OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 57001::58842 AT 349 1.000
AT 58895::60826 AT 354 1.000
AT 61375::67000 AT 1043 1.000
View Window Spectrum for 3 mer
TTT 57001::57341 TTT 24 1.000
TAT 58126::64693 TAT 453 1.000
TAT 65755::67000 TAT 92 1.000
View Window Spectrum for 4 mer
TTAT 57001::57570 TTAT 81 0.772
TATT 57785::58396 TATT 100 0.810
ATAA 58453::59752 ATAA 163 0.782
TAAT 60740::61538 TAAT 111 0.795
TTAT 61539::64848 TTAT 387 0.803
ATAT 64907::66431 ATAT 211 0.844
View Window Spectrum for 5 mer
AATAT 57126::57768 AATAT 55 0.836
ATATT 57953::58955 ATATT 75 0.848
ATATT 59176::61191 ATATT 162 0.835
AATAT 61506::63805 AATAT 156 0.826
ATATT 64685::65412 ATATT 75 0.843
TTTAT 65665::66538 TTTAT 65 0.825
View Window Spectrum for 6 mer
AAATAT 57177::57833 AAATAT 36 0.847
TATATT 57889::58512 TATATT 46 0.866
AAATAT 58766::59549 AAATAT 36 0.866
ATATAA 60030::60793 ATATAA 37 0.869
TTTTAT 61081::61698 TTTTAT 36 0.856
TATATT 63703::64914 TATATT 56 0.845
ATATTT 65359::66985 ATATTT 82 0.868
View Window Spectrum for 7 mer
ATATTTT 57001::57496 ATATTTT 16 0.866
TATATAT 58153::58819 TATATAT 20 0.914
ATTTATA 59898::60692 ATTTATA 27 0.862
TAAATAT 61929::62548 TATATAT 25 0.880
TTAATAT 62735::63937 TTAATAT 23 0.863
ATATATT 64309::65148 ATATATT 30 0.876
View Window Spectrum for 8 mer
AAATAAAT 58412::59327 AAATAAAT 36 0.788
ATTTATAT 59635::60313 ATTTATAT 37 0.804
AATTTTAT 60517::61290 AATTTTAT 41 0.774
TATTTTAA 63047::64102 TATTTTAA 40 0.784
AATTTATA 64385::65141 AATTTATA 42 0.795
AATATTTA 65328::66789 AATATTTA 68 0.781
View Window Spectrum for 9 mer
ATTTTTTAT 57001::57482 ATTTTTTAT 16 0.813
ATTTATATT 57729::58376 ATTTATATT 27 0.802
ATTTATATT 59563::61215 ATTTATATT 58 0.807
TATTTTTAT 61253::61888 TATTTTTAT 23 0.821
TTTAAATAT 62686::63415 TTTAAATAT 18 0.802
TATATAATA 65233::65931 TATATAATA 28 0.833
ATATTTTTT 66218::66932 ATATTTTTT 22 0.813
View Window Spectrum for 10 mer
AAATATTTAT 57794::59528 AAATATTTAT 39 0.813
TATTTTTATA 59529::60643 TATTTTTATA 29 0.817
TAATATTATT 60662::61762 TAATATTATT 28 0.839
ATTAAATATA 62270::63744 ATTAAATATA 22 0.841
TTATATATAT 63855::64517 TTATATATAT 10 0.830
AAATATATAA 64612::65510 AAATATATAA 38 0.868