OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 351501::358321 AT 1278 1.000
AT 358483::360425 AT 294 1.000
TT 360667::361467 TT 125 1.000
View Window Spectrum for 3 mer
ATA 352441::355736 ATA 236 1.000
ATT 356357::361500 ATT 328 1.000
View Window Spectrum for 4 mer
ATAT 351747::352370 ATAT 96 0.880
ATAT 352833::353941 ATAT 129 0.837
TTAT 354336::354986 TTAT 93 0.790
AATA 355049::357687 AATA 331 0.807
TATT 357750::358920 TATT 141 0.807
TCAT 358988::359635 TCAT 70 0.793
TCAT 360158::361255 TCAT 136 0.779
View Window Spectrum for 5 mer
TATAA 352212::353317 TATAA 84 0.831
ATAAA 353380::354968 ATAAA 116 0.831
AATAT 355154::357497 AATAT 170 0.825
TTATT 357920::358549 TTATT 49 0.833
ATTTT 359588::360204 ATTTT 49 0.824
TTATT 360400::361398 TTATT 73 0.844
View Window Spectrum for 6 mer
TATAAA 352185::352970 TATAAA 54 0.846
ATAAAT 353378::354046 ATATAT 36 0.847
AATAAA 356554::357388 AATAAA 42 0.885
ATATTT 357389::358029 ATATTT 35 0.857
TTTCAT 358085::359137 TTTCAT 37 0.847
ATTTTT 359283::360215 ATTTTT 45 0.848
View Window Spectrum for 7 mer
TATATAA 351675::352539 TATATAA 40 0.889
ATATATT 353763::354461 ATATATT 17 0.866
TTTATAT 354724::355435 TTTATAT 27 0.868
ATATATA 355437::356565 ATATATA 41 0.913
TATTTTT 357311::359087 TATTTTT 41 0.871
CATTATT 359450::360066 CATTATT 16 0.866
ATTTTTT 360849::361500 ATTTTTT 18 0.873
View Window Spectrum for 8 mer
AATATAAA 351501::353206 AATATAAA 96 0.786
AAATATAA 353872::354657 AAATATAA 38 0.783
ATTTATAA 354692::356984 ATTTATAA 116 0.777
ATATTTTT 357587::359949 ATATTTTT 95 0.782
TTTTTCAT 360647::361274 TTTTTCAT 26 0.784
View Window Spectrum for 9 mer
TATAAATAA 352244::352883 TATAAATAA 27 0.811
TTAATATAT 353610::355439 TTAATATAT 59 0.795
AAATAAATA 355804::357295 AAATAAATA 48 0.794
TTATTATTT 358009::358979 TTATTATTT 25 0.813
TATTTTTAT 359836::361500 TATTTTTAT 59 0.804
View Window Spectrum for 10 mer
ATAAATAAAT 355601::356244 ATAAATAAAT 20 0.810
ATATATATAT 356637::357259 ATATATATAT 15 0.827
ATTTTCATTA 357846::359431 ATTTTCATTA 21 0.819
TTATTTTTAT 359514::361500 TTATTTTTAT 44 0.816