OUTPUT OF SPECTRAL REPEAT FINDER
View Fourier Spectrum of Entire DNA Sequence  FFT




Pattern Searched Region Consensus Copy No Score
View Window Spectrum for 2 mer
AT 228001::229707 AT 287 1.000
AT 230138::237488 AT 1357 1.000
View Window Spectrum for 3 mer
TAT 228001::228359 TAT 23 1.000
ATA 228001::228359 ATA 23 1.000
TAT 228628::231523 TAT 220 1.000
TAT 231541::232501 TAT 84 1.000
TAT 232807::234440 TAT 98 1.000
ATA 234584::235385 ATA 57 1.000
ATA 235614::236247 ATA 55 1.000
TAT 236740::238000 TAT 113 1.000
View Window Spectrum for 4 mer
TTAT 228146::230799 TTAT 343 0.811
TATT 232059::232828 TATT 93 0.828
TTAT 232892::233527 TTAT 84 0.795
TATT 234055::234830 TATT 87 0.799
AATA 234995::235786 AATA 97 0.812
ATAT 236667::237880 ATAT 159 0.852
View Window Spectrum for 5 mer
AATAT 228001::228319 AATAT 24 0.817
TATTT 229072::229690 TATTT 45 0.818
TTATA 230906::233230 TTATA 180 0.837
View Window Spectrum for 6 mer
TTTATA 230853::231470 TTTATA 37 0.869
TTTATA 232366::232982 TTTATA 35 0.848
TTTATT 233432::234343 TTTATT 34 0.868
ATAAAT 236008::236890 ATAAAT 50 0.863
AAATAT 237307::238000 AAATAT 34 0.858
View Window Spectrum for 7 mer
TTTTTAT 228001::228494 TTTTTAT 18 0.865
TTTTTAT 229852::230763 TTTTTAT 30 0.876
TATATAA 232926::233543 TATATAT 21 0.864
TTATTTT 233722::234974 TTATTTT 33 0.879
ATATAAA 235260::236890 ATATAAA 52 0.887
TATAAAT 236969::237594 TATAAAT 29 0.892
View Window Spectrum for 8 mer
TTATTTAT 228082::228868 TTATTTAT 35 0.793
TTATATAA 229407::232494 TTATATAA 142 0.777
ATATTTTT 233027::235470 ATATTTTT 96 0.790
ATATAATT 235769::236812 ATATAATT 56 0.808
View Window Spectrum for 9 mer
TTTTTATAT 228001::228911 TTTTTATAT 29 0.808
ATAATTTTT 229287::230592 ATAATTTTT 47 0.799
TTATAAATA 231082::231967 TTATAAATA 31 0.792
TTATATATA 232178::233003 TTATATATA 26 0.838
TTTTTATAT 233230::236028 TTTTTATAT 71 0.812
AAATATAAA 236141::237134 AAATATAAA 38 0.813
View Window Spectrum for 10 mer
TTATATATAT 232822::233493 TTATATATAT 17 0.865
ATATAATAAA 234541::235203 ATATAATAAA 17 0.847
ATATAATAAA 235501::236131 ATATAATAAA 16 0.850