC
360 2 1.05e-06 C KGKGA KCSR
359 2 1.05e-06 C KGKGA KCSLLMYDCC
358 2 1.05e-06 C KGKGA KCSALMYDCC
357 2 1.05e-06 C KGKGA KCRKTSYDCC
356 2 1.05e-06 C KGKGA KCCRSGKC
355 2 1.05e-06 C KGKGA KASRLMYDAC
354 2 1.05e-06 C KGKGA KAARSGKC
353 2 1.05e-06 C KGKGA GCDYSHECCS
352 2 1.05e-06 C KGKGA CSRLMYKCC
351 2 1.05e-06 C KGKGA ACSRLMYDCC
133 2 1.05e-06 A KGKGA KASR
399 2 1.91e-06 C KSKGA RCSKLMYDCC
397 2 1.91e-06 C KSKGA KCSRLMYDCC
396 2 1.91e-06 C KSKGA KCSRLLYDCC
395 2 1.91e-06 C KSKGA KCSKLMYDCC
393 2 1.91e-06 C KSKGA KCSKLMYDCC
389 2 1.91e-06 C KSKGA KCDRLMYDCC
388 2 1.91e-06 C KSKGA KCDKLMYDCC
1652 11 2.48e-06 VGCEECPMHC KGKNA KPTCDNGVCN
1650 11 2.48e-06 VGCEECPAHC KGKNA KPTCDDGVCN
1649 11 2.48e-06 VGCEECPAHC KGKNA IPTCDDGVCN

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
133 1.05e-06
351 1.05e-06
352 1.05e-06
353 1.05e-06
354 1.05e-06
355 1.05e-06
356 1.05e-06
357 1.05e-06
358 1.05e-06
359 1.05e-06
360 1.05e-06
361 1.05e-06
362 1.05e-06
363 1.05e-06
364 1.05e-06
365 1.05e-06
366 1.05e-06
367 1.05e-06
368 1.05e-06
369 1.05e-06
370 1.05e-06
371 1.05e-06
372 1.05e-06
373 1.05e-06
374 1.05e-06
375 1.05e-06
376 1.05e-06
377 1.05e-06
388 1.91e-06
389 1.91e-06
393 1.91e-06
395 1.91e-06
396 1.91e-06
397 1.91e-06
399 1.91e-06
1022 1.05e-06
1607 1.05e-06
1649 2.48e-06
1650 2.48e-06
1652 2.48e-06
 
0
5
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30

Time 531.1 secs.

Motif 6

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Summary

Sequence Logo

E-value 3.2e-052
Width 5
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

HPACG

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1727 4 1.50e-06 YCC HPACG KNFDC
1431 4 1.50e-06 RCC HPACG QQTSC
1288 6 1.50e-06 NGRCC HPACG KYFSC
1287 6 1.50e-06 NGRCC HPACG KHFSC
1286 6 1.50e-06 NGRCC HPACG GKYVKC
1285 6 1.50e-06 NGRCC HPACG AKYFKCG
1281 6 1.50e-06 NGHCC HPACG GKYVKC
1056 7 1.50e-06 GRGRCC HPACG PNYSC
1055 5 1.50e-06 GRCE HPACG QNTSK
1054 5 1.50e-06 GRCE HPACG NNTSK
1053 5 1.50e-06 GRCD HPACG QNTSK
1052 5 1.50e-06 GRCD HPACG NNTSK
1050 5 1.50e-06 GRCC HPACG QQTSC
1049 5 1.50e-06 GRCC HPACG QNTSC
1048 5 1.50e-06 GRCC HPACG QNTKC
1047 5 1.50e-06 GRCC HPACG QNTDC
1046 5 1.50e-06 GRCC HPACG QNFSC
1045 5 1.50e-06 GRCC HPACG PNYSC
1044 5 1.50e-06 GRCC HPACG NNTSC
1043 5 1.50e-06 GRCC HPACG KYYSC
1042 5 1.50e-06 GRCC HPACG KNYSC
1041 5 1.50e-06 GRCC HPACG ENTSC
953 5 1.50e-06 GECC HPACG QNTSC
681 4 1.50e-06 ECC HPACG QNTSC
680 4 1.50e-06 ECC HPACG KHFSC
650 6 1.50e-06 DGRCC HPACG KHFSC
223 3 1.50e-06 CC HPACG RKYNCGR
222 3 1.50e-06 CC HPACG RKYNC
221 3 1.50e-06 CC HPACG QNYSC
220 3 1.50e-06 CC HPACG QNTSC
219 3 1.50e-06 CC HPACG KHFNC
174 5 1.50e-06 AYCC HPACG PNYSCGTSCS
173 5 1.50e-06 AYCC HPACG KNFDC
1473 7 1.93e-06 RPECCT HPACH VSNPELC
1472 7 1.93e-06 RPECCT HPACH VSHPELC
1447 5 1.93e-06 RCCV HPACH DDCICCIT
1446 5 1.93e-06 RCCV HPACH DDCICCID
1141 6 1.93e-06 KECCT HPACH VSHPELCG
690 5 1.93e-06 ECCT HPACH VSHPELC
218 3 2.93e-06 CC HPACA ERYNC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
173 1.50e-06
174 1.50e-06
218 2.93e-06
219 1.50e-06
220 1.50e-06
221 1.50e-06
222 1.50e-06
223 1.50e-06
650 1.50e-06
680 1.50e-06
681 1.50e-06
690 1.93e-06
953 1.50e-06
1041 1.50e-06
1042 1.50e-06
1043 1.50e-06
1044 1.50e-06
1045 1.50e-06
1046 1.50e-06
1047 1.50e-06
1048 1.50e-06
1049 1.50e-06
1050 1.50e-06
1052 1.50e-06
1053 1.50e-06
1054 1.50e-06
1055 1.50e-06
1056 1.50e-06
1141 1.93e-06
1281 1.50e-06
1285 1.50e-06
1286 1.50e-06
1287 1.50e-06
1288 1.50e-06
1431 1.50e-06
1446 1.93e-06
1447 1.93e-06
1472 1.93e-06
1473 1.93e-06
1727 1.50e-06
 
0
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4
6
8
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12
14
16
18

Time 649.3 secs.

Motif 7

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Summary

Sequence Logo

E-value 1.5e-048
Width 5
Sites 28
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

DLMAL

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1567 8 8.53e-08 TANNKAT DLMAL TVRGCCGNPS
162 8 8.53e-08 ATNNKAT DLMAL TVRGCCDDPS
130 8 8.53e-08 AGNDKAT DLMAL TVRGCCSHPA
129 8 8.53e-08 AGNDKAT DLMAL TVRGCCSHPA
68 8 8.53e-08 AANNKAT DLMAL TVRGCCGNPS
67 8 8.53e-08 AANNKAT DLMAL TVRGCCDDPS
66 8 8.53e-08 AANNKAT DLMAL TVRGCCDDPP
65 8 8.53e-08 AANNKAT DLMAL TVRGCCAHLP
64 8 8.53e-08 AANNKAT DLMAL TVRGCCADPS
63 8 8.53e-08 AANNKAT DLMAL RYHECCKHPP
62 8 8.53e-08 AANKKAS DLMAL TVRGCCVYPP
54 8 8.53e-08 AANDKAS DLMAL TVRGCCVYPP
53 8 8.53e-08 AANDKAS DLMAL RGGCCSRPPC
52 8 8.53e-08 AANDKAS DLMAL RGGCCSRPPC
51 8 8.53e-08 AANDKAS DLMAL RDGCCSDPAC
50 8 8.53e-08 AANDKAS DLMAL RDGCCSDPAC
74 8 1.58e-07 AASDKAS ELMAL AVRGCCSNPA
73 8 1.58e-07 AASDKAS ELMAL AVRGCCSNLA
72 8 1.58e-07 AASDKAS ELMAL AVRGCCSHPA
71 8 1.58e-07 AASDKAS ELMAL AVRGCCSHPA
70 8 1.58e-07 AASDKAS ELMAL AVRGCCSHPA
128 8 3.48e-07 AGNAKMS ALMAL TIRGCCSHPV
55 8 4.34e-07 AANDKAS NLMAL RDECCPNPPC
772 3 5.75e-07 FD DLMLL LCCRQGPVCF
69 8 7.40e-07 AANNKAT DLMAR TVRGFCSDPS
9 8 2.02e-06 AAKFKAP ALMEL TVREGCCSDP
8 8 2.02e-06 AAKFKAP ALMEL TVRDECCSDP
1250 26 2.77e-06 GRTVTREKRK DMMDL

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 2.02e-06
9 2.02e-06
50 8.53e-08
51 8.53e-08
52 8.53e-08
53 8.53e-08
54 8.53e-08
55 4.34e-07
62 8.53e-08
63 8.53e-08
64 8.53e-08
65 8.53e-08
66 8.53e-08
67 8.53e-08
68 8.53e-08
69 7.40e-07
70 1.58e-07
71 1.58e-07
72 1.58e-07
73 1.58e-07
74 1.58e-07
128 3.48e-07
129 8.53e-08
130 8.53e-08
162 8.53e-08
772 5.75e-07
1250 2.77e-06
1567 8.53e-08
 
0
5
10
15
20
25
30
35

Time 766.9 secs.

Motif 8

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Summary

Sequence Logo

E-value 8.5e-047
Width 5
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

SHP[AV]C

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1339 5 1.21e-06 PQCC SHPAC NVDHPEICD
1338 5 1.21e-06 PQCC SHPAC NVDHPEIC
1232 8 1.21e-06 MAVRGCC SHPAC AGNNPHICGR
1166 8 1.21e-06 LAVRGCC SHPAC AGNNPHICGR
984 5 1.21e-06 GGCC SHPAC FASNPDYC
983 5 1.21e-06 GGCC SHPAC AVNHPELC
982 5 1.21e-06 GGCC SHPAC AANNQDYC
855 4 1.21e-06 GCC SHPAC SVNHPELC
854 4 1.21e-06 GCC SHPAC SGNNREYCRE
853 4 1.21e-06 GCC SHPAC SGNNPEFCRQ
852 4 1.21e-06 GCC SHPAC SGKYQPYCRP
851 4 1.21e-06 GCC SHPAC NVNNPHICG
850 4 1.21e-06 GCC SHPAC NVNNPHIC
849 4 1.21e-06 GCC SHPAC AGSNAHIC
848 4 1.21e-06 GCC SHPAC AGNNPHICS
847 4 1.21e-06 GCC SHPAC AGNNPHIC
846 4 1.21e-06 GCC SHPAC AGNNPDIC
688 4 1.21e-06 ECC SHPAC NVDHPEICR
659 21 1.21e-06 VIATDNCIPC SHPAC GINRGKC
130 19 1.21e-06 LMALTVRGCC SHPAC AGNNPHICS
129 19 1.21e-06 LMALTVRGCC SHPAC AGNNPHICG
72 19 1.21e-06 LMALAVRGCC SHPAC AGSNAHICGR
71 19 1.21e-06 LMALAVRGCC SHPAC AGNNPHICGR
70 19 1.21e-06 LMALAVRGCC SHPAC AGNNPDICG
1463 5 2.01e-06 RGCC SHPVC NLNNPQMCR
1260 9 2.01e-06 MVVRGGCC SHPVC YFNNPQMCRG
1249 8 2.01e-06 MNVRGCC SHPVC RFNYPKYCGG
1233 9 2.01e-06 MAVRGGCC SHPVC NLNNPQMCRG
1228 9 2.01e-06 LVVRGGCC SHPVC YFNNPQMCRG
1201 8 2.01e-06 LNVRGCC SHPVC RFNYPKYCGG
1167 9 2.01e-06 LAVRGGCC SHPVC NLNNPQMCRG
987 5 2.01e-06 GGCC SHPVC YVNYPQICR
986 5 2.01e-06 GGCC SHPVC YFNNPQMCR
985 5 2.01e-06 GGCC SHPVC NLNNPQMCR
859 4 2.01e-06 GCC SHPVC SAMSPIC
128 19 2.01e-06 LMALTIRGCC SHPVC SAMSPICG
858 4 3.40e-06 GCC SHPPC FLNNPDYC
857 4 3.40e-06 GCC SHPPC AQNNQDYC
856 4 3.40e-06 GCC SHPPC AMNNPDYC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
70 1.21e-06
71 1.21e-06
72 1.21e-06
128 2.01e-06
129 1.21e-06
130 1.21e-06
659 1.21e-06
688 1.21e-06
846 1.21e-06
847 1.21e-06
848 1.21e-06
849 1.21e-06
850 1.21e-06
851 1.21e-06
852 1.21e-06
853 1.21e-06
854 1.21e-06
855 1.21e-06
856 3.40e-06
857 3.40e-06
858 3.40e-06
859 2.01e-06
982 1.21e-06
983 1.21e-06
984 1.21e-06
985 2.01e-06
986 2.01e-06
987 2.01e-06
1166 1.21e-06
1167 2.01e-06
1201 2.01e-06
1228 2.01e-06
1232 1.21e-06
1233 2.01e-06
1249 2.01e-06
1260 2.01e-06
1338 1.21e-06
1339 1.21e-06
1463 2.01e-06
 
0
5
10
15
20
25
30
35

Time 903.5 secs.

Motif 9

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Summary

Sequence Logo

E-value 9.8e-042
Width 5
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

AAK[VA]K

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
32 1 3.09e-07 AAKVK YSNTREECCP
31 1 3.09e-07 AAKVK YSNTREECCP
30 1 3.09e-07 AAKVK YSNTPEECCS
29 1 3.09e-07 AAKVK YSNTPEECCS
28 1 3.09e-07 AAKVK YSNTPEECCP
27 1 3.09e-07 AAKVK YSNTPEECCP
26 1 3.09e-07 AAKVK YSLTPAECCT
25 1 3.09e-07 AAKVK YSLTPAECCT
24 1 3.09e-07 AAKVK YSLTPAECCP
23 1 3.09e-07 AAKVK YSLTPAECCP
22 1 3.09e-07 AAKVK YSLTPAECCP
21 1 3.09e-07 AAKVK YSLTPAECCP
20 1 3.09e-07 AAKVK YSKTPEECCP
19 1 3.09e-07 AAKVK YSKTPEECCP
18 1 3.09e-07 AAKVK YSKTPEECCP
17 1 3.09e-07 AAKVK YSKTPEECCP
16 1 3.09e-07 AAKVK YSKTPEECCP
15 1 3.09e-07 AAKVK YSKTPEECCP
14 1 5.60e-07 AAKFK APALMKRTVS
13 1 5.60e-07 AAKFK APALMKRTVR
12 1 5.60e-07 AAKFK APALMKRTVR
11 1 5.60e-07 AAKFK APALMKRTDS
10 1 5.60e-07 AAKFK APALMERNVW
9 1 5.60e-07 AAKFK APALMELTVR
8 1 5.60e-07 AAKFK APALMELTVR
1515 7 1.43e-06 SDGKSA AAKAK PSHLTAPFIR
546 2 1.70e-06 D AADVK PVARTNEGPG
545 2 1.70e-06 D AADVK PVARQNEGPG
544 2 1.70e-06 D AADVK PVARHNDGPG
45 1 2.74e-06 AANAK LSERLDPCCR
44 1 2.74e-06 AANAK LSERLDPCCR
43 1 2.74e-06 AANAK LSERLDPCCR
42 1 2.74e-06 AANAK LSERLDPCCR
37 1 2.74e-06 AANAK LFAVRQSCCS
36 1 2.74e-06 AANAK LFAVMQSCCS
34 1 2.74e-06 AANAK LFAVMQSCCS
1057 7 7.52e-06 GRLQAF LAKMK EIAAQTL
1013 7 7.52e-06 GKLQAF LAKMK EIAAQTL
1246 9 1.78e-05 MLTKFETK SARVK GLSFHPKRPW
1716 4 6.00e-05 WLG CARVK EACGPWEWPC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 5.60e-07
9 5.60e-07
10 5.60e-07
11 5.60e-07
12 5.60e-07
13 5.60e-07
14 5.60e-07
15 3.09e-07
16 3.09e-07
17 3.09e-07
18 3.09e-07
19 3.09e-07
20 3.09e-07
21 3.09e-07
22 3.09e-07
23 3.09e-07
24 3.09e-07
25 3.09e-07
26 3.09e-07
27 3.09e-07
28 3.09e-07
29 3.09e-07
30 3.09e-07
31 3.09e-07
32 3.09e-07
34 2.74e-06
36 2.74e-06
37 2.74e-06
42 2.74e-06
43 2.74e-06
44 2.74e-06
45 2.74e-06
544 1.70e-06
545 1.70e-06
546 1.70e-06
1013 7.52e-06
1057 7.52e-06
1246 1.78e-05
1515 1.43e-06
1716 6.00e-05
 
0
5
10
15
20
25
30
35

Time 990.9 secs.

Motif 10

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Summary

Sequence Logo

E-value 2.3e-046
Width 5
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

HP[ED][IL]C

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1389 17 3.93e-07 CCSYPDCGAN HPEIC GGKR
1340 13 3.93e-07 CCSNPACGAG HPEIC A
1339 13 3.93e-07 CCSHPACNVD HPEIC D
1338 13 3.93e-07 CCSHPACNVD HPEIC
989 13 3.93e-07 CCSRPPCILK HPEIC
988 13 3.93e-07 CCSRPPCILE HPEIC
838 12 3.93e-07 CCSDPRCNYD HPEIC GGAAGG
688 12 3.93e-07 CCSHPACNVD HPEIC R
654 13 3.93e-07 CCSYPACGAN HPEIC G
603 13 3.93e-07 CCPDPACRQN HPEIC PS
53 26 3.93e-07 CCSRPPCILK HPEIC GRRR
52 26 3.93e-07 CCSRPPCILE HPEIC GRRR
1472 14 9.71e-07 CCTHPACHVS HPELC
1368 13 9.71e-07 CCSYPACNLD HPELC
1329 13 9.71e-07 CCSDPRCNST HPELC G
1262 29 9.71e-07 CCSNPVCHVD HPELC L
1258 16 9.71e-07 CCSQPPCRWK HPELC S
1224 16 9.71e-07 CCSQPPCRWK HPELC S
1141 13 9.71e-07 CCTHPACHVS HPELC G
983 13 9.71e-07 CCSHPACAVN HPELC
855 12 9.71e-07 CCSHPACSVN HPELC
690 12 9.71e-07 CCTHPACHVS HPELC
604 13 9.71e-07 CCPDPACRQN HPELC ST
159 19 9.71e-07 CCSNPVCHVE HPELC
901 12 1.43e-06 CCVYPPCAVN HPDIC RG
900 12 1.43e-06 CCVYPPCAVN HPDIC
641 13 1.43e-06 CCSDPACSVN HPDIC GG
640 13 1.43e-06 CCSDPACAVN HPDIC GG
62 27 1.43e-06 CCVYPPCAVN HPDIC G
54 27 1.43e-06 CCVYPPCAVN HPDIC RGGR
51 26 1.43e-06 CCSDPACSVN HPDIC GGGR
50 26 1.43e-06 CCSDPACAVN HPDIC GGGR
1758 14 2.29e-06 CCKNPPCRNK HPDLC
832 12 2.29e-06 CCSDPPCRNK HPDLC G
631 13 2.73e-06 CCSNPSCAQT HPEVC
630 13 2.73e-06 CCSNPPCAQA HPEVC
1499 12 2.94e-06 CCSDSDCNAN HPDMC S
273 11 2.94e-06 CCSDSDCNAN HPDMC S
795 12 3.80e-06 CCARAACAGI HQELC GGRR

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
50 1.43e-06
51 1.43e-06
52 3.93e-07
53 3.93e-07
54 1.43e-06
62 1.43e-06
159 9.71e-07
273 2.94e-06
603 3.93e-07
604 9.71e-07
630 2.73e-06
631 2.73e-06
640 1.43e-06
641 1.43e-06
654 3.93e-07
688 3.93e-07
690 9.71e-07
795 3.80e-06
832 2.29e-06
838 3.93e-07
855 9.71e-07
900 1.43e-06
901 1.43e-06
983 9.71e-07
988 3.93e-07
989 3.93e-07
1141 9.71e-07
1224 9.71e-07
1258 9.71e-07
1262 9.71e-07
1329 9.71e-07
1338 3.93e-07
1339 3.93e-07
1340 3.93e-07
1368 9.71e-07
1389 3.93e-07
1472 9.71e-07
1499 2.94e-06
1758 2.29e-06
 
0
5
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15
20
25
30
35

Time 1066.5 secs.

Motif 11

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Summary

Sequence Logo

E-value 5.0e-042
Width 5
Sites 36
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

SGWC[IF]

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1746 21 1.24e-06 GMIKVGPPCC SGWCF FACA
1745 21 1.24e-06 GMIKIGPPCC SGWCF FACA
1639 20 1.24e-06 GFPKIGGPCC SGWCI FVCL
1325 4 1.24e-06 PCC SGWCF FACA
1200 26 1.24e-06 GMIKIGPPCC SGWCF FACA
1193 21 1.24e-06 ICGILFPSCC SGWCI VLVCA
1192 21 1.24e-06 ICDIFFPNCC SGWCI ILVCA
923 19 1.24e-06 CGTLYEERCC SGWCF FVCV
739 21 1.24e-06 GFPKIGEPCC SGWCF FVCA
669 22 1.24e-06 GMIKIGPPCC SGWCF FACA
619 22 1.24e-06 GFFKIGPPCC SGWCF LWCA
617 22 1.24e-06 GMIKIGPPCC SGWCF FACA
606 21 1.24e-06 GMIKIGPPCC SGWCF FACA
599 20 1.24e-06 GFPKIGGPCC SGWCF FVCA
542 16 1.24e-06 TSCNTGNQCC SGWCI FVSCL
541 16 1.24e-06 TSCNTGNQCC SGWCI FVCL
540 16 1.24e-06 TSCNTGNQCC SGWCI FLCL
539 16 1.24e-06 TSCDSGIQCC SGWCI FVCL
538 16 1.24e-06 TSCDSGIQCC SGWCI FVCF
537 16 1.24e-06 TGCDSGNQCC SGWCI FVCL
536 16 1.24e-06 TGCDSGNQCC SGWCI FACL
467 19 1.24e-06 GFPKPGPYCC SGWCF AVCLPV
466 19 1.24e-06 GFPKPGPYCC SGWCF VVCL
419 17 1.24e-06 ICGILFPSCC SGWCI VLVCA
417 17 1.24e-06 MCDLFNSKCC SGWCI ILVCA
416 17 1.24e-06 MCDLFNSKCC SGWCI ILFCA
330 17 1.24e-06 ICDIFFPNCC SGWCI ILVCA
1744 19 2.19e-06 CTIFQPGKCC SGWCL IYRCT
1637 21 2.19e-06 FGLFGGPLCC SGWCL FVCL
1367 21 2.19e-06 GFPKIGGPCC SGWCL GVCA
1198 24 2.19e-06 AWPILGPLCC SGWCL YVCM
918 21 2.19e-06 FSMIGALLCC SGWCL GICMT
585 20 2.19e-06 GFPKPEPHCC SGWCL FVCA
1479 23 3.03e-06 YLPCCSGRCC SGWCT RRCFPRF
1478 23 3.03e-06 YLPCCSGMCC SGWCT RRCAPRF
321 21 3.03e-06 YLPCCSGRCC SGWCT RRCSPRY

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
321 3.03e-06
330 1.24e-06
416 1.24e-06
417 1.24e-06
419 1.24e-06
466 1.24e-06
467 1.24e-06
536 1.24e-06
537 1.24e-06
538 1.24e-06
539 1.24e-06
540 1.24e-06
541 1.24e-06
542 1.24e-06
585 2.19e-06
599 1.24e-06
606 1.24e-06
617 1.24e-06
619 1.24e-06
669 1.24e-06
739 1.24e-06
918 2.19e-06
923 1.24e-06
1192 1.24e-06
1193 1.24e-06
1198 2.19e-06
1200 1.24e-06
1325 1.24e-06
1367 2.19e-06
1478 3.03e-06
1479 3.03e-06
1637 2.19e-06
1639 1.24e-06
1744 2.19e-06
1745 1.24e-06
1746 1.24e-06
 
0
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30

Time 1124.5 secs.

Motif 12

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Summary

Sequence Logo

E-value 5.3e-039
Width 5
Sites 39
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

CSNPA

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1460 5 2.23e-06 RDPC CSNPA CNVNNPQ
1340 4 2.23e-06 PRC CSNPA CGAGHPEICA
1263 15 2.23e-06 NDKASGVNGC CSNPA CHVDHAELC
1261 19 2.23e-06 LITPTVRKGC CSNPA CMLKNPNLC
1146 4 2.23e-06 KGC CSNPA CAGNNPHVCR
1132 3 2.23e-06 KC CSNPA CNRYNPAICD
1131 3 2.23e-06 KC CSNPA CNRYNKLC
1115 6 2.23e-06 IRDEC CSNPA CRVNNPHVCR
1114 6 2.23e-06 IRDEC CSNPA CRVNNPHVC
1113 6 2.23e-06 IRDEC CSNPA CRVNNPHAC
1112 6 2.23e-06 IRDEC CSNPA CRVNNPAVC
1111 6 2.23e-06 IRDEC CSNPA CRVNNAHVC
1110 6 2.23e-06 IRDEC CSNPA CRVNAPHVC
1109 6 2.23e-06 IRDEC CSNPA CRVANPHVC
1108 6 2.23e-06 IRDEC CSNPA CRANNPHVC
1107 6 2.23e-06 IRDEC CSNPA CAVNNPHVC
1103 6 2.23e-06 IRDAC CSNPA CRVNNPHVC
1101 6 2.23e-06 IRAEC CSNPA CRVNNPHVC
1078 6 2.23e-06 IADEC CSNPA CRVNNPHVC
866 3 2.23e-06 GC CSNPA CMVNNPQIC
865 3 2.23e-06 GC CSNPA CAGSNAHIC
689 3 2.23e-06 EC CSNPA CRVNNPHVC
653 4 2.23e-06 DPC CSNPA CNVNNPQIC
629 4 2.23e-06 DEC CSNPA CRVNNPHVCR
628 4 2.23e-06 DEC CSNPA CRLNNPHVCR
627 4 2.23e-06 DEC CSNPA CRLNNPHDCR
626 4 2.23e-06 DEC CSNPA CRLNNPHACR
276 2 2.23e-06 C CSNPA CRVNNPHVC
155 6 2.23e-06 ARDEC CSNPA CRVNNPHVC
107 4 2.23e-06 AEC CSNPA CRVNNPHVC
97 5 2.23e-06 ADEC CSNPA CRVNNPHVC
78 3 2.23e-06 AC CSNPA CRVNNPHVC
74 18 2.23e-06 ELMALAVRGC CSNPA CAGSNAHICG
1227 13 4.45e-06 SLPQIAHADC CSDPA CKQTPGC
641 4 4.45e-06 DGC CSDPA CSVNHPDICG
640 4 4.45e-06 DGC CSDPA CAVNHPDICG
51 17 4.45e-06 SDLMALRDGC CSDPA CSVNHPDICG
50 17 4.45e-06 SDLMALRDGC CSDPA CAVNHPDICG
631 4 7.16e-06 DEC CSNPS CAQTHPEVC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
50 4.45e-06
51 4.45e-06
74 2.23e-06
78 2.23e-06
97 2.23e-06
107 2.23e-06
155 2.23e-06
276 2.23e-06
626 2.23e-06
627 2.23e-06
628 2.23e-06
629 2.23e-06
631 7.16e-06
640 4.45e-06
641 4.45e-06
653 2.23e-06
689 2.23e-06
865 2.23e-06
866 2.23e-06
1078 2.23e-06
1101 2.23e-06
1103 2.23e-06
1107 2.23e-06
1108 2.23e-06
1109 2.23e-06
1110 2.23e-06
1111 2.23e-06
1112 2.23e-06
1113 2.23e-06
1114 2.23e-06
1115 2.23e-06
1131 2.23e-06
1132 2.23e-06
1146 2.23e-06
1227 4.45e-06
1261 2.23e-06
1263 2.23e-06
1340 2.23e-06
1460 2.23e-06
 
0
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35

Time 1202.9 secs.

Motif 13

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Summary

Sequence Logo

E-value 1.2e-032
Width 5
Sites 20
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

NSH[DTN]Q

Further Analysis

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Data Formats

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     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1612 8 7.84e-08 TRSGGAC NSHDQ CCINFCRKAT
1592 8 7.84e-08 THSGGAC NSHDQ CCNAFCSTAT
731 10 7.84e-08 ECTRSGGAC NSHDQ CCNAFCDTAT
730 10 7.84e-08 ECTRSGGAC NSHDQ CCANFCRKAT
723 10 7.84e-08 ECTHSGGAC NSHDQ CCNTFCDTAT
722 10 7.84e-08 ECTHSGGAC NSHDQ CCNAFCDTAT
721 10 7.84e-08 ECTHSGGAC NSHDQ CCNAFCDTAT
720 10 7.84e-08 ECTDSGGAC NSHDQ CCNEFCSTAT
674 10 7.84e-08 ECAHSGGAC NSHDQ CCNAFCDTAT
736 10 1.53e-07 ECTRSGGAC NSHTQ CCNAFCDTAT
735 10 1.53e-07 ECTRSGGAC NSHTQ CCDHFCSTAT
734 10 1.53e-07 ECTRSGGAC NSHTQ CCDDFCSTAT
733 10 1.53e-07 ECTRSGGAC NSHTQ CCDDFCSTAT
732 10 1.53e-07 ECTRSGGAC NSHTQ CCDDFCDTAT
725 10 1.53e-07 ECTHSGGAC NSHTQ CCDDFCSTAT
1614 8 2.32e-07 TRSGGAC NSHNQ CCDDFCSTAT
1613 8 2.32e-07 TRSGGAC NSHNQ CCDDFCSTAT
724 10 2.32e-07 ECTHSGGAC NSHNQ CCNAFCDTAT
738 10 3.90e-07 ECTRSGGAC YSHNQ CCDDFCSTAT
737 10 3.90e-07 ECTRSGGAC YSHNQ CCDDFCSTAT

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
674 7.84e-08
720 7.84e-08
721 7.84e-08
722 7.84e-08
723 7.84e-08
724 2.32e-07
725 1.53e-07
730 7.84e-08
731 7.84e-08
732 1.53e-07
733 1.53e-07
734 1.53e-07
735 1.53e-07
736 1.53e-07
737 3.90e-07
738 3.90e-07
1592 7.84e-08
1612 7.84e-08
1613 2.32e-07
1614 2.32e-07
 
0
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20
25

Time 1280.5 secs.

Motif 14

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Summary

Sequence Logo

E-value 7.4e-030
Width 5
Sites 37
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

RSGKC

Further Analysis

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Data Formats

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     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1630 18 2.87e-06 CDKDCTSRKY RSGKC INNACKCYPY
1624 17 2.87e-06 CNRKCCPGGC RSGKC INGKCQCY
1623 17 2.87e-06 CNRKCCAGGC RSGKC INGKCQCY
1022 25 2.87e-06 LMYDCCTGSC RSGKC TRG
400 10 2.87e-06 CKSKGSKAA RSGKC
382 22 2.87e-06 MYDCCSGSCG RSGKC
381 22 2.87e-06 SYDCCSGSCG RSGKC
371 21 2.87e-06 LMYDCCTGSC RSGKC TRNGLPG
370 21 2.87e-06 LMYDCCTGSC RSGKC TRNG
369 21 2.87e-06 LMYDCCTGSC RSGKC G
368 21 2.87e-06 LMYDCCTGSC RSGKC
364 21 2.87e-06 LMYACCTGSC RSGKC
363 21 2.87e-06 LMFDCCTGSC RSGKC
362 21 2.87e-06 LAYDCCTGSC RSGKC
361 21 2.87e-06 AMYDCCTGSC RSGKC
359 21 2.87e-06 LMYDCCTGSC RSGKC
358 21 2.87e-06 LMYDCCTGSC RSGKC
357 21 2.87e-06 TSYDCCTGSC RSGKC
356 10 2.87e-06 CKGKGAKCC RSGKC
354 10 2.87e-06 CKGKGAKAA RSGKC
351 21 2.87e-06 LMYDCCTGSC RSGKC
349 21 2.87e-06 LMYDCCTGSC RSGKC G
348 21 2.87e-06 LMYDCCTGSC RSGKC
347 21 2.87e-06 LLYDCCTGSC RSGKC
346 21 2.87e-06 LMYDCCTGSC RSGKC
343 21 2.87e-06 IAYNCCTGSC RSGKC
307 7 2.87e-06 CCTGSC RSGKC
180 21 2.87e-06 LMYDCCTGSC RSGKC
179 21 2.87e-06 LMYDCCTGSC RSGKC
172 18 2.87e-06 CDKDCKRRGY RSGKC INNACKCYPY
459 21 5.62e-06 TSYDCCTGSC RSGRC
458 21 5.62e-06 TSYDCCTGSC RSGRC
457 21 5.62e-06 TMYNCCSGSC RSGRC
404 21 5.62e-06 TPYDCCTGSC RSGRC
376 21 5.62e-06 TSYGCCTGSC RSGRC
375 21 5.62e-06 TMYDCCRGSC RSGRC
942 13 7.98e-06 CPPWCVGARC RAGKC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
172 2.87e-06
179 2.87e-06
180 2.87e-06
307 2.87e-06
343 2.87e-06
346 2.87e-06
347 2.87e-06
348 2.87e-06
349 2.87e-06
351 2.87e-06
354 2.87e-06
356 2.87e-06
357 2.87e-06
358 2.87e-06
359 2.87e-06
361 2.87e-06
362 2.87e-06
363 2.87e-06
364 2.87e-06
368 2.87e-06
369 2.87e-06
370 2.87e-06
371 2.87e-06
375 5.62e-06
376 5.62e-06
381 2.87e-06
382 2.87e-06
400 2.87e-06
404 5.62e-06
457 5.62e-06
458 5.62e-06
459 5.62e-06
942 7.98e-06
1022 2.87e-06
1623 2.87e-06
1624 2.87e-06
1630 2.87e-06
 
0
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30

Time 1358.5 secs.

Motif 15

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Summary

Sequence Logo

E-value 1.7e-026
Width 5
Sites 21
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

ECVKH

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1620 27 3.50e-07 LLGKCIGVKC ECVKH
1619 27 3.50e-07 LLGKCIGDKC ECVKH
1618 27 3.50e-07 LLGKCIGVKC ECVKH
1589 27 3.50e-07 LLGKCIGVKC ECVKH
171 27 3.50e-07 LLGKCIGVKC ECVKH
170 27 3.50e-07 LLGKCMNGKC ECVKH
168 27 3.50e-07 LLGKCIGDKC ECVKH
167 27 3.50e-07 LLGKCIGDKC ECVKH
166 27 3.50e-07 LLGKCIGDKC ECVKH
165 27 3.50e-07 LLGKCIGDKC ECVKH
121 27 3.50e-07 LLGKCIGDKC ECVKH
117 27 3.50e-07 LLGKCIGDKC ECVKH
116 27 3.50e-07 LLGKCIGDKC ECVKH
115 27 3.50e-07 LLGKCIGDKC ECVKH
114 27 3.50e-07 LLGKCIGDKC ECVKH
113 27 3.50e-07 LLGKCIGDKC ECVKH
112 27 3.50e-07 LLGKCIGDKC ECVKH
1336 9 8.67e-07 PPGCCNNP ACVKH RCG
1332 8 8.67e-07 PGCCNNP ACVKH RCG
146 9 8.67e-07 APGCCNNP ACVKH RC
118 27 1.32e-06 LLGKCMGKKC RCVKH

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
112 3.50e-07
113 3.50e-07
114 3.50e-07
115 3.50e-07
116 3.50e-07
117 3.50e-07
118 1.32e-06
121 3.50e-07
146 8.67e-07
165 3.50e-07
166 3.50e-07
167 3.50e-07
168 3.50e-07
170 3.50e-07
171 3.50e-07
1332 8.67e-07
1336 8.67e-07
1589 3.50e-07
1618 3.50e-07
1619 3.50e-07
1620 3.50e-07
 
0
5
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25
30

Time 1437.3 secs.

Motif 16

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Summary

Sequence Logo

E-value 3.9e-023
Width 5
Sites 11
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

QK[WF][ML]W

Further Analysis

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Data Formats

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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1740 3 5.16e-09 YC QKWMW TCDSKRKCCE
1739 3 5.16e-09 YC QKWMW TCDSERKCCE
1738 3 5.16e-09 YC QKWMW TCDSERKCCE
1737 3 5.16e-09 YC QKWMW TCDSARKCCE
1736 3 5.16e-09 YC QKWMW TCDEERKCCE
1735 3 5.16e-09 YC QKWMW TCDEERKCCE
1734 3 5.16e-09 YC QKWMW TCDEERKCCE
1733 3 3.12e-08 YC QKWLW TCDSERKCCE
1732 3 1.23e-07 YC QKFLW TCDTERKCCE
1731 3 1.23e-07 YC QKFLW TCDTERKCCE
696 3 8.88e-07 EC GKFMW KCKNSNDCCK

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
696 8.88e-07
1731 1.23e-07
1732 1.23e-07
1733 3.12e-08
1734 5.16e-09
1735 5.16e-09
1736 5.16e-09
1737 5.16e-09
1738 5.16e-09
1739 5.16e-09
1740 5.16e-09
 
0
5
10
15
20
25
30

Time 1494.7 secs.

Motif 17

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Summary

Sequence Logo

E-value 3.3e-028
Width 5
Sites 24
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

SLGLL

Further Analysis

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Data Formats

View the motif in PSPM Format 
     PSSM Format 
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Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1620 14 6.46e-07 NLRRCQLSCR SLGLL GKCIGVKCEC
1619 14 6.46e-07 NLRRCQLSCR SLGLL GKCIGDKCEC
1618 14 6.46e-07 NLRMCQLSCR SLGLL GKCIGVKCEC
1589 14 6.46e-07 NLRRCQLSCR SLGLL GKCIGVKCEC
171 14 6.46e-07 NLRRCQLSCR SLGLL GKCIGVKCEC
170 14 6.46e-07 NLKRCQLSCR SLGLL GKCMNGKCEC
169 14 6.46e-07 NLKRCQLSCR SLGLL GKCIGDKCEC
168 14 6.46e-07 NLKRCQLSCA SLGLL GKCIGDKCEC
167 14 6.46e-07 NLKRCPLSCR SLGLL GKCIGDKCEC
166 14 6.46e-07 NLARCQLSCR SLGLL GKCIGDKCEC
165 14 6.46e-07 NLARCQLSCA SLGLL GKCIGDKCEC
121 14 6.46e-07 NLRRCQLSCR SLGLL GKCIGDKCEC
120 14 6.46e-07 NLRRCELSCR SLGLL GKCIGEECKC
119 14 6.46e-07 NLRRCELSCR SLGLL GKCIGEECKC
118 14 6.46e-07 NLRMCQLSCR SLGLL GKCMGKKCRC
117 14 6.46e-07 NLRMCQLSCR SLGLL GKCIGDKCEC
116 14 6.46e-07 NLRLCQLSCR SLGLL GKCIGDKCEC
115 14 6.46e-07 NLRKCQLSCR SLGLL GKCIGDKCEC
114 14 6.46e-07 NLMRCQLSCR SLGLL GKCIGDKCEC
113 14 6.46e-07 NLLMCQLSCR SLGLL GKCIGDKCEC
112 14 6.46e-07 NLKMCQLSCR SLGLL GKCIGDKCEC
1199 17 8.62e-07 LPRDTFCALP QLGLL CCSGRCLLFC
1094 5 1.57e-06 ILGT ILGLL KSL
1250 8 2.00e-06 MNYLVFF SLALL VMTGRTVTRE

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
112 6.46e-07
113 6.46e-07
114 6.46e-07
115 6.46e-07
116 6.46e-07
117 6.46e-07
118 6.46e-07
119 6.46e-07
120 6.46e-07
121 6.46e-07
165 6.46e-07
166 6.46e-07
167 6.46e-07
168 6.46e-07
169 6.46e-07
170 6.46e-07
171 6.46e-07
1094 1.57e-06
1199 8.62e-07
1250 2.00e-06
1589 6.46e-07
1618 6.46e-07
1619 6.46e-07
1620 6.46e-07
 
0
5
10
15
20
25
30

Time 1572.7 secs.

Motif 18

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Summary

Sequence Logo

E-value 1.3e-022
Width 5
Sites 36
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

SYPPC

Further Analysis

Submit this motif to  
      
      
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Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
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     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1752 5 1.75e-06 YGCC SYPPC FATNSDYC
1254 8 1.75e-06 MTIKGCC SYPPC FATNPDCGRR
1223 8 1.75e-06 LTIKGCC SYPPC FATNPDCGRR
991 5 1.75e-06 GGCC SYPPC IANNPLC
990 5 1.75e-06 GGCC SYPPC AVSNPQHC
896 4 1.75e-06 GCC SYPPC NVSYPEICG
895 4 1.75e-06 GCC SYPPC FATNSGYC
894 4 1.75e-06 GCC SYPPC FATNSDYC
893 4 1.75e-06 GCC SYPPC FATNSDC
892 4 1.75e-06 GCC SYPPC FATNPDCGGA
891 4 1.75e-06 GCC SYPPC FATNPDCGGA
890 4 1.75e-06 GCC SYPPC FATNPDCGGA
889 4 1.75e-06 GCC SYPPC FATNPDCGGA
888 4 1.75e-06 GCC SYPPC FATNPDCGGA
887 4 1.75e-06 GCC SYPPC FATNPDCGAG
886 4 1.75e-06 GCC SYPPC FATNPDCAGG
885 4 1.75e-06 GCC SYPPC FATNPDCAGG
884 4 1.75e-06 GCC SYPPC FATNPDCAGA
883 4 1.75e-06 GCC SYPPC FATNPDCAG
882 4 1.75e-06 GCC SYPPC FATNPDCA
881 4 1.75e-06 GCC SYPPC FATNPDC
304 3 1.75e-06 CC SYPPC NVSYPEICG
79 4 1.75e-06 ACC SYPPC NVNYPEICGG
898 4 2.84e-06 GCC TYPPC AVLSPLCD
1372 5 4.37e-06 QGCC SYPAC AVSNPDICGG
1368 5 4.37e-06 QECC SYPAC NLDHPELC
654 5 4.37e-06 DPCC SYPAC GANHPEICG
1258 8 8.40e-06 MTVRECC SQPPC RWKHPELCS
1224 8 8.40e-06 LTVRECC SQPPC RWKHPELCS
863 4 8.40e-06 GCC SLPPC ALSNPDYC
862 4 8.40e-06 GCC SLPPC ALNNPDYC
861 4 8.40e-06 GCC SLPPC AASNPDYC
860 4 8.40e-06 GCC SLPPC AANNPDYC
1490 6 1.10e-05 SATCC NYPPC YETYPESCL
1079 12 1.10e-05 AMAISSGACC AYPPC FEAYPERCL
1411 5 1.34e-05 QSCC STPPC ALLYMEMC

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
79 1.75e-06
304 1.75e-06
654 4.37e-06
860 8.40e-06
861 8.40e-06
862 8.40e-06
863 8.40e-06
881 1.75e-06
882 1.75e-06
883 1.75e-06
884 1.75e-06
885 1.75e-06
886 1.75e-06
887 1.75e-06
888 1.75e-06
889 1.75e-06
890 1.75e-06
891 1.75e-06
892 1.75e-06
893 1.75e-06
894 1.75e-06
895 1.75e-06
896 1.75e-06
898 2.84e-06
990 1.75e-06
991 1.75e-06
1079 1.10e-05
1223 1.75e-06
1224 8.40e-06
1254 1.75e-06
1258 8.40e-06
1368 4.37e-06
1372 4.37e-06
1411 1.34e-05
1490 1.10e-05
1752 1.75e-06
 
0
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25

Time 1651.5 secs.

Motif 19

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Summary

Sequence Logo

E-value 1.2e-025
Width 5
Sites 40
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

T[HP][PS]GG

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1257 6 4.82e-07 MTMGC THPGG ACGGHYHCCS
1256 6 4.82e-07 MTMGC THPGG ACAGHHHCCS
924 3 4.82e-07 GC THPGG ACGGHHHCCS
498 2 4.82e-07 C THPGG ACGGHSHCCS
497 2 4.82e-07 C THPGG ACGGHHHCCS
496 2 4.82e-07 C THPGG ACGGHHHCCS
495 2 4.82e-07 C THPGG ACGGHHHCCS
494 2 4.82e-07 C THPGG ACGGHHHCCS
493 2 4.82e-07 C THPGG ACGGHHHCCS
492 2 4.82e-07 C THPGG ACGFYYHCCS
927 3 1.75e-06 GC TPPGG ACGGHAHCCS
926 3 1.75e-06 GC TPPGG ACGGHAHCCS
728 3 1.75e-06 EC TPPGG ACYYHSQCCG
727 3 1.75e-06 EC TPPGG ACNIHPHCCE
596 3 1.75e-06 DC TPPGG ACGFYYHCCS
595 3 1.75e-06 DC TPPGG ACGFYYHCCS
594 3 1.75e-06 DC TPPGG ACGFYYHCCS
511 2 1.75e-06 C TPPGG YCYHPDPCCS
510 2 1.75e-06 C TPPGG YCYHPDPCCS
509 2 1.75e-06 C TPPGG SCGGHAHCCS
508 2 1.75e-06 C TPPGG ACGVYYHCCS
1592 1 2.26e-06 THSGG ACNSHDQCCN
725 3 2.26e-06 EC THSGG ACNSHTQCCD
724 3 2.26e-06 EC THSGG ACNSHNQCCN
723 3 2.26e-06 EC THSGG ACNSHDQCCN
722 3 2.26e-06 EC THSGG ACNSHDQCCN
721 3 2.26e-06 EC THSGG ACNSHDQCCN
519 2 3.60e-06 C TPSGG ACYYDYFCCS
518 2 3.60e-06 C TPSGG ACYVASTCCS
517 2 3.60e-06 C TPSGG ACGFYYHCCS
729 3 4.57e-06 EC TRPGG ACYYDSHCCR
489 2 5.45e-06 C TDPGG ACGNPGHCCS
487 2 6.55e-06 C TAPGG ACYADNTCCS
486 2 6.55e-06 C TAPGG ACYAAYTCCS
1612 1 8.31e-06 TRSGG ACNSHDQCCI
525 2 9.65e-06 C TSPGG ACYSASTCCS
720 3 1.06e-05 EC TDSGG ACNSHDQCCN
503 2 1.25e-05 C TPAGG ACDATTECCI
1606 1 1.45e-05 TPPAG PDVGPR
1268 23 6.11e-05 PCCAGLSCVG SRPGG LCQYD

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
486 6.55e-06
487 6.55e-06
489 5.45e-06
492 4.82e-07
493 4.82e-07
494 4.82e-07
495 4.82e-07
496 4.82e-07
497 4.82e-07
498 4.82e-07
503 1.25e-05
508 1.75e-06
509 1.75e-06
510 1.75e-06
511 1.75e-06
517 3.60e-06
518 3.60e-06
519 3.60e-06
525 9.65e-06
594 1.75e-06
595 1.75e-06
596 1.75e-06
720 1.06e-05
721 2.26e-06
722 2.26e-06
723 2.26e-06
724 2.26e-06
725 2.26e-06
727 1.75e-06
728 1.75e-06
729 4.57e-06
924 4.82e-07
926 1.75e-06
927 1.75e-06
1256 4.82e-07
1257 4.82e-07
1268 6.11e-05
1592 2.26e-06
1606 1.45e-05
1612 8.31e-06
 
0
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30

Time 1709.8 secs.

Motif 20

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Summary

Sequence Logo

E-value 2.2e-022
Width 5
Sites 37
show more
PNG LOGOS require CONVERT from ImageMagick; see MEME installation guide
Standard

Download LOGO
   Orientation:    SSC:    Format:    Width: cm    Height: cm   

Regular expression

S[DN]P[RV]C

Further Analysis

Submit this motif to  
      
      
 Mouse-over buttons for more information.

Data Formats

View the motif in PSPM Format 
     PSSM Format 
     BLOCKS Format 
     FASTA Format 
     Raw Format 
     or Hide

Sites

Click on any row to highlight sequence in all motifs.

Name Start p-value Sites
1626 8 1.93e-06 TVREACC SDPRC SGQHQEKC
1625 8 1.93e-06 TVRDACC SDPRC SGKHQDLC
1542 23 1.93e-06 IAQHAIRGCC SDPRC RYRCR
1541 23 1.93e-06 IAQHAIRGCC SDPRC KHQCG
1329 5 1.93e-06 PECC SDPRC NSTHPELCG
1259 9 1.93e-06 MTVREECC SDPRC SVGHQDMCR
1225 9 1.93e-06 LTVREECC SDPRC SVGHQDMCR
1122 8 1.93e-06 IVRRGCC SDPRC AWRCG
841 4 1.93e-06 GCC SDPRC RYRCR
840 4 1.93e-06 GCC SDPRC RYRC
839 4 1.93e-06 GCC SDPRC RWRCR
838 4 1.93e-06 GCC SDPRC NYDHPEICGG
837 4 1.93e-06 GCC SDPRC NMNNPDYC
836 4 1.93e-06 GCC SDPRC KHQC
835 4 1.93e-06 GCC SDPRC KHEC
834 4 1.93e-06 GCC SDPRC AYRCR
833 4 1.93e-06 GCC SDPRC AWRC
783 26 1.93e-06 IAQVVRGGCC SDPRC AWRCG
745 5 1.93e-06 EGCC SDPRC SGKHQDLCS
625 5 1.93e-06 DECC SDPRC AVKHQDLC
13 20 1.93e-06 MKRTVREACC SDPRC SGQHQEKCG
12 20 1.93e-06 MKRTVRDACC SDPRC SGKHQDLCG
9 20 1.93e-06 MELTVREGCC SDPRC SGKHQDLCS
8 20 1.93e-06 MELTVRDECC SDPRC AVKHQDLCG
1751 5 6.79e-06 YGCC SNPVC HLEHSNLC
876 4 6.79e-06 GCC SNPVC WQNNAEYCRE
875 4 6.79e-06 GCC SNPVC HVEHSYMC
874 4 6.79e-06 GCC SNPVC HLEHSNMC
873 4 6.79e-06 GCC SNPVC HLEHSNLCTN
872 4 6.79e-06 GCC SNPVC HLEHSNLCGG
871 4 6.79e-06 GCC SNPVC HLEHSNLCGA
870 4 6.79e-06 GCC SNPVC HLEHSNLC
869 4 6.79e-06 GCC SNPVC FATHSNLC
277 3 6.79e-06 CC SNPVC HLEHSNLCTN
159 11 6.79e-06 ASDAAHQGCC SNPVC HVEHPELC
830 4 8.81e-06 GCC SDPKC RYRCR
843 4 1.04e-05 GCC SEPRC RYRCR

Block Diagrams

The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. Mouse over the center of the motif blocks to see more information.

Name Lowest p-value Motif Location
8 1.93e-06
9 1.93e-06
12 1.93e-06
13 1.93e-06
159 6.79e-06
277 6.79e-06
625 1.93e-06
745 1.93e-06
783 1.93e-06
830 8.81e-06
833 1.93e-06
834 1.93e-06
835 1.93e-06
836 1.93e-06
837 1.93e-06
838 1.93e-06
839 1.93e-06
840 1.93e-06
841 1.93e-06
843 1.04e-05
869 6.79e-06
870 6.79e-06
871 6.79e-06
872 6.79e-06
873 6.79e-06
874 6.79e-06
875 6.79e-06
876 6.79e-06
1122 1.93e-06
1225 1.93e-06
1259 1.93e-06
1329 1.93e-06
1541 1.93e-06
1542 1.93e-06
1625 1.93e-06
1626 1.93e-06
1751 6.79e-06
 
0
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20
25
30
35

Time 1788.1 secs.

All Motifs

 Top

Combined Block Diagrams

Non-overlapping sites with a p-value better than 0.0001.
The height of the motif "block" is proportional to -log(p-value), truncated at the height for a motif with a p-value of 1e-10.
Click on any row to highlight sequence in all motifs. The motif blocks have tool tips with more information.

Motif 1
Motif 2
Motif 3
Motif 4
Motif 5
Motif 6
Motif 7
Motif 8
Motif 9
Motif 10
Motif 11
Motif 12
Motif 13
Motif 14
Motif 15
Motif 16
Motif 17
Motif 18
Motif 19
Motif 20
Name Combined p-value Motif Location
4 4.80e-07
5 7.23e-07
6 1.68e-07
7 4.30e-07
8 3.10e-13
9 1.45e-13
10 4.69e-07
11 1.20e-06
12 7.73e-12
13 1.72e-10
14 1.27e-05
15 4.97e-11
16 1.90e-10
17 4.70e-10
18 1.75e-09
19 5.75e-09
20 1.98e-08
21 1.76e-10
22 4.57e-10
23 1.32e-09
24 3.32e-09
25 3.19e-11
26 8.44e-11
27 3.84e-11
28 9.02e-11
29 1.18e-15
30 5.16e-15
31 6.53e-11
32 7.22e-09
33 6.17e-11
34 1.01e-10
35 1.34e-09
36 2.16e-09
37 7.63e-11
38 1.22e-07
39 1.86e-07
40 3.52e-07
41 3.84e-10
42 1.05e-05
43 6.69e-07
44 3.14e-05
45 2.11e-06
46 1.01e-04
47 2.25e-04
48 1.96e-04
49 4.68e-04
50 5.19e-18
51 1.32e-17
52 2.86e-13
53 1.23e-13
54 9.54e-12
55 9.33e-10
56 3.45e-05
57 8.32e-05
58 3.38e-05
59 8.25e-05
60 6.44e-05
61 9.60e-05
62 3.12e-12
63 2.26e-12
64 2.91e-08
65 1.80e-08
66 4.41e-08
67 5.76e-08
68 3.47e-08
69 1.38e-11
70 5.76e-19
71 8.65e-19
72 7.30e-17
73 9.63e-10
74 2.15e-14
78 1.52e-09
79 2.33e-04
84 8.07e-02
94 5.00e-01
97 5.92e-09
107 2.95e-09
112 5.52e-04
113 2.10e-04
114 1.13e-03
115 1.72e-03
116 7.66e-04
117 5.82e-04
118 8.69e-04
119 4.82e-02
120 1.59e-01
121 1.69e-03
128 1.49e-12
129 1.59e-17
130 1.59e-17
133 7.80e-03
146 5.74e-06
155 9.72e-09
157 9.00e-07
159 5.64e-09
162 8.25e-06
165 1.03e-03
166 8.75e-04
167 1.33e-03
168 1.27e-03
169 1.14e-02
170 3.86e-04
171 1.67e-03
172 8.37e-02
173 1.46e-05
174 1.87e-02
175 1.46e-03
179 8.53e-06
180 5.64e-05
218 6.84e-04
219 7.45e-07
220 2.82e-04
221 3.33e-04
222 1.53e-04
223 7.62e-04
224 1.18e-02
273 8.83e-05
276 6.42e-10
277 4.96e-07
304 1.49e-04
307 3.48e-01
321 2.80e-01
322 2.48e-01
330 2.18e-01
334 7.85e-01
343 2.33e-02
346 3.40e-06
347 3.44e-05
348 1.07e-06
349 4.29e-07
350 1.03e-03
351 6.73e-07
352 1.60e-04
353 7.30e-02
354 4.55e-05
355 7.82e-07
356 2.40e-02
357 6.36e-04
358 8.92e-06
359 1.41e-05
360 7.43e-02
361 8.55e-05
362 2.00e-04
363 8.36e-06
364 2.57e-05
365 2.78e-05
366 6.87e-06
367 2.19e-05
368 7.76e-06
369 2.71e-06
370 1.31e-06
371 9.52e-07
372 7.30e-05
373 2.61e-05
374 4.25e-02
375 6.35e-05
376 1.16e-02
377 8.43e-03
378 2.19e-04
379 4.98e-04
380 9.72e-02
381 1.01e-02
382 1.32e-04
388 9.96e-06
389 9.34e-05
390 1.36e-03
391 4.66e-04
392 7.99e-06
393 1.70e-05
394 2.41e-05
395 3.92e-05
396 1.48e-03
397 6.94e-05
398 4.26e-06
399 1.76e-05
400 2.00e-04
404 1.41e-02
405 1.23e-01
407 7.00e-03
408 4.53e-04
410 2.44e-01
412 2.16e-01
413 1.73e-01
416 8.09e-02
417 7.54e-02
419 1.25e-01
436 5.39e-01
441 4.36e-02
456 2.65e-02
457 1.17e-03
458 1.81e-02
459 3.32e-02
466 2.96e-01
467 4.21e-01
470 4.64e-05
474 2.60e-01
478 1.06e-02
484 1.08e-02
486 1.55e-01
487 8.38e-02
488 1.00e-01
489 2.68e-02
492 9.72e-03
493 6.33e-05
494 7.53e-05
495 7.65e-05
496 3.62e-04
497 7.47e-03
498 2.25e-04
503 7.21e-02
506 8.59e-02
507 2.62e-01
508 5.39e-02
509 5.06e-02
510 1.78e-02
511 1.93e-02
512 3.00e-02
517 1.26e-02
518 8.13e-03
519 1.63e-02
525 2.23e-01
530 8.60e-01
536 1.09e-01
537 1.44e-01
538 4.01e-01
539 3.31e-01
540 3.38e-01
541 1.55e-01
542 2.23e-01
544 1.29e-03
545 3.13e-03
546 2.26e-03
573 5.48e-01
585 2.22e-01
593 9.79e-02
594 6.50e-02
595 6.50e-02
596 9.54e-02
598 2.77e-01
599 1.45e-01
600 2.43e-02
603 6.93e-05
604 1.39e-04
606 1.45e-01
617 1.66e-01
619 6.14e-02
625 1.63e-06
626 9.51e-08
627 4.65e-07
628 2.15e-08
629 2.00e-08
630 1.48e-07
631 5.21e-08
632 8.95e-05
640 9.24e-10
641 4.68e-09
643 1.52e-02
644 5.10e-02
645 4.45e-02
649 2.84e-06
650 9.91e-06
653 2.19e-09
654 4.41e-11
659 4.91e-10
669 1.66e-01
670 1.22e-01
674 9.08e-06
680 1.59e-06
681 6.81e-04
688 1.22e-12
689 1.36e-09
690 4.28e-11
696 2.05e-02
698 6.17e-01
720 6.48e-06
721 5.10e-07
722 1.03e-06
723 8.69e-07
724 2.34e-06
725 1.36e-06
726 6.95e-02
727 4.55e-05
728 5.57e-03
729 7.98e-02
730 8.47e-08
731 2.38e-07
732 2.37e-07
733 3.15e-07