OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 304001::314000 AT 1840 1.000
View Window Spectrum for 3 mer
ATA 304001::305771 ATA 142 1.000
ATA 306281::308076 ATA 133 1.000
ATA 308361::311901 ATA 260 1.000
TAT 312093::313406 TAT 109 1.000
View Window Spectrum for 4 mer
TTAT 304605::307169 TTAT 330 0.799
TTAT 307930::308675 TTAT 100 0.815
TATT 309162::309787 TATT 78 0.795
AATA 310852::311460 AATA 70 0.796
ATAA 311653::312660 ATAA 135 0.819
ATAT 312953::313721 ATAT 104 0.812
View Window Spectrum for 5 mer
AAATT 304001::304619 AAATT 38 0.805
TTATA 304669::305390 TTATA 62 0.835
TATAA 305392::307086 TATAA 130 0.851
AAATA 309595::311119 AAATA 120 0.823
TATTT 312588::313199 TATTT 46 0.826
View Window Spectrum for 6 mer
ATATTT 304260::305086 ATATTT 38 0.860
TTTATA 307853::308467 TTTATA 29 0.856
TTATTT 312617::313237 TTATTT 32 0.849
View Window Spectrum for 7 mer
ATAAATA 305366::306082 ATAAATA 29 0.882
ATATATT 306227::309984 ATATATT 99 0.882
TTTTTAT 312387::313260 TTTTTAT 27 0.878
View Window Spectrum for 8 mer
AATAAAAT 304001::304586 AATAAAAT 21 0.798
AATTATAT 304749::305373 AATTATAT 34 0.776
ATATTAAT 305959::307439 ATATTAAT 66 0.775
TTTTATAT 307982::308668 TTTTATAT 38 0.786
TATAAAAT 308778::309426 TATAAAAT 28 0.763
AAATATAT 310057::310760 AAATATAT 34 0.790
TTATATAT 311061::311809 TTATATAT 34 0.812
TAATATTT 312187::312905 TAATATTT 37 0.791
View Window Spectrum for 9 mer
ATTTATATT 304125::305592 ATTTATATT 51 0.791
TTTTTATAT 306213::308613 TTTTTATAT 73 0.799
ATATATTTT 309494::310147 ATATATTTT 29 0.808
ATAAAAATA 310286::311193 ATAAAAATA 30 0.815
ATATATTAA 312847::313617 ATATATTAA 27 0.807
View Window Spectrum for 10 mer
TAAATAAAAT 304001::304619 TAAATAAAAT 11 0.836
ATATATATAA 304652::305650 ATATATATAA 27 0.856
ATTTTTTAAT 306255::307079 ATTTTTTAAT 15 0.820
TATTTTTATT 307513::308381 TATTTTTATT 21 0.819
TAATATATAT 308907::309881 TAATATATAT 18 0.828
TATATAATTA 311609::312278 TATATAATTA 25 0.828
TTTTTTATTA 312308::312931 TTTTTTATTA 16 0.844
TTTTTTTTCA 313381::314000 TTTTTTTTTA 18 0.833