OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 313501::315395 AT 350 1.000
AA 315691::316406 AA 116 1.000
AT 316566::323492 AT 1248 1.000
View Window Spectrum for 3 mer
ATA 313603::318862 ATA 372 1.000
TAT 318890::319986 TAT 91 1.000
TAT 320140::320791 TAT 55 1.000
ATA 321070::322665 ATA 127 1.000
TAT 322699::323500 TAT 56 1.000
View Window Spectrum for 4 mer
TATT 313588::314410 TATT 125 0.780
AATA 315626::317295 AATA 199 0.800
TATT 319647::320573 TATT 115 0.802
ATAA 320779::322386 ATAA 204 0.795
ATTT 322881::323498 ATTT 61 0.799
View Window Spectrum for 5 mer
ATAAA 314740::315819 ATAAA 82 0.844
AAATA 316522::317149 AAATA 34 0.835
ATATT 318102::318882 ATATT 61 0.833
TATTT 319302::319915 TATTT 47 0.843
TTTAT 319919::321067 TTTAT 95 0.851
ATATT 321144::321757 ATATT 48 0.846
TTTAT 322558::323496 TTTAT 70 0.843
View Window Spectrum for 6 mer
ATATAA 314219::315035 ATATAt/a 50 0.857
AAATAT 315526::316251 AAATAT 35 0.848
TAGAAA 316462::317146 TAGAAA 23 0.841
ATTTAT 318271::318888 ATTTAT 35 0.843
ATTTAT 319192::319821 ATTTAT 28 0.869
TATTTA 320448::321093 TATTTA 40 0.846
ATATAT 321427::322040 ATATAT 30 0.900
View Window Spectrum for 7 mer
TAATAAA 315280::316035 TAATAAA 21 0.884
AAATATA 317383::318318 AAATATA 32 0.879
ATATATT 321110::321787 ATATATt/a 24 0.875
TATTTAT 322379::323031 TATTTAT 28 0.883
View Window Spectrum for 8 mer
TTTTCTAT 313864::314565 TTTTCTAT 35 0.793
AATATAAA 315461::317317 AATATAAA 78 0.782
AATATAAA 317652::318300 AATATAAA 40 0.769
ATTTATAT 318542::319515 ATTTATAT 46 0.799
TTTTATAT 319627::320436 TTTTATAT 40 0.784
TATATTTT 320764::322588 TATATTTT 90 0.790
ATATTTTT 322616::323260 ATATTTTT 34 0.794
View Window Spectrum for 9 mer
TTTATATTT 313685::314674 TTTTTATTT 41 0.805
TTTATATAA 314873::315496 TATATATAA 24 0.796
AAAATATAT 317480::318234 AAAATATAT 30 0.804
TATATTTTT 318743::320130 TATATTTTT 45 0.812
View Window Spectrum for 10 mer
TTTTTTTTTC 313501::314166 TTTTTTTTTT 21 0.857
ATATAAAAAA 315129::316726 ATATAAAAAA 35 0.840
ATATATTAAT 317750::318385 ATATATTAAT 15 0.820
ATATTAATAT 319258::319986 ATATTAATAT 19 0.821
AAAATATAAA 321584::322343 AAAATATAAA 14 0.821